RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.89■■□□□ 1.58
CDHR4-201ENST00000343366 USHBP1Q8N6Y0 703 aa24.88■■□□□ 1.57
CDHR4-201ENST00000343366 MRS2Q9HD23 443 aa24.88■■□□□ 1.57
CDHR4-201ENST00000343366 NEFMP07197 916 aa24.87■■□□□ 1.57
CDHR4-201ENST00000343366 AMOTQ4VCS5 1084 aa24.87■■□□□ 1.57
CDHR4-201ENST00000343366 CCNL1Q9UK58 526 aaPredicted RBP24.87■■□□□ 1.57
CDHR4-201ENST00000343366 SYTL4Q96C24 671 aaPredicted RBP24.86■■□□□ 1.57
CDHR4-201ENST00000343366 SPG7Q9UQ90 795 aa24.86■■□□□ 1.57
CDHR4-201ENST00000343366 ZCRB1Q8TBF4 217 aaKnown RBP24.85■■□□□ 1.57
CDHR4-201ENST00000343366 PKD1L3Q7Z443 1732 aa24.83■■□□□ 1.57
CDHR4-201ENST00000343366 UBR3Q6ZT12 1888 aa24.83■■□□□ 1.57
CDHR4-201ENST00000343366 HMOX1P09601 288 aa24.83■■□□□ 1.57
CDHR4-201ENST00000343366 PLEKHO1Q53GL0 409 aaPredicted RBP24.83■■□□□ 1.57
CDHR4-201ENST00000343366 CD2APQ9Y5K6 639 aa24.83■■□□□ 1.57
CDHR4-201ENST00000343366 C4BP0C0L5 1744 aa24.81■■□□□ 1.56
CDHR4-201ENST00000343366 RSPH6AQ9H0K4 717 aa24.81■■□□□ 1.56
CDHR4-201ENST00000343366 ITGB4P16144 1822 aa24.81■■□□□ 1.56
CDHR4-201ENST00000343366 PCDH11XQ9BZA7 1347 aa24.81■■□□□ 1.56
CDHR4-201ENST00000343366 PCDH11YQ9BZA8 1340 aa24.81■■□□□ 1.56
CDHR4-201ENST00000343366 AEBP1Q8IUX7 1158 aa24.8■■□□□ 1.56
CDHR4-201ENST00000343366 MSL1Q68DK7 614 aa24.79■■□□□ 1.56
CDHR4-201ENST00000343366 PNISRQ8TF01 805 aaKnown RBP24.78■■□□□ 1.56
CDHR4-201ENST00000343366 CICQ96RK0 1608 aaPredicted RBP24.77■■□□□ 1.56
CDHR4-201ENST00000343366 PRKAR2BP31323 418 aa24.77■■□□□ 1.56
CDHR4-201ENST00000343366 HSPA6P17066 643 aa24.76■■□□□ 1.55
CDHR4-201ENST00000343366 AMIGO3Q86WK7 504 aa24.76■■□□□ 1.55
CDHR4-201ENST00000343366 MIER1Q8N108 512 aa24.76■■□□□ 1.55
CDHR4-201ENST00000343366 GAS2L2Q8NHY3 880 aa24.76■■□□□ 1.55
CDHR4-201ENST00000343366 HSP90AB1P08238 724 aaKnown RBP24.75■■□□□ 1.55
CDHR4-201ENST00000343366 CCDC184Q52MB2 194 aa24.75■■□□□ 1.55
CDHR4-201ENST00000343366 IFNL2Q8IZJ0 200 aa24.75■■□□□ 1.55
CDHR4-201ENST00000343366 ADAMTS8Q9UP79 889 aa24.75■■□□□ 1.55
CDHR4-201ENST00000343366 MAPK8IP3Q9UPT6 1336 aa24.75■■□□□ 1.55
CDHR4-201ENST00000343366 GPBP1L1Q9HC44 474 aaPredicted RBP24.74■■□□□ 1.55
CDHR4-201ENST00000343366 KIAA1551Q9HCM1 1747 aa24.73■■□□□ 1.55
CDHR4-201ENST00000343366 PALLDQ8WX93 1383 aa24.73■■□□□ 1.55
CDHR4-201ENST00000343366 MSH5O43196 834 aa24.73■■□□□ 1.55
CDHR4-201ENST00000343366 C1orf141Q5JVX7 400 aa24.73■■□□□ 1.55
CDHR4-201ENST00000343366 FLAD1Q8NFF5 587 aa24.73■■□□□ 1.55
CDHR4-201ENST00000343366 RUNDC1Q96C34 613 aa24.72■■□□□ 1.55
CDHR4-201ENST00000343366 PLEKHF1Q96S99 279 aa24.72■■□□□ 1.55
CDHR4-201ENST00000343366 KIF13BQ9NQT8 1826 aa24.72■■□□□ 1.55
CDHR4-201ENST00000343366 AKAP4Q5JQC9 854 aa24.71■■□□□ 1.55
CDHR4-201ENST00000343366 ZNF530Q6P9A1 599 aaPredicted RBP24.71■■□□□ 1.55
CDHR4-201ENST00000343366 NKX1-1Q15270 411 aaPredicted RBP24.7■■□□□ 1.54
CDHR4-201ENST00000343366 CYP27B1O15528 508 aa24.68■■□□□ 1.54
CDHR4-201ENST00000343366 PHKG2P15735 406 aa24.68■■□□□ 1.54
CDHR4-201ENST00000343366 MTHFSDQ2M296 383 aaKnown RBP24.68■■□□□ 1.54
CDHR4-201ENST00000343366 KIF3CO14782 793 aa24.67■■□□□ 1.54
CDHR4-201ENST00000343366 HTATSF1O43719 755 aaKnown RBP24.67■■□□□ 1.54
CDHR4-201ENST00000343366 DCAF5Q96JK2 942 aa24.67■■□□□ 1.54
CDHR4-201ENST00000343366 HMGB2P26583 209 aaKnown RBP24.66■■□□□ 1.54
CDHR4-201ENST00000343366 PHACTR3Q96KR7 559 aa24.66■■□□□ 1.54
CDHR4-201ENST00000343366 GNAT3A8MTJ3 354 aa24.64■■□□□ 1.54
CDHR4-201ENST00000343366 LMOD3Q0VAK6 560 aa24.64■■□□□ 1.54
CDHR4-201ENST00000343366 FAM9BQ8IZU0 186 aa24.64■■□□□ 1.54
CDHR4-201ENST00000343366 NFE2L2Q16236 605 aa24.63■■□□□ 1.53
CDHR4-201ENST00000343366 NCBP3Q53F19 620 aaKnown RBP24.63■■□□□ 1.53
CDHR4-201ENST00000343366 ZNF526Q8TF50 670 aaPredicted RBP24.63■■□□□ 1.53
CDHR4-201ENST00000343366 MPRIPQ6WCQ1 1025 aa24.62■■□□□ 1.53
CDHR4-201ENST00000343366 SMIM5Q71RC9 77 aa24.62■■□□□ 1.53
CDHR4-201ENST00000343366 NGEFQ8N5V2 710 aa24.62■■□□□ 1.53
CDHR4-201ENST00000343366 RTF1Q92541 710 aaKnown RBP24.62■■□□□ 1.53
CDHR4-201ENST00000343366 ERVV-2B6SEH9 535 aa24.61■■□□□ 1.53
CDHR4-201ENST00000343366 BRCA1P38398 1863 aaKnown RBP24.61■■□□□ 1.53
CDHR4-201ENST00000343366 SCN11AQ9UI33 1791 aa24.6■■□□□ 1.53
CDHR4-201ENST00000343366 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.6■■□□□ 1.53
CDHR4-201ENST00000343366 SSFA2P28290 1259 aa24.6■■□□□ 1.53
CDHR4-201ENST00000343366 CCDC146Q8IYE0 955 aa24.6■■□□□ 1.53
CDHR4-201ENST00000343366 SMARCC1Q92922 1105 aaPredicted RBP24.6■■□□□ 1.53
CDHR4-201ENST00000343366 DLG5Q8TDM6 1919 aa24.59■■□□□ 1.53
CDHR4-201ENST00000343366 VIRMAQ69YN4 1812 aaKnown RBP24.59■■□□□ 1.53
CDHR4-201ENST00000343366 TMPOP42166 694 aaKnown RBP24.59■■□□□ 1.53
CDHR4-201ENST00000343366 PIGBQ92521 554 aa24.59■■□□□ 1.53
CDHR4-201ENST00000343366 AK7Q96M32 723 aa24.59■■□□□ 1.53
CDHR4-201ENST00000343366 ADAMTS7Q9UKP4 1686 aa24.59■■□□□ 1.53
CDHR4-201ENST00000343366 PXDNLA1KZ92 1463 aa24.58■■□□□ 1.53
CDHR4-201ENST00000343366 N4BP2Q86UW6 1770 aaPredicted RBP24.58■■□□□ 1.53
CDHR4-201ENST00000343366 LINC00116Q8NCU8 138 aa24.58■■□□□ 1.53
CDHR4-201ENST00000343366 ZNF831Q5JPB2 1677 aa24.57■■□□□ 1.52
CDHR4-201ENST00000343366 RIPK4P57078 832 aa24.56■■□□□ 1.52
CDHR4-201ENST00000343366 DNAJC5GQ8N7S2 189 aa24.56■■□□□ 1.52
CDHR4-201ENST00000343366 APAF1O14727 1248 aa24.55■■□□□ 1.52
CDHR4-201ENST00000343366 RNMTO43148 476 aaKnown RBP24.55■■□□□ 1.52
CDHR4-201ENST00000343366 PHF14O94880 888 aa24.55■■□□□ 1.52
CDHR4-201ENST00000343366 WWC3Q9ULE0 1092 aa24.55■■□□□ 1.52
CDHR4-201ENST00000343366 LOC102724428A0A0B4J2F2 783 aa24.54■■□□□ 1.52
CDHR4-201ENST00000343366 SIK1P57059 783 aa24.54■■□□□ 1.52
CDHR4-201ENST00000343366 CEMIPQ8WUJ3 1361 aa24.54■■□□□ 1.52
CDHR4-201ENST00000343366 KDM6AO15550 1401 aaPredicted RBP24.53■■□□□ 1.52
CDHR4-201ENST00000343366 CABP4P57796 275 aa24.53■■□□□ 1.52
CDHR4-201ENST00000343366 ITPK1Q13572 414 aa24.53■■□□□ 1.52
CDHR4-201ENST00000343366 TMOD3Q9NYL9 352 aa24.53■■□□□ 1.52
CDHR4-201ENST00000343366 COL5A3P25940 1745 aaPredicted RBP24.52■■□□□ 1.52
CDHR4-201ENST00000343366 PCNTO95613 3336 aa24.52■■□□□ 1.52
CDHR4-201ENST00000343366 CCDC27Q2M243 656 aa24.52■■□□□ 1.52
CDHR4-201ENST00000343366 C10orf71Q711Q0 1435 aa24.52■■□□□ 1.52
CDHR4-201ENST00000343366 MRC1P22897 1456 aa24.51■■□□□ 1.51
CDHR4-201ENST00000343366 CALD1Q05682 793 aaKnown RBP24.51■■□□□ 1.51
CDHR4-201ENST00000343366 TEFQ10587 303 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms