RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 NCKAP5LQ9HCH0 1330 aa8.55□□□□□ -1.04
VCAN-202ENST00000342785 FAM177BA6PVY3 158 aa8.55□□□□□ -1.04
VCAN-202ENST00000342785 ZBTB7BO15156 539 aaPredicted RBP8.55□□□□□ -1.04
VCAN-202ENST00000342785 TPM1P09493 284 aa8.55□□□□□ -1.04
VCAN-202ENST00000342785 RBM10P98175 930 aaKnown RBP8.55□□□□□ -1.04
VCAN-202ENST00000342785 AMOTQ4VCS5 1084 aa8.55□□□□□ -1.04
VCAN-202ENST00000342785 STRN4Q9NRL3 753 aa8.55□□□□□ -1.04
VCAN-202ENST00000342785 HOOK1Q9UJC3 728 aaKnown RBP8.55□□□□□ -1.04
VCAN-202ENST00000342785 ME1P48163 572 aa8.54□□□□□ -1.04
VCAN-202ENST00000342785 TOM1L2Q6ZVM7 507 aa8.54□□□□□ -1.04
VCAN-202ENST00000342785 ZNF396Q96N95 335 aaPredicted RBP8.54□□□□□ -1.04
VCAN-202ENST00000342785 LARP6Q9BRS8 491 aaKnown RBP8.54□□□□□ -1.04
VCAN-202ENST00000342785 PANK2Q9BZ23 570 aa8.54□□□□□ -1.04
VCAN-202ENST00000342785 KDM4AO75164 1064 aa8.54□□□□□ -1.04
VCAN-202ENST00000342785 ABCC10Q5T3U5 1492 aa8.54□□□□□ -1.04
VCAN-202ENST00000342785 RHPN1Q8TCX5 695 aa8.54□□□□□ -1.04
VCAN-202ENST00000342785 NUP62CLQ9H1M0 184 aa8.54□□□□□ -1.04
VCAN-202ENST00000342785 MARCH6O60337 910 aa8.54□□□□□ -1.04
VCAN-202ENST00000342785 TSR1Q2NL82 804 aaKnown RBP8.54□□□□□ -1.04
VCAN-202ENST00000342785 DDX11Q96FC9 970 aa8.54□□□□□ -1.04
VCAN-202ENST00000342785 TMX3Q96JJ7 454 aa8.54□□□□□ -1.04
VCAN-202ENST00000342785 PDIA4P13667 645 aaKnown RBP8.53□□□□□ -1.04
VCAN-202ENST00000342785 FKBP4Q02790 459 aaKnown RBP eCLIP8.53□□□□□ -1.04
VCAN-202ENST00000342785 PTPRTO14522 1441 aa8.53□□□□□ -1.04
VCAN-202ENST00000342785 POGZQ7Z3K3 1410 aa8.53□□□□□ -1.04
VCAN-202ENST00000342785 MTERF4Q7Z6M4 381 aaKnown RBP8.53□□□□□ -1.04
VCAN-202ENST00000342785 BCL11BQ9C0K0 894 aaPredicted RBP8.53□□□□□ -1.04
VCAN-202ENST00000342785 CCDC57Q2TAC2 916 aa8.53□□□□□ -1.04
VCAN-202ENST00000342785 MTHFSDQ2M296 383 aaKnown RBP8.53□□□□□ -1.04
VCAN-202ENST00000342785 PLEKHM2Q8IWE5 1019 aa8.53□□□□□ -1.04
VCAN-202ENST00000342785 SH2B1Q9NRF2 756 aaPredicted RBP8.53□□□□□ -1.04
VCAN-202ENST00000342785 EIF2AK4Q9P2K8 1649 aaKnown RBP8.53□□□□□ -1.04
VCAN-202ENST00000342785 CEP85Q6P2H3 762 aa8.52□□□□□ -1.04
VCAN-202ENST00000342785 CCDC85AQ96PX6 553 aaPredicted RBP8.52□□□□□ -1.04
VCAN-202ENST00000342785 CNNM1Q9NRU3 951 aa8.52□□□□□ -1.04
VCAN-202ENST00000342785 PTCD1O75127 700 aaKnown RBP8.52□□□□□ -1.05
VCAN-202ENST00000342785 TMX4Q9H1E5 349 aaPredicted RBP8.52□□□□□ -1.05
VCAN-202ENST00000342785 ZMYM4Q5VZL5 1548 aa8.52□□□□□ -1.05
VCAN-202ENST00000342785 KDM6BO15054 1643 aa8.52□□□□□ -1.05
VCAN-202ENST00000342785 ATP8B2P98198 1209 aa8.52□□□□□ -1.05
VCAN-202ENST00000342785 SART3Q15020 963 aaKnown RBP8.52□□□□□ -1.05
VCAN-202ENST00000342785 TTC39AQ5SRH9 613 aa8.52□□□□□ -1.05
VCAN-202ENST00000342785 PPIP5K1Q6PFW1 1433 aa8.52□□□□□ -1.05
VCAN-202ENST00000342785 ANKRD20A12PQ8NF67 263 aa8.52□□□□□ -1.05
VCAN-202ENST00000342785 CFAP45Q9UL16 551 aa8.52□□□□□ -1.05
VCAN-202ENST00000342785 ZNF521Q96K83 1311 aa8.52□□□□□ -1.05
VCAN-202ENST00000342785 MAP3K11Q16584 847 aa8.52□□□□□ -1.05
VCAN-202ENST00000342785 SCAND2PQ9GZW5 306 aaPredicted RBP8.52□□□□□ -1.05
VCAN-202ENST00000342785 MYD88Q99836 296 aa8.51□□□□□ -1.05
VCAN-202ENST00000342785 PIK3R4Q99570 1358 aa8.51□□□□□ -1.05
VCAN-202ENST00000342785 RRP12Q5JTH9 1297 aaKnown RBP8.51□□□□□ -1.05
VCAN-202ENST00000342785 TRMT2AQ8IZ69 625 aaKnown RBP8.51□□□□□ -1.05
VCAN-202ENST00000342785 ESYT1Q9BSJ8 1104 aa8.51□□□□□ -1.05
VCAN-202ENST00000342785 MAGI2Q86UL8 1455 aa8.51□□□□□ -1.05
VCAN-202ENST00000342785 SMC2O95347 1197 aa8.51□□□□□ -1.05
VCAN-202ENST00000342785 OLFM4Q6UX06 510 aa8.51□□□□□ -1.05
VCAN-202ENST00000342785 KIF6Q6ZMV9 814 aa8.51□□□□□ -1.05
VCAN-202ENST00000342785 JMYQ8N9B5 988 aa8.51□□□□□ -1.05
VCAN-202ENST00000342785 RBM27Q9P2N5 1060 aaKnown RBP8.51□□□□□ -1.05
VCAN-202ENST00000342785 CTNNA3Q9UI47 895 aa8.51□□□□□ -1.05
VCAN-202ENST00000342785 NPATQ14207 1427 aa8.51□□□□□ -1.05
VCAN-202ENST00000342785 IPO7O95373 1038 aaKnown RBP8.51□□□□□ -1.05
VCAN-202ENST00000342785 NCBP3Q53F19 620 aaKnown RBP8.51□□□□□ -1.05
VCAN-202ENST00000342785 MNS1Q8NEH6 495 aa8.51□□□□□ -1.05
VCAN-202ENST00000342785 HYPKQ9NX55 129 aa8.51□□□□□ -1.05
VCAN-202ENST00000342785 UHRF1BP1LA0JNW5 1464 aa8.51□□□□□ -1.05
VCAN-202ENST00000342785 ABCC2Q92887 1545 aa8.51□□□□□ -1.05
VCAN-202ENST00000342785 TTC21AQ8NDW8 1320 aa8.51□□□□□ -1.05
VCAN-202ENST00000342785 G3V3G9 751 aa8.51□□□□□ -1.05
VCAN-202ENST00000342785 DCAF8Q5TAQ9 597 aa8.51□□□□□ -1.05
VCAN-202ENST00000342785 FILIP1Q7Z7B0 1213 aa8.51□□□□□ -1.05
VCAN-202ENST00000342785 USP25Q9UHP3 1055 aa8.51□□□□□ -1.05
VCAN-202ENST00000342785 EIF4G3O43432 1585 aaKnown RBP8.51□□□□□ -1.05
VCAN-202ENST00000342785 RBM25P49756 843 aaKnown RBP8.5□□□□□ -1.05
VCAN-202ENST00000342785 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.5□□□□□ -1.05
VCAN-202ENST00000342785 MAP3K2Q9Y2U5 619 aa8.5□□□□□ -1.05
VCAN-202ENST00000342785 TNRQ92752 1358 aa8.5□□□□□ -1.05
VCAN-202ENST00000342785 YTHDC2Q9H6S0 1430 aaKnown RBP8.5□□□□□ -1.05
VCAN-202ENST00000342785 RIMS2Q9UQ26 1411 aa8.5□□□□□ -1.05
VCAN-202ENST00000342785 STX6O43752 255 aa8.5□□□□□ -1.05
VCAN-202ENST00000342785 IL13P35225 146 aa8.5□□□□□ -1.05
VCAN-202ENST00000342785 CAMK4Q16566 473 aa8.5□□□□□ -1.05
VCAN-202ENST00000342785 CCDC183Q5T5S1 534 aa8.5□□□□□ -1.05
VCAN-202ENST00000342785 EYA1Q99502 592 aa8.5□□□□□ -1.05
VCAN-202ENST00000342785 A0A087WZG4 1122 aa8.5□□□□□ -1.05
VCAN-202ENST00000342785 RAB3GAP1Q15042 981 aa8.5□□□□□ -1.05
VCAN-202ENST00000342785 OTUD7AQ8TE49 926 aaPredicted RBP8.5□□□□□ -1.05
VCAN-202ENST00000342785 NOL10Q9BSC4 688 aaKnown RBP8.5□□□□□ -1.05
VCAN-202ENST00000342785 AMOTL1Q8IY63 956 aa8.5□□□□□ -1.05
VCAN-202ENST00000342785 CEP57L1Q8IYX8 460 aa8.5□□□□□ -1.05
VCAN-202ENST00000342785 GOLGA6L1Q8N7Z2 621 aa8.5□□□□□ -1.05
VCAN-202ENST00000342785 EVI5LQ96CN4 794 aa8.5□□□□□ -1.05
VCAN-202ENST00000342785 SBNO2Q9Y2G9 1366 aa8.5□□□□□ -1.05
VCAN-202ENST00000342785 MAP3K19Q56UN5 1328 aa8.5□□□□□ -1.05
VCAN-202ENST00000342785 ANAPC15P60006 121 aa8.5□□□□□ -1.05
VCAN-202ENST00000342785 XBP1P17861 261 aa8.49□□□□□ -1.05
VCAN-202ENST00000342785 PDILTQ8N807 584 aa8.49□□□□□ -1.05
VCAN-202ENST00000342785 TFIP11Q9UBB9 837 aaKnown RBP8.49□□□□□ -1.05
VCAN-202ENST00000342785 CHPF2Q9P2E5 772 aa8.49□□□□□ -1.05
VCAN-202ENST00000342785 UQCRHLA0A096LP55 91 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms