RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 TERF1P54274 439 aa11.38□□□□□ -0.59
TRERF1-201ENST00000340840 UPF3BQ9BZI7 483 aaKnown RBP11.38□□□□□ -0.59
TRERF1-201ENST00000340840 DIAPH3Q9NSV4 1193 aa11.38□□□□□ -0.59
TRERF1-201ENST00000340840 ZRANB1Q9UGI0 708 aa11.38□□□□□ -0.59
TRERF1-201ENST00000340840 YEATS2Q9ULM3 1422 aa11.38□□□□□ -0.59
TRERF1-201ENST00000340840 NEO1Q92859 1461 aa11.37□□□□□ -0.59
TRERF1-201ENST00000340840 ANAPC15P60006 121 aa11.37□□□□□ -0.59
TRERF1-201ENST00000340840 HDAC5Q9UQL6 1122 aa11.37□□□□□ -0.59
TRERF1-201ENST00000340840 HMGN5P82970 282 aaKnown RBP11.37□□□□□ -0.59
TRERF1-201ENST00000340840 TNRQ92752 1358 aa11.37□□□□□ -0.59
TRERF1-201ENST00000340840 SURF6O75683 361 aaKnown RBP11.37□□□□□ -0.59
TRERF1-201ENST00000340840 KRT24Q2M2I5 525 aa11.37□□□□□ -0.59
TRERF1-201ENST00000340840 ESYT1Q9BSJ8 1104 aa11.37□□□□□ -0.59
TRERF1-201ENST00000340840 MROH2AA6NES4 1674 aa11.37□□□□□ -0.59
TRERF1-201ENST00000340840 CSB-PGBD3P0DP91 1061 aa11.36□□□□□ -0.59
TRERF1-201ENST00000340840 HSP90AB4PQ58FF6 505 aa11.36□□□□□ -0.59
TRERF1-201ENST00000340840 SASS6Q6UVJ0 657 aa11.36□□□□□ -0.59
TRERF1-201ENST00000340840 MIS18AQ9NYP9 233 aa11.36□□□□□ -0.59
TRERF1-201ENST00000340840 MSH6P52701 1360 aa11.36□□□□□ -0.59
TRERF1-201ENST00000340840 AEBP1Q8IUX7 1158 aa11.36□□□□□ -0.59
TRERF1-201ENST00000340840 ZMYND15Q9H091 742 aa11.36□□□□□ -0.59
TRERF1-201ENST00000340840 DRC7Q8IY82 874 aa11.36□□□□□ -0.59
TRERF1-201ENST00000340840 CNTROBQ8N137 903 aa11.36□□□□□ -0.59
TRERF1-201ENST00000340840 CHL1O00533 1208 aa11.35□□□□□ -0.59
TRERF1-201ENST00000340840 CFAP74Q9C0B2 1584 aa11.35□□□□□ -0.59
TRERF1-201ENST00000340840 EIF4A2Q14240 407 aaKnown RBP11.35□□□□□ -0.59
TRERF1-201ENST00000340840 INTS4Q96HW7 963 aaKnown RBP11.35□□□□□ -0.59
TRERF1-201ENST00000340840 LRRC7Q96NW7 1537 aa11.35□□□□□ -0.59
TRERF1-201ENST00000340840 PKP1Q13835 747 aa11.35□□□□□ -0.59
TRERF1-201ENST00000340840 MROH1Q8NDA8 1641 aa11.35□□□□□ -0.59
TRERF1-201ENST00000340840 RTL1A6NKG5 1358 aa11.34□□□□□ -0.59
TRERF1-201ENST00000340840 ATP7BP35670 1465 aa11.34□□□□□ -0.59
TRERF1-201ENST00000340840 ZKSCAN1P17029 563 aaPredicted RBP11.34□□□□□ -0.59
TRERF1-201ENST00000340840 PSME1Q06323 249 aa11.34□□□□□ -0.59
TRERF1-201ENST00000340840 TTC21BQ7Z4L5 1316 aa11.34□□□□□ -0.59
TRERF1-201ENST00000340840 HECW2Q9P2P5 1572 aa11.34□□□□□ -0.59
TRERF1-201ENST00000340840 DYNC1I1O14576 645 aa11.34□□□□□ -0.59
TRERF1-201ENST00000340840 FIBPO43427 364 aa11.34□□□□□ -0.59
TRERF1-201ENST00000340840 TSHZ3Q63HK5 1081 aa11.34□□□□□ -0.59
TRERF1-201ENST00000340840 IL1RAPL2Q9NP60 686 aa11.34□□□□□ -0.59
TRERF1-201ENST00000340840 ARHGAP31Q2M1Z3 1444 aa11.34□□□□□ -0.59
TRERF1-201ENST00000340840 CCDC183Q5T5S1 534 aa11.34□□□□□ -0.59
TRERF1-201ENST00000340840 KIAA0232Q92628 1395 aa11.34□□□□□ -0.59
TRERF1-201ENST00000340840 REREQ9P2R6 1566 aa11.34□□□□□ -0.59
TRERF1-201ENST00000340840 TPM3P06753 285 aa11.33□□□□□ -0.6
TRERF1-201ENST00000340840 ESCO1Q5FWF5 840 aa11.33□□□□□ -0.6
TRERF1-201ENST00000340840 LTV1Q96GA3 475 aaPredicted RBP11.33□□□□□ -0.6
TRERF1-201ENST00000340840 TMEM63CQ9P1W3 806 aa11.33□□□□□ -0.6
TRERF1-201ENST00000340840 AATKQ6ZMQ8 1374 aa11.33□□□□□ -0.6
TRERF1-201ENST00000340840 COL3A1P02461 1466 aaPredicted RBP11.33□□□□□ -0.6
TRERF1-201ENST00000340840 KIDINS220Q9ULH0 1771 aa11.33□□□□□ -0.6
TRERF1-201ENST00000340840 VPS37CA5D8V6 355 aaPredicted RBP11.33□□□□□ -0.6
TRERF1-201ENST00000340840 HTATSF1O43719 755 aaKnown RBP11.33□□□□□ -0.6
TRERF1-201ENST00000340840 FLIIQ13045 1269 aa11.33□□□□□ -0.6
TRERF1-201ENST00000340840 ZNF500O60304 480 aaPredicted RBP11.33□□□□□ -0.6
TRERF1-201ENST00000340840 UVSSAQ2YD98 709 aa11.33□□□□□ -0.6
TRERF1-201ENST00000340840 GDPD2Q9HCC8 539 aa11.33□□□□□ -0.6
TRERF1-201ENST00000340840 PPLO60437 1756 aa11.33□□□□□ -0.6
TRERF1-201ENST00000340840 LMTK3Q96Q04 1460 aa11.32□□□□□ -0.6
TRERF1-201ENST00000340840 ZC3H13Q5T200 1668 aaKnown RBP11.32□□□□□ -0.6
TRERF1-201ENST00000340840 EIF2S2P20042 333 aaKnown RBP11.32□□□□□ -0.6
TRERF1-201ENST00000340840 FGD1P98174 961 aa11.32□□□□□ -0.6
TRERF1-201ENST00000340840 HDGFL1Q5TGJ6 251 aa11.32□□□□□ -0.6
TRERF1-201ENST00000340840 GPT2Q8TD30 523 aa11.32□□□□□ -0.6
TRERF1-201ENST00000340840 RAB11FIP3O75154 756 aa11.31□□□□□ -0.6
TRERF1-201ENST00000340840 BRD1O95696 1058 aa11.31□□□□□ -0.6
TRERF1-201ENST00000340840 HSP90AB2PQ58FF8 381 aa11.31□□□□□ -0.6
TRERF1-201ENST00000340840 MPNDQ8N594 471 aa11.31□□□□□ -0.6
TRERF1-201ENST00000340840 LRRFIP2Q9Y608 721 aaKnown RBP11.31□□□□□ -0.6
TRERF1-201ENST00000340840 CDK12Q9NYV4 1490 aaPredicted RBP11.31□□□□□ -0.6
TRERF1-201ENST00000340840 CHMLP26374 656 aa11.31□□□□□ -0.6
TRERF1-201ENST00000340840 CLASRPQ8N2M8 674 aaKnown RBP11.31□□□□□ -0.6
TRERF1-201ENST00000340840 NEXMIFQ5QGS0 1516 aa11.31□□□□□ -0.6
TRERF1-201ENST00000340840 ATP8B2P98198 1209 aa11.31□□□□□ -0.6
TRERF1-201ENST00000340840 IFIT2P09913 472 aaKnown RBP11.31□□□□□ -0.6
TRERF1-201ENST00000340840 NUTM1Q86Y26 1132 aa11.31□□□□□ -0.6
TRERF1-201ENST00000340840 OSBPL3Q9H4L5 887 aa11.31□□□□□ -0.6
TRERF1-201ENST00000340840 USP25Q9UHP3 1055 aa11.31□□□□□ -0.6
TRERF1-201ENST00000340840 CYP2E1P05181 493 aaPredicted RBP11.3□□□□□ -0.6
TRERF1-201ENST00000340840 KIF1BPQ96EK5 621 aa11.3□□□□□ -0.6
TRERF1-201ENST00000340840 CPSF1Q10570 1443 aaKnown RBP11.3□□□□□ -0.6
TRERF1-201ENST00000340840 LIMCH1Q9UPQ0 1083 aa11.3□□□□□ -0.6
TRERF1-201ENST00000340840 IFT172Q9UG01 1749 aa11.3□□□□□ -0.6
TRERF1-201ENST00000340840 SRGAP3O43295 1099 aa11.3□□□□□ -0.6
TRERF1-201ENST00000340840 MAP4K4O95819 1239 aaPredicted RBP11.3□□□□□ -0.6
TRERF1-201ENST00000340840 ZRSR1Q15695 479 aaKnown RBP11.3□□□□□ -0.6
TRERF1-201ENST00000340840 USP48Q86UV5 1035 aa11.3□□□□□ -0.6
TRERF1-201ENST00000340840 EVA1CP58658 441 aa11.29□□□□□ -0.6
TRERF1-201ENST00000340840 C9orf78Q9NZ63 289 aaPredicted RBP11.29□□□□□ -0.6
TRERF1-201ENST00000340840 PTPRMP28827 1452 aa11.29□□□□□ -0.6
TRERF1-201ENST00000340840 GNAT3A8MTJ3 354 aa11.29□□□□□ -0.6
TRERF1-201ENST00000340840 CCDC192P0DO97 292 aa11.29□□□□□ -0.6
TRERF1-201ENST00000340840 PDCP20941 246 aa11.29□□□□□ -0.6
TRERF1-201ENST00000340840 NLRP6P59044 892 aa11.29□□□□□ -0.6
TRERF1-201ENST00000340840 G2E3Q7L622 706 aa11.29□□□□□ -0.6
TRERF1-201ENST00000340840 ZSCAN31Q96LW9 406 aaPredicted RBP11.29□□□□□ -0.6
TRERF1-201ENST00000340840 CYP46A1Q9Y6A2 500 aa11.29□□□□□ -0.6
TRERF1-201ENST00000340840 UBE2HP62256 183 aa11.29□□□□□ -0.6
TRERF1-201ENST00000340840 TEFQ10587 303 aa11.29□□□□□ -0.6
TRERF1-201ENST00000340840 RNF20Q5VTR2 975 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms