RNA–Protein interactions for RNA: ENST00000342016.7

CIR1-201, Transcript of corepressor interacting with RBPJ, 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CIR1, Length 1,921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIR1-201ENST00000342016 NME9Q86XW9 330 aa10.41□□□□□ -0.74
CIR1-201ENST00000342016 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.41□□□□□ -0.747e-8■□□□□ 8.7
CIR1-201ENST00000342016 PXDNLA1KZ92 1463 aa10.41□□□□□ -0.74
CIR1-201ENST00000342016 HDGFL2Q7Z4V5 671 aaPredicted RBP10.41□□□□□ -0.74
CIR1-201ENST00000342016 MEGF6O75095 1541 aa10.4□□□□□ -0.74
CIR1-201ENST00000342016 LCE2DQ5TA82 110 aaPredicted RBP10.4□□□□□ -0.74
CIR1-201ENST00000342016 SMC1BQ8NDV3 1235 aa10.4□□□□□ -0.74
CIR1-201ENST00000342016 TAF1LQ8IZX4 1826 aa10.4□□□□□ -0.74
CIR1-201ENST00000342016 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.39□□□□□ -0.75
CIR1-201ENST00000342016 FAM163AQ96GL9 167 aaPredicted RBP10.39□□□□□ -0.75
CIR1-201ENST00000342016 TOGARAM1Q9Y4F4 1720 aa10.39□□□□□ -0.75
CIR1-201ENST00000342016 KIF13BQ9NQT8 1826 aa10.39□□□□□ -0.75
CIR1-201ENST00000342016 RTL1A6NKG5 1358 aa10.39□□□□□ -0.75
CIR1-201ENST00000342016 ARHGAP27Q6ZUM4 889 aa10.39□□□□□ -0.75
CIR1-201ENST00000342016 LTV1Q96GA3 475 aaPredicted RBP10.39□□□□□ -0.75
CIR1-201ENST00000342016 UTRNP46939 3433 aa10.39□□□□□ -0.75
CIR1-201ENST00000342016 CD163L1Q9NR16 1453 aa10.38□□□□□ -0.75
CIR1-201ENST00000342016 HSPA1AP0DMV8 641 aaKnown RBP10.38□□□□□ -0.75
CIR1-201ENST00000342016 HSPA1BP0DMV9 641 aaKnown RBP10.38□□□□□ -0.75
CIR1-201ENST00000342016 MKRN4PQ13434 485 aaPredicted RBP10.38□□□□□ -0.75
CIR1-201ENST00000342016 BCS1LQ9Y276 419 aa10.38□□□□□ -0.75
CIR1-201ENST00000342016 PCDH11XQ9BZA7 1347 aa10.38□□□□□ -0.75
CIR1-201ENST00000342016 PCDH11YQ9BZA8 1340 aa10.38□□□□□ -0.75
CIR1-201ENST00000342016 UBR3Q6ZT12 1888 aa10.37□□□□□ -0.75
CIR1-201ENST00000342016 ATXN8OSP0DMR3 200 aa10.37□□□□□ -0.75
CIR1-201ENST00000342016 RAPGEF4Q8WZA2 1011 aa10.37□□□□□ -0.75
CIR1-201ENST00000342016 TERF2IPQ9NYB0 399 aa10.37□□□□□ -0.75
CIR1-201ENST00000342016 TNRC6CQ9HCJ0 1690 aaKnown RBP10.37□□□□□ -0.75
CIR1-201ENST00000342016 KIAA1551Q9HCM1 1747 aa10.37□□□□□ -0.75
CIR1-201ENST00000342016 HOXC9P31274 260 aa10.37□□□□□ -0.75
CIR1-201ENST00000342016 HTRA3P83110 453 aa10.37□□□□□ -0.75
CIR1-201ENST00000342016 C9orf131Q5VYM1 1079 aa10.37□□□□□ -0.75
CIR1-201ENST00000342016 ZC3H4Q9UPT8 1303 aaKnown RBP10.36□□□□□ -0.75
CIR1-201ENST00000342016 PHF14O94880 888 aa10.36□□□□□ -0.75
CIR1-201ENST00000342016 TATP17735 454 aaPredicted RBP10.36□□□□□ -0.75
CIR1-201ENST00000342016 SMG6Q86US8 1419 aaKnown RBP10.36□□□□□ -0.75
CIR1-201ENST00000342016 CCDC87Q9NVE4 849 aa10.36□□□□□ -0.75
CIR1-201ENST00000342016 PKD1L3Q7Z443 1732 aa10.35□□□□□ -0.75
CIR1-201ENST00000342016 FCHSD2O94868 740 aa10.35□□□□□ -0.75
CIR1-201ENST00000342016 MMP10P09238 476 aa10.35□□□□□ -0.75
CIR1-201ENST00000342016 AMPHP49418 695 aa10.35□□□□□ -0.75
CIR1-201ENST00000342016 MAP3K19Q56UN5 1328 aa10.35□□□□□ -0.75
CIR1-201ENST00000342016 NLGN1Q8N2Q7 840 aa10.35□□□□□ -0.75
CIR1-201ENST00000342016 PUS7Q96PZ0 661 aaKnown RBP10.35□□□□□ -0.75
CIR1-201ENST00000342016 KCPQ6ZWJ8 1503 aa10.34□□□□□ -0.75
CIR1-201ENST00000342016 ROCK2O75116 1388 aaKnown RBP10.34□□□□□ -0.75
CIR1-201ENST00000342016 MPRIPQ6WCQ1 1025 aa10.33□□□□□ -0.76
CIR1-201ENST00000342016 AMIGO3Q86WK7 504 aa10.33□□□□□ -0.76
CIR1-201ENST00000342016 COG3Q96JB2 828 aa10.33□□□□□ -0.76
CIR1-201ENST00000342016 A0A0G2JLW4 131 aa10.33□□□□□ -0.76
CIR1-201ENST00000342016 TMC1Q8TDI8 760 aa10.33□□□□□ -0.76
CIR1-201ENST00000342016 RRAGCQ9HB90 399 aa10.33□□□□□ -0.76
CIR1-201ENST00000342016 LOC102724428A0A0B4J2F2 783 aa10.32□□□□□ -0.76
CIR1-201ENST00000342016 GNPATO15228 680 aa10.32□□□□□ -0.76
CIR1-201ENST00000342016 DPEP1P16444 411 aa10.32□□□□□ -0.76
CIR1-201ENST00000342016 SIK1P57059 783 aa10.32□□□□□ -0.76
CIR1-201ENST00000342016 LINC00116Q8NCU8 138 aa10.32□□□□□ -0.76
CIR1-201ENST00000342016 DCAF5Q96JK2 942 aa10.32□□□□□ -0.76
CIR1-201ENST00000342016 RNF181Q9P0P0 153 aa10.32□□□□□ -0.76
CIR1-201ENST00000342016 ARFGEF1Q9Y6D6 1849 aa10.32□□□□□ -0.76
CIR1-201ENST00000342016 A0A1W2PP64 1363 aa10.32□□□□□ -0.76
CIR1-201ENST00000342016 C4AP0C0L4 1744 aa10.31□□□□□ -0.76
CIR1-201ENST00000342016 TMF1P82094 1093 aa10.31□□□□□ -0.76
CIR1-201ENST00000342016 NBPF6Q5VWK0 638 aa10.31□□□□□ -0.76
CIR1-201ENST00000342016 NBPF4Q96M43 638 aa10.31□□□□□ -0.76
CIR1-201ENST00000342016 PRDM10Q9NQV6 1147 aa10.31□□□□□ -0.76
CIR1-201ENST00000342016 PIM2Q9P1W9 311 aa10.31□□□□□ -0.76
CIR1-201ENST00000342016 NKX1-1Q15270 411 aaPredicted RBP10.31□□□□□ -0.76
CIR1-201ENST00000342016 DALRD3Q5D0E6 543 aaKnown RBP10.31□□□□□ -0.76
CIR1-201ENST00000342016 PARP3Q9Y6F1 533 aa10.31□□□□□ -0.76
CIR1-201ENST00000342016 N4BP2Q86UW6 1770 aaPredicted RBP10.31□□□□□ -0.76
CIR1-201ENST00000342016 MAP2P11137 1827 aaKnown RBP10.31□□□□□ -0.76
CIR1-201ENST00000342016 BRCA1P38398 1863 aaKnown RBP10.3□□□□□ -0.76
CIR1-201ENST00000342016 KIF24Q5T7B8 1368 aa10.3□□□□□ -0.76
CIR1-201ENST00000342016 PIGBQ92521 554 aa10.3□□□□□ -0.76
CIR1-201ENST00000342016 VEGFAP15692 232 aaPredicted RBP10.29□□□□□ -0.76
CIR1-201ENST00000342016 TRAPPC3LQ5T215 181 aa10.29□□□□□ -0.76
CIR1-201ENST00000342016 SLC12A5Q9H2X9 1139 aa10.29□□□□□ -0.76
CIR1-201ENST00000342016 METRNQ9UJH8 293 aa10.29□□□□□ -0.76
CIR1-201ENST00000342016 RTCBQ9Y3I0 505 aaKnown RBP10.29□□□□□ -0.76
CIR1-201ENST00000342016 RGPD2P0DJD1 1756 aa10.29□□□□□ -0.76
CIR1-201ENST00000342016 INSRP06213 1382 aa10.29□□□□□ -0.76
CIR1-201ENST00000342016 CYP27B1O15528 508 aa10.29□□□□□ -0.76
CIR1-201ENST00000342016 KDM6AO15550 1401 aaPredicted RBP10.28□□□□□ -0.76
CIR1-201ENST00000342016 ITGB4P16144 1822 aa10.28□□□□□ -0.76
CIR1-201ENST00000342016 RC3H1Q5TC82 1133 aaKnown RBP10.28□□□□□ -0.76
CIR1-201ENST00000342016 L3MBTL2Q969R5 705 aa10.28□□□□□ -0.76
CIR1-201ENST00000342016 TMOD3Q9NYL9 352 aa10.28□□□□□ -0.76
CIR1-201ENST00000342016 ZNF831Q5JPB2 1677 aa10.27□□□□□ -0.76
CIR1-201ENST00000342016 POTEJP0CG39 1038 aa10.27□□□□□ -0.76
CIR1-201ENST00000342016 C7P10643 843 aa10.27□□□□□ -0.76
CIR1-201ENST00000342016 KCNA3P22001 575 aa10.27□□□□□ -0.76
CIR1-201ENST00000342016 ATP6V1AP38606 617 aa10.27□□□□□ -0.76
CIR1-201ENST00000342016 ITPK1Q13572 414 aa10.27□□□□□ -0.76
CIR1-201ENST00000342016 SMIM5Q71RC9 77 aa10.27□□□□□ -0.76
CIR1-201ENST00000342016 CDAN1Q8IWY9 1227 aa10.27□□□□□ -0.76
CIR1-201ENST00000342016 USHBP1Q8N6Y0 703 aa10.27□□□□□ -0.76
CIR1-201ENST00000342016 SLC39A7Q92504 469 aa10.27□□□□□ -0.76
CIR1-201ENST00000342016 SCUBE2Q9NQ36 999 aa10.27□□□□□ -0.76
CIR1-201ENST00000342016 SPG7Q9UQ90 795 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms