RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 SLC5A1P13866 664 aa15.5■□□□□ 0.07
LIN54-201ENST00000340417 TPTE2Q6XPS3 522 aa15.5■□□□□ 0.07
LIN54-201ENST00000340417 CRACR2BQ8N4Y2 399 aaPredicted RBP15.5■□□□□ 0.07
LIN54-201ENST00000340417 INTS3Q68E01 1043 aaKnown RBP15.49■□□□□ 0.07
LIN54-201ENST00000340417 FOXD4L1Q9NU39 408 aa15.49■□□□□ 0.07
LIN54-201ENST00000340417 FAM83GA6ND36 823 aa15.49■□□□□ 0.07
LIN54-201ENST00000340417 CCDC152Q4G0S7 254 aa15.49■□□□□ 0.07
LIN54-201ENST00000340417 MAP3K19Q56UN5 1328 aa15.49■□□□□ 0.07
LIN54-201ENST00000340417 IDH1O75874 414 aaKnown RBP15.49■□□□□ 0.07
LIN54-201ENST00000340417 JDP2Q8WYK2 163 aa15.49■□□□□ 0.07
LIN54-201ENST00000340417 COL17A1Q9UMD9 1497 aaPredicted RBP15.48■□□□□ 0.07
LIN54-201ENST00000340417 PRIM1P49642 420 aaKnown RBP15.48■□□□□ 0.07
LIN54-201ENST00000340417 LRRCC1Q9C099 1032 aa15.48■□□□□ 0.07
LIN54-201ENST00000340417 ATF7IPQ6VMQ6 1270 aa15.48■□□□□ 0.07
LIN54-201ENST00000340417 MAP3K2Q9Y2U5 619 aa15.48■□□□□ 0.07
LIN54-201ENST00000340417 MYO1BO43795 1136 aa15.48■□□□□ 0.07
LIN54-201ENST00000340417 AEBP1Q8IUX7 1158 aa15.48■□□□□ 0.07
LIN54-201ENST00000340417 SLF2Q8IX21 1173 aa15.48■□□□□ 0.07
LIN54-201ENST00000340417 RALGAPBQ86X10 1494 aa15.47■□□□□ 0.07
LIN54-201ENST00000340417 MPHOSPH10O00566 681 aaKnown RBP15.47■□□□□ 0.07
LIN54-201ENST00000340417 ERVK-7P63135 1459 aa15.47■□□□□ 0.07
LIN54-201ENST00000340417 GPR162Q16538 588 aa15.47■□□□□ 0.07
LIN54-201ENST00000340417 CSPP1Q1MSJ5 1256 aa15.47■□□□□ 0.07
LIN54-201ENST00000340417 POLKQ9UBT6 870 aa15.47■□□□□ 0.07
LIN54-201ENST00000340417 USP5P45974 858 aa15.47■□□□□ 0.07
LIN54-201ENST00000340417 EYA1Q99502 592 aa15.47■□□□□ 0.07
LIN54-201ENST00000340417 A0A1W2PP64 1363 aa15.47■□□□□ 0.07
LIN54-201ENST00000340417 PIK3C2GO75747 1445 aa15.46■□□□□ 0.07
LIN54-201ENST00000340417 TRIM44Q96DX7 344 aaPredicted RBP15.46■□□□□ 0.07
LIN54-201ENST00000340417 PREX2Q70Z35 1606 aa15.46■□□□□ 0.07
LIN54-201ENST00000340417 BCAR3O75815 825 aa15.46■□□□□ 0.07
LIN54-201ENST00000340417 L1TD1Q5T7N2 865 aaKnown RBP15.46■□□□□ 0.07
LIN54-201ENST00000340417 CREBRFQ8IUR6 639 aa15.46■□□□□ 0.07
LIN54-201ENST00000340417 ANKRD13DQ6ZTN6 518 aa15.46■□□□□ 0.07
LIN54-201ENST00000340417 UTP14AQ9BVJ6 771 aaKnown RBP15.46■□□□□ 0.07
LIN54-201ENST00000340417 TDO2P48775 406 aa15.46■□□□□ 0.06
LIN54-201ENST00000340417 ADCY10Q96PN6 1610 aa15.46■□□□□ 0.06
LIN54-201ENST00000340417 MBD5Q9P267 1494 aa15.45■□□□□ 0.06
LIN54-201ENST00000340417 SAFBQ15424 915 aaKnown RBP eCLIP15.45■□□□□ 0.06
LIN54-201ENST00000340417 KRT27Q7Z3Y8 459 aa15.45■□□□□ 0.06
LIN54-201ENST00000340417 LMOD1P29536 600 aaPredicted RBP15.45■□□□□ 0.06
LIN54-201ENST00000340417 HDAC9Q9UKV0 1011 aa15.45■□□□□ 0.06
LIN54-201ENST00000340417 ANKRD18AQ8IVF6 992 aa15.45■□□□□ 0.06
LIN54-201ENST00000340417 POLR3DP05423 398 aaPredicted RBP15.44■□□□□ 0.06
LIN54-201ENST00000340417 BRMS1Q9HCU9 246 aa15.44■□□□□ 0.06
LIN54-201ENST00000340417 XBP1P17861 261 aa15.44■□□□□ 0.06
LIN54-201ENST00000340417 LDHAL6AQ6ZMR3 332 aa15.44■□□□□ 0.06
LIN54-201ENST00000340417 CNKSR2Q8WXI2 1034 aa15.44■□□□□ 0.06
LIN54-201ENST00000340417 FAM196AQ6ZSG2 479 aa15.44■□□□□ 0.06
LIN54-201ENST00000340417 PZPP20742 1482 aa15.44■□□□□ 0.06
LIN54-201ENST00000340417 ANXA1P04083 346 aa15.43■□□□□ 0.06
LIN54-201ENST00000340417 PIP4K2AP48426 406 aaPredicted RBP15.43■□□□□ 0.06
LIN54-201ENST00000340417 MTHFSDQ2M296 383 aaKnown RBP15.43■□□□□ 0.06
LIN54-201ENST00000340417 FOXD4L5Q5VV16 416 aaPredicted RBP15.43■□□□□ 0.06
LIN54-201ENST00000340417 XAGE3Q8WTP9 111 aa15.43■□□□□ 0.06
LIN54-201ENST00000340417 FOXD4L4Q8WXT5 416 aaPredicted RBP15.43■□□□□ 0.06
LIN54-201ENST00000340417 GBP4Q96PP9 640 aa15.43■□□□□ 0.06
LIN54-201ENST00000340417 F6X3S4 739 aa15.43■□□□□ 0.06
LIN54-201ENST00000340417 CCDC87Q9NVE4 849 aa15.43■□□□□ 0.06
LIN54-201ENST00000340417 METP08581 1390 aa15.43■□□□□ 0.06
LIN54-201ENST00000340417 EDC4Q6P2E9 1401 aaKnown RBP15.43■□□□□ 0.06
LIN54-201ENST00000340417 FLIIQ13045 1269 aa15.42■□□□□ 0.06
LIN54-201ENST00000340417 OGFOD1Q8N543 542 aa15.42■□□□□ 0.06
LIN54-201ENST00000340417 KDM5CP41229 1560 aa15.42■□□□□ 0.06
LIN54-201ENST00000340417 ADGBQ8N7X0 1667 aa15.42■□□□□ 0.06
LIN54-201ENST00000340417 TRIM37O94972 964 aa15.42■□□□□ 0.06
LIN54-201ENST00000340417 UBE3BQ7Z3V4 1068 aa15.42■□□□□ 0.06
LIN54-201ENST00000340417 PLEKHH1Q9ULM0 1364 aa15.42■□□□□ 0.06
LIN54-201ENST00000340417 COPS6Q7L5N1 327 aa15.42■□□□□ 0.06
LIN54-201ENST00000340417 AIDAQ96BJ3 306 aa15.42■□□□□ 0.06
LIN54-201ENST00000340417 GCC1Q96CN9 775 aa15.42■□□□□ 0.06
LIN54-201ENST00000340417 RNMTO43148 476 aaKnown RBP15.41■□□□□ 0.06
LIN54-201ENST00000340417 CNBD1Q8NA66 436 aa15.41■□□□□ 0.06
LIN54-201ENST00000340417 ARHGEF12Q9NZN5 1544 aa15.41■□□□□ 0.06
LIN54-201ENST00000340417 KDM4AO75164 1064 aa15.41■□□□□ 0.06
LIN54-201ENST00000340417 PLEKHG3A1L390 1219 aa15.41■□□□□ 0.06
LIN54-201ENST00000340417 PSMA5P28066 241 aa15.41■□□□□ 0.06
LIN54-201ENST00000340417 SBNO1A3KN83 1393 aa15.41■□□□□ 0.06
LIN54-201ENST00000340417 KIAA2012Q0VF49 1180 aa15.41■□□□□ 0.06
LIN54-201ENST00000340417 DRC7Q8IY82 874 aa15.41■□□□□ 0.06
LIN54-201ENST00000340417 SLKQ9H2G2 1235 aaPredicted RBP15.41■□□□□ 0.06
LIN54-201ENST00000340417 MAP4K4O95819 1239 aaPredicted RBP15.41■□□□□ 0.06
LIN54-201ENST00000340417 TPM4P67936 248 aa15.41■□□□□ 0.06
LIN54-201ENST00000340417 WDR78Q5VTH9 848 aa15.41■□□□□ 0.06
LIN54-201ENST00000340417 IL1RAPL2Q9NP60 686 aa15.41■□□□□ 0.06
LIN54-201ENST00000340417 MAP3K5Q99683 1374 aa15.41■□□□□ 0.06
LIN54-201ENST00000340417 ZNF287Q9HBT7 754 aa15.4■□□□□ 0.06
LIN54-201ENST00000340417 NF2P35240 595 aa15.4■□□□□ 0.06
LIN54-201ENST00000340417 UNC5CLQ8IV45 518 aa15.4■□□□□ 0.06
LIN54-201ENST00000340417 CHPF2Q9P2E5 772 aa15.4■□□□□ 0.06
LIN54-201ENST00000340417 PI4KAP2A4QPH2 592 aa15.4■□□□□ 0.06
LIN54-201ENST00000340417 PDE3AQ14432 1141 aa15.4■□□□□ 0.06
LIN54-201ENST00000340417 PI4KAP1Q8N8J0 262 aa15.4■□□□□ 0.06
LIN54-201ENST00000340417 PIK3R4Q99570 1358 aa15.4■□□□□ 0.06
LIN54-201ENST00000340417 FLAD1Q8NFF5 587 aa15.4■□□□□ 0.06
LIN54-201ENST00000340417 JARID2Q92833 1246 aaPredicted RBP15.4■□□□□ 0.06
LIN54-201ENST00000340417 FOSBP53539 338 aa15.4■□□□□ 0.06
LIN54-201ENST00000340417 RBM17Q96I25 401 aaKnown RBP15.4■□□□□ 0.06
LIN54-201ENST00000340417 AFF2P51816 1311 aa15.39■□□□□ 0.05
LIN54-201ENST00000340417 A2ML1A8K2U0 1454 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms