RNA–Protein interactions for RNA: ENST00000346997.6

FGFR2-202, Transcript of fibroblast growth factor receptor 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FGFR2, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-202ENST00000346997 KDM4AO75164 1064 aa13.14□□□□□ -0.31
FGFR2-202ENST00000346997 PSME1Q06323 249 aa13.14□□□□□ -0.31
FGFR2-202ENST00000346997 C8orf58Q8NAV2 365 aa13.14□□□□□ -0.31
FGFR2-202ENST00000346997 EYA1Q99502 592 aa13.14□□□□□ -0.31
FGFR2-202ENST00000346997 RWDD1Q9H446 243 aaPredicted RBP13.14□□□□□ -0.31
FGFR2-202ENST00000346997 ZBTB47Q9UFB7 747 aaPredicted RBP13.14□□□□□ -0.31
FGFR2-202ENST00000346997 LTV1Q96GA3 475 aaPredicted RBP13.14□□□□□ -0.31
FGFR2-202ENST00000346997 IPO9Q96P70 1041 aaKnown RBP13.14□□□□□ -0.31
FGFR2-202ENST00000346997 KIF1AQ12756 1690 aa13.13□□□□□ -0.31
FGFR2-202ENST00000346997 HOXC9P31274 260 aa13.13□□□□□ -0.31
FGFR2-202ENST00000346997 FAM161AQ3B820 660 aa13.13□□□□□ -0.31
FGFR2-202ENST00000346997 IGSF1Q8N6C5 1336 aa13.12□□□□□ -0.31
FGFR2-202ENST00000346997 MARF1Q9Y4F3 1742 aaKnown RBP13.12□□□□□ -0.31
FGFR2-202ENST00000346997 NCLP19338 710 aaKnown RBP13.12□□□□□ -0.31
FGFR2-202ENST00000346997 MTHFSDQ2M296 383 aaKnown RBP13.12□□□□□ -0.31
FGFR2-202ENST00000346997 MRPL50Q8N5N7 158 aaKnown RBP13.12□□□□□ -0.31
FGFR2-202ENST00000346997 RTF1Q92541 710 aaKnown RBP13.12□□□□□ -0.31
FGFR2-202ENST00000346997 KDRP35968 1356 aa13.11□□□□□ -0.31
FGFR2-202ENST00000346997 C8orf34Q49A92 452 aa13.11□□□□□ -0.31
FGFR2-202ENST00000346997 NPHP3Q7Z494 1330 aa13.11□□□□□ -0.31
FGFR2-202ENST00000346997 TEX2Q8IWB9 1127 aa13.11□□□□□ -0.31
FGFR2-202ENST00000346997 KRT24Q2M2I5 525 aa13.1□□□□□ -0.31
FGFR2-202ENST00000346997 KRT28Q7Z3Y7 464 aa13.1□□□□□ -0.31
FGFR2-202ENST00000346997 KIF24Q5T7B8 1368 aa13.1□□□□□ -0.31
FGFR2-202ENST00000346997 PRDM10Q9NQV6 1147 aa13.1□□□□□ -0.31
FGFR2-202ENST00000346997 CHL1O00533 1208 aa13.09□□□□□ -0.31
FGFR2-202ENST00000346997 WDR70Q9NW82 654 aa13.09□□□□□ -0.31
FGFR2-202ENST00000346997 PDZRN3Q9UPQ7 1066 aa13.09□□□□□ -0.31
FGFR2-202ENST00000346997 GAS2L2Q8NHY3 880 aa13.08□□□□□ -0.31
FGFR2-202ENST00000346997 ZBTB40Q9NUA8 1239 aa13.08□□□□□ -0.31
FGFR2-202ENST00000346997 MIS18AQ9NYP9 233 aa13.08□□□□□ -0.31
FGFR2-202ENST00000346997 NHSL1Q5SYE7 1610 aa13.08□□□□□ -0.31
FGFR2-202ENST00000346997 USP54Q70EL1 1684 aa13.08□□□□□ -0.32
FGFR2-202ENST00000346997 ARHGAP45Q92619 1136 aa13.08□□□□□ -0.32
FGFR2-202ENST00000346997 GPBP1L1Q9HC44 474 aaPredicted RBP13.08□□□□□ -0.32
FGFR2-202ENST00000346997 USHBP1Q8N6Y0 703 aa13.07□□□□□ -0.32
FGFR2-202ENST00000346997 PXDNQ92626 1479 aa13.07□□□□□ -0.32
FGFR2-202ENST00000346997 PHLPP1O60346 1717 aa13.07□□□□□ -0.32
FGFR2-202ENST00000346997 LTN1O94822 1766 aa13.07□□□□□ -0.32
FGFR2-202ENST00000346997 CRB1P82279 1406 aa13.07□□□□□ -0.32
FGFR2-202ENST00000346997 PROM2Q8N271 834 aa13.06□□□□□ -0.32
FGFR2-202ENST00000346997 TSPYL4Q9UJ04 414 aa13.06□□□□□ -0.32
FGFR2-202ENST00000346997 RTL1A6NKG5 1358 aa13.06□□□□□ -0.32
FGFR2-202ENST00000346997 HDAC1Q13547 482 aaPredicted RBP13.06□□□□□ -0.32
FGFR2-202ENST00000346997 KCNH5Q8NCM2 988 aa13.06□□□□□ -0.32
FGFR2-202ENST00000346997 API5Q9BZZ5 524 aaKnown RBP13.05□□□□□ -0.32
FGFR2-202ENST00000346997 SOS2Q07890 1332 aaPredicted RBP13.05□□□□□ -0.32
FGFR2-202ENST00000346997 AHDC1Q5TGY3 1603 aaPredicted RBP13.05□□□□□ -0.32
FGFR2-202ENST00000346997 IP6K1Q92551 441 aa13.05□□□□□ -0.32
FGFR2-202ENST00000346997 TRPM3Q9HCF6 1732 aaPredicted RBP13.05□□□□□ -0.32
FGFR2-202ENST00000346997 ABCC4O15439 1325 aa13.05□□□□□ -0.32
FGFR2-202ENST00000346997 GNAT3A8MTJ3 354 aa13.04□□□□□ -0.32
FGFR2-202ENST00000346997 HSPA1LP34931 641 aa13.04□□□□□ -0.32
FGFR2-202ENST00000346997 SPOCK2Q92563 424 aa13.04□□□□□ -0.32
FGFR2-202ENST00000346997 FBXW7Q969H0 707 aa13.04□□□□□ -0.32
FGFR2-202ENST00000346997 NFAT5O94916 1531 aa13.04□□□□□ -0.32
FGFR2-202ENST00000346997 KIAA0232Q92628 1395 aa13.04□□□□□ -0.32
FGFR2-202ENST00000346997 ZBTB7BO15156 539 aaPredicted RBP13.04□□□□□ -0.32
FGFR2-202ENST00000346997 CHMP4BQ9H444 224 aaKnown RBP13.04□□□□□ -0.32
FGFR2-202ENST00000346997 COL16A1Q07092 1604 aaPredicted RBP13.03□□□□□ -0.32
FGFR2-202ENST00000346997 TNS3Q68CZ2 1445 aa13.03□□□□□ -0.32
FGFR2-202ENST00000346997 SPDYE4A6NLX3 237 aa13.02□□□□□ -0.32
FGFR2-202ENST00000346997 GCP02774 474 aa13.02□□□□□ -0.32
FGFR2-202ENST00000346997 IRF5Q13568 498 aa13.02□□□□□ -0.32
FGFR2-202ENST00000346997 SPATA31A3Q5VYP0 1347 aa13.02□□□□□ -0.32
FGFR2-202ENST00000346997 NBPF6Q5VWK0 638 aa13.02□□□□□ -0.33
FGFR2-202ENST00000346997 FBXO41Q8TF61 875 aa13.02□□□□□ -0.33
FGFR2-202ENST00000346997 LRRC59Q96AG4 307 aaKnown RBP13.02□□□□□ -0.33
FGFR2-202ENST00000346997 NBPF4Q96M43 638 aa13.02□□□□□ -0.33
FGFR2-202ENST00000346997 PLCD4Q9BRC7 762 aa13.02□□□□□ -0.33
FGFR2-202ENST00000346997 MAP3K5Q99683 1374 aa13.02□□□□□ -0.33
FGFR2-202ENST00000346997 HTATSF1O43719 755 aaKnown RBP13.01□□□□□ -0.33
FGFR2-202ENST00000346997 SMC5Q8IY18 1101 aa13.01□□□□□ -0.33
FGFR2-202ENST00000346997 CABLES1Q8TDN4 633 aa13.01□□□□□ -0.33
FGFR2-202ENST00000346997 DDRGK1Q96HY6 314 aa13.01□□□□□ -0.33
FGFR2-202ENST00000346997 ALS2Q96Q42 1657 aa13.01□□□□□ -0.33
FGFR2-202ENST00000346997 VIRMAQ69YN4 1812 aaKnown RBP13□□□□□ -0.33
FGFR2-202ENST00000346997 IL17REQ8NFR9 667 aa12.99□□□□□ -0.33
FGFR2-202ENST00000346997 ATF5Q9Y2D1 282 aaPredicted RBP12.99□□□□□ -0.33
FGFR2-202ENST00000346997 ARHGEF25Q86VW2 580 aa12.99□□□□□ -0.33
FGFR2-202ENST00000346997 RETREG2Q8NC44 543 aa12.99□□□□□ -0.33
FGFR2-202ENST00000346997 PTPRCP08575 1304 aa12.98□□□□□ -0.33
FGFR2-202ENST00000346997 SEC24BO95487 1268 aa12.98□□□□□ -0.33
FGFR2-202ENST00000346997 LNPKQ9C0E8 428 aa12.98□□□□□ -0.33
FGFR2-202ENST00000346997 LRRC37A3O60309 1634 aa12.97□□□□□ -0.33
FGFR2-202ENST00000346997 NKX1-1Q15270 411 aaPredicted RBP12.97□□□□□ -0.33
FGFR2-202ENST00000346997 INTS3Q68E01 1043 aaKnown RBP12.97□□□□□ -0.33
FGFR2-202ENST00000346997 STK31Q9BXU1 1019 aa12.97□□□□□ -0.33
FGFR2-202ENST00000346997 RGS12O14924 1447 aa12.97□□□□□ -0.33
FGFR2-202ENST00000346997 RGPD2P0DJD1 1756 aa12.97□□□□□ -0.33
FGFR2-202ENST00000346997 SLIT3O75094 1523 aa12.97□□□□□ -0.33
FGFR2-202ENST00000346997 SETQ01105 290 aaPredicted RBP12.97□□□□□ -0.33
FGFR2-202ENST00000346997 NUCB1Q02818 461 aa12.97□□□□□ -0.33
FGFR2-202ENST00000346997 TAF7Q15545 349 aaPredicted RBP12.97□□□□□ -0.33
FGFR2-202ENST00000346997 CNPY4Q8N129 248 aa12.97□□□□□ -0.33
FGFR2-202ENST00000346997 KCNV2Q8TDN2 545 aa12.97□□□□□ -0.33
FGFR2-202ENST00000346997 ANKRD24Q8TF21 1146 aa12.97□□□□□ -0.33
FGFR2-202ENST00000346997 NUTM2BA6NNL0 878 aaPredicted RBP12.96□□□□□ -0.33
FGFR2-202ENST00000346997 NUTM2EB1AL46 878 aaPredicted RBP12.96□□□□□ -0.33
FGFR2-202ENST00000346997 TRAK2O60296 914 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms