RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 CAVIN1Q6NZI2 390 aaKnown RBP9.09□□□□□ -0.95
ATP2B4-201ENST00000341360 SMARCC1Q92922 1105 aaPredicted RBP9.09□□□□□ -0.95
ATP2B4-201ENST00000341360 EHMT1Q9H9B1 1298 aa9.09□□□□□ -0.95
ATP2B4-201ENST00000341360 LRP2BPQ9P2M1 347 aa9.09□□□□□ -0.95
ATP2B4-201ENST00000341360 TRAK2O60296 914 aa9.09□□□□□ -0.95
ATP2B4-201ENST00000341360 RRP12Q5JTH9 1297 aaKnown RBP9.09□□□□□ -0.95
ATP2B4-201ENST00000341360 HOMEZQ8IX15 550 aa9.09□□□□□ -0.95
ATP2B4-201ENST00000341360 MAP3K12Q12852 859 aa9.09□□□□□ -0.95
ATP2B4-201ENST00000341360 IDI1Q13907 227 aa9.09□□□□□ -0.95
ATP2B4-201ENST00000341360 CDC5LQ99459 802 aaKnown RBP9.09□□□□□ -0.95
ATP2B4-201ENST00000341360 RAI14Q9P0K7 980 aa9.09□□□□□ -0.95
ATP2B4-201ENST00000341360 SOS1Q07889 1333 aaPredicted RBP9.09□□□□□ -0.95
ATP2B4-201ENST00000341360 FAM177BA6PVY3 158 aa9.08□□□□□ -0.96
ATP2B4-201ENST00000341360 SLC5A1P13866 664 aa9.08□□□□□ -0.96
ATP2B4-201ENST00000341360 NAP1L1P55209 391 aaKnown RBP9.08□□□□□ -0.96
ATP2B4-201ENST00000341360 AIDAQ96BJ3 306 aa9.08□□□□□ -0.96
ATP2B4-201ENST00000341360 DCTN1Q14203 1278 aa9.08□□□□□ -0.96
ATP2B4-201ENST00000341360 METTL24Q5JXM2 366 aa9.08□□□□□ -0.96
ATP2B4-201ENST00000341360 MAP7D2Q96T17 732 aa9.08□□□□□ -0.96
ATP2B4-201ENST00000341360 ABCC10Q5T3U5 1492 aa9.08□□□□□ -0.96
ATP2B4-201ENST00000341360 RRP9O43818 475 aaKnown RBP9.08□□□□□ -0.96
ATP2B4-201ENST00000341360 KIF20AO95235 890 aa9.08□□□□□ -0.96
ATP2B4-201ENST00000341360 CCDC192P0DO97 292 aa9.08□□□□□ -0.96
ATP2B4-201ENST00000341360 ZC3H6P61129 1189 aaKnown RBP9.08□□□□□ -0.96
ATP2B4-201ENST00000341360 TTF1Q15361 905 aaPredicted RBP9.08□□□□□ -0.96
ATP2B4-201ENST00000341360 RAB34Q9BZG1 259 aa9.08□□□□□ -0.96
ATP2B4-201ENST00000341360 ADGBQ8N7X0 1667 aa9.08□□□□□ -0.96
ATP2B4-201ENST00000341360 IFIT5Q13325 482 aaKnown RBP9.08□□□□□ -0.96
ATP2B4-201ENST00000341360 BLMP54132 1417 aaPredicted RBP9.08□□□□□ -0.96
ATP2B4-201ENST00000341360 ERLIN2O94905 339 aa9.07□□□□□ -0.96
ATP2B4-201ENST00000341360 MCM4P33991 863 aa9.07□□□□□ -0.96
ATP2B4-201ENST00000341360 SPTY2D1Q68D10 685 aaPredicted RBP9.07□□□□□ -0.96
ATP2B4-201ENST00000341360 PRAG1Q86YV5 1406 aa9.07□□□□□ -0.96
ATP2B4-201ENST00000341360 MYL6BP14649 208 aa9.07□□□□□ -0.96
ATP2B4-201ENST00000341360 PDE4CQ08493 712 aa9.07□□□□□ -0.96
ATP2B4-201ENST00000341360 CCDC178Q5BJE1 867 aa9.07□□□□□ -0.96
ATP2B4-201ENST00000341360 TSR2Q969E8 191 aaKnown RBP9.07□□□□□ -0.96
ATP2B4-201ENST00000341360 PYM1Q9BRP8 204 aaKnown RBP9.07□□□□□ -0.96
ATP2B4-201ENST00000341360 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.07□□□□□ -0.969e-11■■■■■ 168
ATP2B4-201ENST00000341360 SH2B1Q9NRF2 756 aaPredicted RBP9.07□□□□□ -0.96
ATP2B4-201ENST00000341360 A2MP01023 1474 aa9.07□□□□□ -0.96
ATP2B4-201ENST00000341360 PPP1R12BO60237 982 aaPredicted RBP9.07□□□□□ -0.96
ATP2B4-201ENST00000341360 RBM5P52756 815 aaKnown RBP eCLIP9.07□□□□□ -0.96
ATP2B4-201ENST00000341360 HMGN5P82970 282 aaKnown RBP9.07□□□□□ -0.96
ATP2B4-201ENST00000341360 FOXD4L6Q3SYB3 417 aaPredicted RBP9.07□□□□□ -0.96
ATP2B4-201ENST00000341360 FOXD4L3Q6VB84 417 aaPredicted RBP9.07□□□□□ -0.96
ATP2B4-201ENST00000341360 K7ELQ4 463 aaPredicted RBP9.07□□□□□ -0.96
ATP2B4-201ENST00000341360 RRS1Q15050 365 aaKnown RBP9.07□□□□□ -0.96
ATP2B4-201ENST00000341360 SAMD1Q6SPF0 538 aaPredicted RBP9.07□□□□□ -0.96
ATP2B4-201ENST00000341360 KRT28Q7Z3Y7 464 aa9.07□□□□□ -0.96
ATP2B4-201ENST00000341360 PPP1R42Q7Z4L9 355 aa9.07□□□□□ -0.96
ATP2B4-201ENST00000341360 KDM5CP41229 1560 aa9.07□□□□□ -0.96
ATP2B4-201ENST00000341360 NUP153P49790 1475 aaKnown RBP9.06□□□□□ -0.96
ATP2B4-201ENST00000341360 ANKRD18BA2A2Z9 1011 aa9.06□□□□□ -0.96
ATP2B4-201ENST00000341360 C8orf34Q49A92 452 aa9.06□□□□□ -0.96
ATP2B4-201ENST00000341360 ZSCAN29Q8IWY8 852 aaPredicted RBP9.06□□□□□ -0.96
ATP2B4-201ENST00000341360 HSP90AB2PQ58FF8 381 aa9.06□□□□□ -0.96
ATP2B4-201ENST00000341360 DNAAF4Q8WXU2 420 aa9.06□□□□□ -0.96
ATP2B4-201ENST00000341360 NGLY1Q96IV0 654 aa9.06□□□□□ -0.96
ATP2B4-201ENST00000341360 POLR1AO95602 1720 aaPredicted RBP9.06□□□□□ -0.96
ATP2B4-201ENST00000341360 MPHOSPH10O00566 681 aaKnown RBP9.06□□□□□ -0.96
ATP2B4-201ENST00000341360 IQCA1Q86XH1 822 aa9.06□□□□□ -0.96
ATP2B4-201ENST00000341360 CCDC12Q8WUD4 166 aaPredicted RBP9.06□□□□□ -0.96
ATP2B4-201ENST00000341360 TSPY26PQ9H489 355 aa9.06□□□□□ -0.96
ATP2B4-201ENST00000341360 KDM2BQ8NHM5 1336 aa9.06□□□□□ -0.96
ATP2B4-201ENST00000341360 PIK3R4Q99570 1358 aa9.06□□□□□ -0.96
ATP2B4-201ENST00000341360 BCAR3O75815 825 aa9.05□□□□□ -0.96
ATP2B4-201ENST00000341360 FKBP4Q02790 459 aaKnown RBP eCLIP9.05□□□□□ -0.96
ATP2B4-201ENST00000341360 C20orf194Q5TEA3 1177 aa9.05□□□□□ -0.96
ATP2B4-201ENST00000341360 ANKRD18AQ8IVF6 992 aa9.05□□□□□ -0.96
ATP2B4-201ENST00000341360 WDR7Q9Y4E6 1490 aa9.05□□□□□ -0.96
ATP2B4-201ENST00000341360 RPGRQ92834 1020 aaKnown RBP9.05□□□□□ -0.96
ATP2B4-201ENST00000341360 SEC63Q9UGP8 760 aaKnown RBP9.05□□□□□ -0.96
ATP2B4-201ENST00000341360 SMTNL1A8MU46 457 aa9.05□□□□□ -0.96
ATP2B4-201ENST00000341360 POTEJP0CG39 1038 aa9.05□□□□□ -0.96
ATP2B4-201ENST00000341360 ATP2B2Q01814 1243 aa9.05□□□□□ -0.96
ATP2B4-201ENST00000341360 ZFYVE27Q5T4F4 411 aa9.05□□□□□ -0.96
ATP2B4-201ENST00000341360 LARP1BQ659C4 914 aaKnown RBP9.05□□□□□ -0.96
ATP2B4-201ENST00000341360 TRIM5Q9C035 493 aa9.05□□□□□ -0.96
ATP2B4-201ENST00000341360 PDRG1Q9NUG6 133 aa9.05□□□□□ -0.96
ATP2B4-201ENST00000341360 PIK3C2GO75747 1445 aa9.05□□□□□ -0.96
ATP2B4-201ENST00000341360 NOS1P29475 1434 aa9.05□□□□□ -0.96
ATP2B4-201ENST00000341360 COL17A1Q9UMD9 1497 aaPredicted RBP9.05□□□□□ -0.96
ATP2B4-201ENST00000341360 MAGI3Q5TCQ9 1506 aa9.05□□□□□ -0.96
ATP2B4-201ENST00000341360 ADAMTS12P58397 1594 aa9.05□□□□□ -0.96
ATP2B4-201ENST00000341360 KIAA0556O60303 1618 aa9.05□□□□□ -0.96
ATP2B4-201ENST00000341360 IQCEQ6IPM2 695 aa9.05□□□□□ -0.96
ATP2B4-201ENST00000341360 PPFIBP1Q86W92 1011 aa9.05□□□□□ -0.96
ATP2B4-201ENST00000341360 ZMYM3Q14202 1370 aa9.05□□□□□ -0.96
ATP2B4-201ENST00000341360 PER1O15534 1290 aaPredicted RBP9.04□□□□□ -0.96
ATP2B4-201ENST00000341360 FGFR1OPO95684 399 aaKnown RBP9.04□□□□□ -0.96
ATP2B4-201ENST00000341360 UQCRFS1P1P0C7P4 283 aa9.04□□□□□ -0.96
ATP2B4-201ENST00000341360 NASPP49321 788 aaPredicted RBP9.04□□□□□ -0.96
ATP2B4-201ENST00000341360 PPP4R3AQ6IN85 833 aa9.04□□□□□ -0.96
ATP2B4-201ENST00000341360 CEP57L1Q8IYX8 460 aa9.04□□□□□ -0.96
ATP2B4-201ENST00000341360 CTCFLQ8NI51 663 aaPredicted RBP9.04□□□□□ -0.96
ATP2B4-201ENST00000341360 ARHGAP45Q92619 1136 aa9.04□□□□□ -0.96
ATP2B4-201ENST00000341360 PDCL3Q9H2J4 239 aa9.04□□□□□ -0.96
ATP2B4-201ENST00000341360 CETN2P41208 172 aa9.04□□□□□ -0.96
ATP2B4-201ENST00000341360 ZGPATQ8N5A5 531 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms