RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 DDX11Q96FC9 970 aa22.92■■□□□ 1.26
CDK13-202ENST00000340829 NACAP1Q9BZK3 213 aa22.92■■□□□ 1.26
CDK13-202ENST00000340829 POLKQ9UBT6 870 aa22.92■■□□□ 1.26
CDK13-202ENST00000340829 SYCE3A1L190 88 aa22.91■■□□□ 1.26
CDK13-202ENST00000340829 TNPO1Q92973 898 aaKnown RBP22.91■■□□□ 1.26
CDK13-202ENST00000340829 TNRQ92752 1358 aa22.91■■□□□ 1.26
CDK13-202ENST00000340829 EIF4G3O43432 1585 aaKnown RBP22.91■■□□□ 1.26
CDK13-202ENST00000340829 PPIP5K1Q6PFW1 1433 aa22.91■■□□□ 1.26
CDK13-202ENST00000340829 RLBP1P12271 317 aa22.91■■□□□ 1.26
CDK13-202ENST00000340829 ZSCAN25Q6NSZ9 544 aa22.91■■□□□ 1.26
CDK13-202ENST00000340829 C8orf58Q8NAV2 365 aa22.91■■□□□ 1.26
CDK13-202ENST00000340829 TCEAL9Q9UHQ7 104 aa22.91■■□□□ 1.26
CDK13-202ENST00000340829 NUCB1Q02818 461 aa22.9■■□□□ 1.26
CDK13-202ENST00000340829 MNS1Q8NEH6 495 aa22.9■■□□□ 1.26
CDK13-202ENST00000340829 ANXA1P04083 346 aa22.9■■□□□ 1.26
CDK13-202ENST00000340829 ARHGAP45Q92619 1136 aa22.9■■□□□ 1.26
CDK13-202ENST00000340829 ANO8Q9HCE9 1232 aaPredicted RBP22.9■■□□□ 1.26
CDK13-202ENST00000340829 MEIS3Q99687 375 aa22.9■■□□□ 1.26
CDK13-202ENST00000340829 CTNNA3Q9UI47 895 aa22.9■■□□□ 1.26
CDK13-202ENST00000340829 IDH1O75874 414 aaKnown RBP22.89■■□□□ 1.26
CDK13-202ENST00000340829 CTDP1Q9Y5B0 961 aaPredicted RBP22.89■■□□□ 1.26
CDK13-202ENST00000340829 PIK3C2GO75747 1445 aa22.89■■□□□ 1.25
CDK13-202ENST00000340829 PI4KAP2A4QPH2 592 aa22.89■■□□□ 1.25
CDK13-202ENST00000340829 CCDC70Q6NSX1 233 aa22.89■■□□□ 1.25
CDK13-202ENST00000340829 PI4KAP1Q8N8J0 262 aa22.89■■□□□ 1.25
CDK13-202ENST00000340829 JMYQ8N9B5 988 aa22.89■■□□□ 1.25
CDK13-202ENST00000340829 TEX14Q8IWB6 1497 aa22.89■■□□□ 1.25
CDK13-202ENST00000340829 TRIM22Q8IYM9 498 aa22.88■■□□□ 1.25
CDK13-202ENST00000340829 NUP133Q8WUM0 1156 aa22.88■■□□□ 1.25
CDK13-202ENST00000340829 CCDC69A6NI79 296 aa22.88■■□□□ 1.25
CDK13-202ENST00000340829 SLC3A2P08195 630 aaKnown RBP22.88■■□□□ 1.25
CDK13-202ENST00000340829 TTC22Q5TAA0 569 aa22.88■■□□□ 1.25
CDK13-202ENST00000340829 COL17A1Q9UMD9 1497 aaPredicted RBP22.88■■□□□ 1.25
CDK13-202ENST00000340829 HYPKQ9NX55 129 aa22.88■■□□□ 1.25
CDK13-202ENST00000340829 MAP3K2Q9Y2U5 619 aa22.88■■□□□ 1.25
CDK13-202ENST00000340829 LARP6Q9BRS8 491 aaKnown RBP22.87■■□□□ 1.25
CDK13-202ENST00000340829 PPP1R42Q7Z4L9 355 aa22.87■■□□□ 1.25
CDK13-202ENST00000340829 GPS2Q13227 327 aa22.87■■□□□ 1.25
CDK13-202ENST00000340829 STARD3NLO95772 234 aa22.87■■□□□ 1.25
CDK13-202ENST00000340829 NUP62CLQ9H1M0 184 aa22.87■■□□□ 1.25
CDK13-202ENST00000340829 C8orf34Q49A92 452 aa22.86■■□□□ 1.25
CDK13-202ENST00000340829 MRPL50Q8N5N7 158 aaKnown RBP22.86■■□□□ 1.25
CDK13-202ENST00000340829 UHRF1BP1Q6BDS2 1440 aa22.86■■□□□ 1.25
CDK13-202ENST00000340829 TNNT3P45378 269 aaPredicted RBP22.86■■□□□ 1.25
CDK13-202ENST00000340829 METTL24Q5JXM2 366 aa22.86■■□□□ 1.25
CDK13-202ENST00000340829 ESPNB1AK53 854 aa22.86■■□□□ 1.25
CDK13-202ENST00000340829 EIF4A2Q14240 407 aaKnown RBP22.86■■□□□ 1.25
CDK13-202ENST00000340829 CFAP45Q9UL16 551 aa22.85■■□□□ 1.25
CDK13-202ENST00000340829 RIMS2Q9UQ26 1411 aa22.85■■□□□ 1.25
CDK13-202ENST00000340829 TDO2P48775 406 aa22.85■■□□□ 1.25
CDK13-202ENST00000340829 TMOD3Q9NYL9 352 aa22.85■■□□□ 1.25
CDK13-202ENST00000340829 UHRF1BP1LA0JNW5 1464 aa22.85■■□□□ 1.25
CDK13-202ENST00000340829 KRT28Q7Z3Y7 464 aa22.85■■□□□ 1.25
CDK13-202ENST00000340829 ABCC10Q5T3U5 1492 aa22.84■■□□□ 1.25
CDK13-202ENST00000340829 A0A087WZG4 1122 aa22.84■■□□□ 1.25
CDK13-202ENST00000340829 ZNF771Q7L3S4 317 aaPredicted RBP22.84■■□□□ 1.25
CDK13-202ENST00000340829 TSPYL6Q8N831 410 aa22.84■■□□□ 1.25
CDK13-202ENST00000340829 PIK3R4Q99570 1358 aa22.84■■□□□ 1.25
CDK13-202ENST00000340829 ADGRL2O95490 1459 aa22.84■■□□□ 1.25
CDK13-202ENST00000340829 A0A1W2PP64 1363 aa22.84■■□□□ 1.25
CDK13-202ENST00000340829 IFIT1P09914 478 aaKnown RBP22.83■■□□□ 1.25
CDK13-202ENST00000340829 IMMTQ16891 758 aaKnown RBP22.83■■□□□ 1.25
CDK13-202ENST00000340829 PHACTR3Q96KR7 559 aa22.83■■□□□ 1.25
CDK13-202ENST00000340829 ECHDC1Q9NTX5 307 aa22.83■■□□□ 1.24
CDK13-202ENST00000340829 BRPF1P55201 1214 aaPredicted RBP22.82■■□□□ 1.24
CDK13-202ENST00000340829 TTLL5Q6EMB2 1281 aa22.82■■□□□ 1.24
CDK13-202ENST00000340829 IKQ13123 557 aaPredicted RBP22.82■■□□□ 1.24
CDK13-202ENST00000340829 BICDL1Q6ZP65 573 aa22.82■■□□□ 1.24
CDK13-202ENST00000340829 RAI14Q9P0K7 980 aa22.82■■□□□ 1.24
CDK13-202ENST00000340829 LRP2BPQ9P2M1 347 aa22.82■■□□□ 1.24
CDK13-202ENST00000340829 ANKRD24Q8TF21 1146 aa22.82■■□□□ 1.24
CDK13-202ENST00000340829 PUS7Q96PZ0 661 aaKnown RBP22.82■■□□□ 1.24
CDK13-202ENST00000340829 SDSP20132 328 aa22.81■■□□□ 1.24
CDK13-202ENST00000340829 CAMK4Q16566 473 aa22.81■■□□□ 1.24
CDK13-202ENST00000340829 AIDAQ96BJ3 306 aa22.81■■□□□ 1.24
CDK13-202ENST00000340829 SERPINC1P01008 464 aa22.81■■□□□ 1.24
CDK13-202ENST00000340829 LIMCH1Q9UPQ0 1083 aa22.81■■□□□ 1.24
CDK13-202ENST00000340829 U3KPZ7 1027 aaPredicted RBP22.81■■□□□ 1.24
CDK13-202ENST00000340829 NAP1L1P55209 391 aaKnown RBP22.81■■□□□ 1.24
CDK13-202ENST00000340829 MAGI3Q5TCQ9 1506 aa22.81■■□□□ 1.24
CDK13-202ENST00000340829 ABCA5Q8WWZ7 1642 aa22.8■■□□□ 1.24
CDK13-202ENST00000340829 SAMD9Q5K651 1589 aa22.8■■□□□ 1.24
CDK13-202ENST00000340829 ZBTB3Q9H5J0 574 aa22.8■■□□□ 1.24
CDK13-202ENST00000340829 TTC21AQ8NDW8 1320 aa22.8■■□□□ 1.24
CDK13-202ENST00000340829 CDKL5O76039 1030 aa22.8■■□□□ 1.24
CDK13-202ENST00000340829 TXLNAP40222 546 aa22.8■■□□□ 1.24
CDK13-202ENST00000340829 KRT24Q2M2I5 525 aa22.8■■□□□ 1.24
CDK13-202ENST00000340829 AKAP2Q9Y2D5 859 aa22.8■■□□□ 1.24
CDK13-202ENST00000340829 NCKAP5LQ9HCH0 1330 aa22.8■■□□□ 1.24
CDK13-202ENST00000340829 ATP5J2-PTCD1G3V325 749 aa22.8■■□□□ 1.24
CDK13-202ENST00000340829 VAMP4O75379 141 aa22.79■■□□□ 1.24
CDK13-202ENST00000340829 ANKRD44Q8N8A2 993 aa22.79■■□□□ 1.24
CDK13-202ENST00000340829 CCDC43Q96MW1 224 aaKnown RBP22.79■■□□□ 1.24
CDK13-202ENST00000340829 UBAC1Q9BSL1 405 aa22.79■■□□□ 1.24
CDK13-202ENST00000340829 ARGLU1Q9NWB6 273 aaPredicted RBP22.79■■□□□ 1.24
CDK13-202ENST00000340829 ABCF2Q9UG63 623 aa22.79■■□□□ 1.24
CDK13-202ENST00000340829 IGHMBP2P38935 993 aaKnown RBP22.79■■□□□ 1.24
CDK13-202ENST00000340829 SH2B1Q9NRF2 756 aaPredicted RBP22.79■■□□□ 1.24
CDK13-202ENST00000340829 RBM10P98175 930 aaKnown RBP22.79■■□□□ 1.24
CDK13-202ENST00000340829 CHPF2Q9P2E5 772 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms