RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 OS9Q13438 667 aaPredicted RBP17.52■□□□□ 0.4
CPSF7-201ENST00000340437 ANXA1P04083 346 aa17.52■□□□□ 0.39
CPSF7-201ENST00000340437 CCT4P50991 539 aaKnown RBP17.52■□□□□ 0.39
CPSF7-201ENST00000340437 ESYT1Q9BSJ8 1104 aa17.51■□□□□ 0.39
CPSF7-201ENST00000340437 TMEM131LA2VDJ0 1609 aa17.51■□□□□ 0.39
CPSF7-201ENST00000340437 ATP10DQ9P241 1426 aa17.51■□□□□ 0.39
CPSF7-201ENST00000340437 NEO1Q92859 1461 aa17.5■□□□□ 0.39
CPSF7-201ENST00000340437 DNTTIP2Q5QJE6 756 aaKnown RBP17.5■□□□□ 0.39
CPSF7-201ENST00000340437 EYA1Q99502 592 aa17.5■□□□□ 0.39
CPSF7-201ENST00000340437 HDGFP51858 240 aaKnown RBP17.5■□□□□ 0.39
CPSF7-201ENST00000340437 ATP7BP35670 1465 aa17.5■□□□□ 0.39
CPSF7-201ENST00000340437 PHAXQ9H814 394 aaKnown RBP17.49■□□□□ 0.39
CPSF7-201ENST00000340437 UBTFL1P0CB47 393 aaPredicted RBP17.49■□□□□ 0.39
CPSF7-201ENST00000340437 CPSF1Q10570 1443 aaKnown RBP17.49■□□□□ 0.39
CPSF7-201ENST00000340437 CPA1P15085 419 aa17.49■□□□□ 0.39
CPSF7-201ENST00000340437 A0A0G2JS52 829 aa17.48■□□□□ 0.39
CPSF7-201ENST00000340437 GADD45BO75293 160 aaPredicted RBP17.48■□□□□ 0.39
CPSF7-201ENST00000340437 PPP1R9BQ96SB3 815 aa17.48■□□□□ 0.39
CPSF7-201ENST00000340437 CDK12Q9NYV4 1490 aaPredicted RBP17.48■□□□□ 0.39
CPSF7-201ENST00000340437 CHMLP26374 656 aa17.48■□□□□ 0.39
CPSF7-201ENST00000340437 ZNF445P59923 1031 aa17.48■□□□□ 0.39
CPSF7-201ENST00000340437 CHMP3Q9Y3E7 222 aa17.48■□□□□ 0.39
CPSF7-201ENST00000340437 CCDC30Q5VVM6 783 aa17.48■□□□□ 0.39
CPSF7-201ENST00000340437 AATKQ6ZMQ8 1374 aa17.47■□□□□ 0.39
CPSF7-201ENST00000340437 CYP2E1P05181 493 aaPredicted RBP17.47■□□□□ 0.39
CPSF7-201ENST00000340437 ZNF830Q96NB3 372 aaPredicted RBP17.47■□□□□ 0.39
CPSF7-201ENST00000340437 A2ML1A8K2U0 1454 aa17.47■□□□□ 0.39
CPSF7-201ENST00000340437 GNAI3P08754 354 aa17.47■□□□□ 0.39
CPSF7-201ENST00000340437 IL25Q9H293 177 aa17.47■□□□□ 0.39
CPSF7-201ENST00000340437 TAOK2Q9UL54 1235 aa17.46■□□□□ 0.39
CPSF7-201ENST00000340437 SPG7Q9UQ90 795 aa17.46■□□□□ 0.39
CPSF7-201ENST00000340437 HDGFL1Q5TGJ6 251 aa17.46■□□□□ 0.39
CPSF7-201ENST00000340437 CWC27Q6UX04 472 aaKnown RBP17.46■□□□□ 0.39
CPSF7-201ENST00000340437 ROBO2Q9HCK4 1378 aa17.46■□□□□ 0.39
CPSF7-201ENST00000340437 KIF20BQ96Q89 1820 aa17.46■□□□□ 0.39
CPSF7-201ENST00000340437 PREX1Q8TCU6 1659 aa17.46■□□□□ 0.39
CPSF7-201ENST00000340437 RGS12O14924 1447 aa17.45■□□□□ 0.38
CPSF7-201ENST00000340437 LRSAM1Q6UWE0 723 aa17.45■□□□□ 0.38
CPSF7-201ENST00000340437 SRGAP3O43295 1099 aa17.45■□□□□ 0.38
CPSF7-201ENST00000340437 ATP8B2P98198 1209 aa17.44■□□□□ 0.38
CPSF7-201ENST00000340437 PPP1R42Q7Z4L9 355 aa17.44■□□□□ 0.38
CPSF7-201ENST00000340437 FIBPO43427 364 aa17.44■□□□□ 0.38
CPSF7-201ENST00000340437 KNDC1Q76NI1 1749 aa17.43■□□□□ 0.38
CPSF7-201ENST00000340437 RRP9O43818 475 aaKnown RBP17.43■□□□□ 0.38
CPSF7-201ENST00000340437 CLEC17AQ6ZS10 378 aa17.43■□□□□ 0.38
CPSF7-201ENST00000340437 GNAT3A8MTJ3 354 aa17.43■□□□□ 0.38
CPSF7-201ENST00000340437 LTKP29376 864 aa17.43■□□□□ 0.38
CPSF7-201ENST00000340437 USP48Q86UV5 1035 aa17.43■□□□□ 0.38
CPSF7-201ENST00000340437 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.43■□□□□ 0.38
CPSF7-201ENST00000340437 TSPY26PQ9H489 355 aa17.43■□□□□ 0.38
CPSF7-201ENST00000340437 AMOTL2Q9Y2J4 779 aa17.42■□□□□ 0.38
CPSF7-201ENST00000340437 KIF24Q5T7B8 1368 aa17.42■□□□□ 0.38
CPSF7-201ENST00000340437 ABTB2Q8N961 1025 aa17.42■□□□□ 0.38
CPSF7-201ENST00000340437 CNPY2Q9Y2B0 182 aa17.42■□□□□ 0.38
CPSF7-201ENST00000340437 KCNJ4P48050 445 aa17.41■□□□□ 0.38
CPSF7-201ENST00000340437 USP44Q9H0E7 712 aa17.41■□□□□ 0.38
CPSF7-201ENST00000340437 ANKRD26Q9UPS8 1709 aa17.41■□□□□ 0.38
CPSF7-201ENST00000340437 OFD1O75665 1012 aa17.41■□□□□ 0.38
CPSF7-201ENST00000340437 KIAA0232Q92628 1395 aa17.41■□□□□ 0.38
CPSF7-201ENST00000340437 TAF7Q15545 349 aaPredicted RBP17.41■□□□□ 0.38
CPSF7-201ENST00000340437 DLG5Q8TDM6 1919 aa17.4■□□□□ 0.38
CPSF7-201ENST00000340437 MBD3O95983 291 aa17.4■□□□□ 0.38
CPSF7-201ENST00000340437 TPM2P07951 284 aa17.4■□□□□ 0.38
CPSF7-201ENST00000340437 IL17REQ8NFR9 667 aa17.4■□□□□ 0.38
CPSF7-201ENST00000340437 BRD1O95696 1058 aa17.4■□□□□ 0.38
CPSF7-201ENST00000340437 USP25Q9UHP3 1055 aa17.4■□□□□ 0.38
CPSF7-201ENST00000340437 UQCRHLA0A096LP55 91 aa17.4■□□□□ 0.38
CPSF7-201ENST00000340437 UQCRHP07919 91 aa17.4■□□□□ 0.38
CPSF7-201ENST00000340437 NBPF7P0C2Y1 421 aaPredicted RBP17.4■□□□□ 0.38
CPSF7-201ENST00000340437 TSPOAP1O95153 1857 aa17.39■□□□□ 0.38
CPSF7-201ENST00000340437 C17orf53Q8N3J3 647 aaPredicted RBP17.39■□□□□ 0.37
CPSF7-201ENST00000340437 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.39■□□□□ 0.37
CPSF7-201ENST00000340437 VPS37CA5D8V6 355 aaPredicted RBP17.39■□□□□ 0.37
CPSF7-201ENST00000340437 SYAP1Q96A49 352 aaPredicted RBP17.39■□□□□ 0.37
CPSF7-201ENST00000340437 SRCIN1Q9C0H9 1055 aa17.39■□□□□ 0.37
CPSF7-201ENST00000340437 MCM2P49736 904 aa17.38■□□□□ 0.37
CPSF7-201ENST00000340437 OSBPL3Q9H4L5 887 aa17.38■□□□□ 0.37
CPSF7-201ENST00000340437 CRB1P82279 1406 aa17.38■□□□□ 0.37
CPSF7-201ENST00000340437 PI4KAP2A4QPH2 592 aa17.38■□□□□ 0.37
CPSF7-201ENST00000340437 PI4KAP1Q8N8J0 262 aa17.38■□□□□ 0.37
CPSF7-201ENST00000340437 NOL7Q9UMY1 257 aaKnown RBP17.38■□□□□ 0.37
CPSF7-201ENST00000340437 KCNQ3O43525 872 aa17.37■□□□□ 0.37
CPSF7-201ENST00000340437 CCDC83Q8IWF9 413 aa17.37■□□□□ 0.37
CPSF7-201ENST00000340437 RHPN1Q8TCX5 695 aa17.37■□□□□ 0.37
CPSF7-201ENST00000340437 CASTP20810 708 aaKnown RBP17.37■□□□□ 0.37
CPSF7-201ENST00000340437 SMC3Q9UQE7 1217 aa17.37■□□□□ 0.37
CPSF7-201ENST00000340437 CCDC9Q9Y3X0 531 aaKnown RBP17.37■□□□□ 0.37
CPSF7-201ENST00000340437 CDC42BPGQ6DT37 1551 aa17.37■□□□□ 0.37
CPSF7-201ENST00000340437 HCLS1P14317 486 aaPredicted RBP17.37■□□□□ 0.37
CPSF7-201ENST00000340437 RASEFQ8IZ41 740 aa17.37■□□□□ 0.37
CPSF7-201ENST00000340437 ZMYND15Q9H091 742 aa17.37■□□□□ 0.37
CPSF7-201ENST00000340437 DIAPH3Q9NSV4 1193 aa17.37■□□□□ 0.37
CPSF7-201ENST00000340437 AIMP1Q12904 312 aaKnown RBP17.36■□□□□ 0.37
CPSF7-201ENST00000340437 JARID2Q92833 1246 aaPredicted RBP17.36■□□□□ 0.37
CPSF7-201ENST00000340437 TCEANC2Q96MN5 208 aa17.36■□□□□ 0.37
CPSF7-201ENST00000340437 CHPF2Q9P2E5 772 aa17.36■□□□□ 0.37
CPSF7-201ENST00000340437 CCDC39Q9UFE4 941 aa17.36■□□□□ 0.37
CPSF7-201ENST00000340437 PA2G4Q9UQ80 394 aaKnown RBP17.36■□□□□ 0.37
CPSF7-201ENST00000340437 ZKSCAN5Q9Y2L8 839 aa17.36■□□□□ 0.37
CPSF7-201ENST00000340437 EID1Q9Y6B2 187 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms