RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 HEG1Q9ULI3 1381 aa13.32□□□□□ -0.28
TRAF3IP2-201ENST00000340026 GNAI2P04899 355 aa13.32□□□□□ -0.28
TRAF3IP2-201ENST00000340026 PRKCSHP14314 528 aaPredicted RBP13.32□□□□□ -0.28
TRAF3IP2-201ENST00000340026 GSPT1P15170 499 aaKnown RBP13.32□□□□□ -0.28
TRAF3IP2-201ENST00000340026 CIZ1Q9ULV3 898 aaPredicted RBP13.32□□□□□ -0.28
TRAF3IP2-201ENST00000340026 GSE1Q14687 1217 aa13.31□□□□□ -0.28
TRAF3IP2-201ENST00000340026 ESCO1Q5FWF5 840 aa13.31□□□□□ -0.28
TRAF3IP2-201ENST00000340026 G2E3Q7L622 706 aa13.31□□□□□ -0.28
TRAF3IP2-201ENST00000340026 IL27Q8NEV9 243 aa13.31□□□□□ -0.28
TRAF3IP2-201ENST00000340026 KIF2CQ99661 725 aa13.31□□□□□ -0.28
TRAF3IP2-201ENST00000340026 SALL3Q9BXA9 1300 aa13.31□□□□□ -0.28
TRAF3IP2-201ENST00000340026 NBPF6Q5VWK0 638 aa13.31□□□□□ -0.28
TRAF3IP2-201ENST00000340026 NBPF4Q96M43 638 aa13.31□□□□□ -0.28
TRAF3IP2-201ENST00000340026 CHMP5Q9NZZ3 219 aa13.3□□□□□ -0.28
TRAF3IP2-201ENST00000340026 COL18A1P39060 1754 aa13.3□□□□□ -0.28
TRAF3IP2-201ENST00000340026 GCP02774 474 aa13.3□□□□□ -0.28
TRAF3IP2-201ENST00000340026 PLEKHO1Q53GL0 409 aaPredicted RBP13.3□□□□□ -0.28
TRAF3IP2-201ENST00000340026 HSCBQ8IWL3 235 aa13.3□□□□□ -0.28
TRAF3IP2-201ENST00000340026 MIS18AQ9NYP9 233 aa13.3□□□□□ -0.28
TRAF3IP2-201ENST00000340026 AOX1Q06278 1338 aa13.29□□□□□ -0.28
TRAF3IP2-201ENST00000340026 C19orf44Q9H6X5 657 aa13.29□□□□□ -0.28
TRAF3IP2-201ENST00000340026 EIF4A1P60842 406 aaKnown RBP13.29□□□□□ -0.28
TRAF3IP2-201ENST00000340026 ATP8B2P98198 1209 aa13.29□□□□□ -0.28
TRAF3IP2-201ENST00000340026 EPB41L2O43491 1005 aaKnown RBP13.28□□□□□ -0.28
TRAF3IP2-201ENST00000340026 FRAT2O75474 233 aaPredicted RBP13.28□□□□□ -0.28
TRAF3IP2-201ENST00000340026 NUTM2GQ5VZR2 741 aa13.27□□□□□ -0.28
TRAF3IP2-201ENST00000340026 SCN11AQ9UI33 1791 aa13.27□□□□□ -0.29
TRAF3IP2-201ENST00000340026 IL17RAQ96F46 866 aa13.27□□□□□ -0.29
TRAF3IP2-201ENST00000340026 STAP2Q9UGK3 403 aa13.26□□□□□ -0.29
TRAF3IP2-201ENST00000340026 MRC1P22897 1456 aa13.26□□□□□ -0.29
TRAF3IP2-201ENST00000340026 STRCP1A6NGW2 1772 aa13.26□□□□□ -0.29
TRAF3IP2-201ENST00000340026 FKBP5Q13451 457 aaPredicted RBP13.26□□□□□ -0.29
TRAF3IP2-201ENST00000340026 SRCIN1Q9C0H9 1055 aa13.26□□□□□ -0.29
TRAF3IP2-201ENST00000340026 PKD1L3Q7Z443 1732 aa13.26□□□□□ -0.29
TRAF3IP2-201ENST00000340026 PARP4Q9UKK3 1724 aaKnown RBP13.26□□□□□ -0.29
TRAF3IP2-201ENST00000340026 DNAJC5Q9H3Z4 198 aa13.26□□□□□ -0.29
TRAF3IP2-201ENST00000340026 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.26□□□□□ -0.29
TRAF3IP2-201ENST00000340026 PXDNQ92626 1479 aa13.25□□□□□ -0.29
TRAF3IP2-201ENST00000340026 HDGFL1Q5TGJ6 251 aa13.25□□□□□ -0.29
TRAF3IP2-201ENST00000340026 CASC1Q6TDU7 716 aa13.25□□□□□ -0.29
TRAF3IP2-201ENST00000340026 SSH3Q8TE77 659 aa13.25□□□□□ -0.29
TRAF3IP2-201ENST00000340026 F6X3S4 739 aa13.25□□□□□ -0.29
TRAF3IP2-201ENST00000340026 RABEP1Q15276 862 aa13.25□□□□□ -0.29
TRAF3IP2-201ENST00000340026 ORAI2Q96SN7 254 aa13.25□□□□□ -0.29
TRAF3IP2-201ENST00000340026 RGPD5Q99666 1765 aa13.24□□□□□ -0.29
TRAF3IP2-201ENST00000340026 RAB11FIP3O75154 756 aa13.24□□□□□ -0.29
TRAF3IP2-201ENST00000340026 POLA2Q14181 598 aa13.24□□□□□ -0.29
TRAF3IP2-201ENST00000340026 USP44Q9H0E7 712 aa13.24□□□□□ -0.29
TRAF3IP2-201ENST00000340026 RNMTO43148 476 aaKnown RBP13.24□□□□□ -0.29
TRAF3IP2-201ENST00000340026 SDSP20132 328 aa13.24□□□□□ -0.29
TRAF3IP2-201ENST00000340026 PDE1AP54750 535 aa13.24□□□□□ -0.29
TRAF3IP2-201ENST00000340026 KRT28Q7Z3Y7 464 aa13.24□□□□□ -0.29
TRAF3IP2-201ENST00000340026 USP26Q9BXU7 913 aa13.24□□□□□ -0.29
TRAF3IP2-201ENST00000340026 ERBB3P21860 1342 aa13.23□□□□□ -0.29
TRAF3IP2-201ENST00000340026 ANKRD24Q8TF21 1146 aa13.23□□□□□ -0.29
TRAF3IP2-201ENST00000340026 LRRCC1Q9C099 1032 aa13.23□□□□□ -0.29
TRAF3IP2-201ENST00000340026 SLKQ9H2G2 1235 aaPredicted RBP13.23□□□□□ -0.29
TRAF3IP2-201ENST00000340026 MTX1Q13505 466 aa13.23□□□□□ -0.29
TRAF3IP2-201ENST00000340026 CLEC17AQ6ZS10 378 aa13.23□□□□□ -0.29
TRAF3IP2-201ENST00000340026 C14orf37Q86TY3 774 aa13.23□□□□□ -0.29
TRAF3IP2-201ENST00000340026 LTV1Q96GA3 475 aaPredicted RBP13.23□□□□□ -0.29
TRAF3IP2-201ENST00000340026 K7ELQ4 463 aaPredicted RBP13.22□□□□□ -0.29
TRAF3IP2-201ENST00000340026 REC8O95072 547 aa13.22□□□□□ -0.29
TRAF3IP2-201ENST00000340026 ZNF530Q6P9A1 599 aaPredicted RBP13.22□□□□□ -0.29
TRAF3IP2-201ENST00000340026 SLC4A10Q6U841 1118 aa13.22□□□□□ -0.29
TRAF3IP2-201ENST00000340026 PROSER2Q86WR7 435 aaPredicted RBP13.22□□□□□ -0.29
TRAF3IP2-201ENST00000340026 CPDO75976 1380 aa13.22□□□□□ -0.29
TRAF3IP2-201ENST00000340026 PTMSP20962 102 aa13.22□□□□□ -0.29
TRAF3IP2-201ENST00000340026 USHBP1Q8N6Y0 703 aa13.22□□□□□ -0.29
TRAF3IP2-201ENST00000340026 HDAC5Q9UQL6 1122 aa13.22□□□□□ -0.29
TRAF3IP2-201ENST00000340026 MCM4P33991 863 aa13.21□□□□□ -0.29
TRAF3IP2-201ENST00000340026 TEFQ10587 303 aa13.21□□□□□ -0.29
TRAF3IP2-201ENST00000340026 C16orf71Q8IYS4 520 aaPredicted RBP13.21□□□□□ -0.29
TRAF3IP2-201ENST00000340026 LGR6Q9HBX8 967 aa13.21□□□□□ -0.29
TRAF3IP2-201ENST00000340026 C1orf141Q5JVX7 400 aa13.21□□□□□ -0.29
TRAF3IP2-201ENST00000340026 BEND3Q5T5X7 828 aa13.21□□□□□ -0.29
TRAF3IP2-201ENST00000340026 DBF4Q9UBU7 674 aaPredicted RBP13.21□□□□□ -0.29
TRAF3IP2-201ENST00000340026 TNS3Q68CZ2 1445 aa13.21□□□□□ -0.29
TRAF3IP2-201ENST00000340026 USP42Q9H9J4 1324 aaKnown RBP13.21□□□□□ -0.3
TRAF3IP2-201ENST00000340026 BTBD11A6QL63 1104 aa13.2□□□□□ -0.3
TRAF3IP2-201ENST00000340026 ALDH1L1O75891 902 aa13.2□□□□□ -0.3
TRAF3IP2-201ENST00000340026 UBTFL1P0CB47 393 aaPredicted RBP13.2□□□□□ -0.3
TRAF3IP2-201ENST00000340026 OTUD7AQ8TE49 926 aaPredicted RBP13.2□□□□□ -0.3
TRAF3IP2-201ENST00000340026 DNAAF4Q8WXU2 420 aa13.2□□□□□ -0.3
TRAF3IP2-201ENST00000340026 ADCY9O60503 1353 aa13.2□□□□□ -0.3
TRAF3IP2-201ENST00000340026 DDX11L8A8MPP1 907 aa13.2□□□□□ -0.3
TRAF3IP2-201ENST00000340026 ERC2O15083 957 aa13.2□□□□□ -0.3
TRAF3IP2-201ENST00000340026 UTYO14607 1347 aa13.19□□□□□ -0.3
TRAF3IP2-201ENST00000340026 XIRP1Q702N8 1843 aaKnown RBP13.19□□□□□ -0.3
TRAF3IP2-201ENST00000340026 PNMA6EA0A0J9YXQ4 647 aa13.19□□□□□ -0.3
TRAF3IP2-201ENST00000340026 GIGYF1O75420 1035 aaPredicted RBP13.19□□□□□ -0.3
TRAF3IP2-201ENST00000340026 RAB3GAP1Q15042 981 aa13.19□□□□□ -0.3
TRAF3IP2-201ENST00000340026 HSP90AB4PQ58FF6 505 aa13.19□□□□□ -0.3
TRAF3IP2-201ENST00000340026 LRRC59Q96AG4 307 aaKnown RBP13.19□□□□□ -0.3
TRAF3IP2-201ENST00000340026 LRRFIP2Q9Y608 721 aaKnown RBP13.19□□□□□ -0.3
TRAF3IP2-201ENST00000340026 TMEM94Q12767 1356 aa13.19□□□□□ -0.3
TRAF3IP2-201ENST00000340026 NPHP3Q7Z494 1330 aa13.18□□□□□ -0.3
TRAF3IP2-201ENST00000340026 MX1P20591 662 aa13.18□□□□□ -0.3
TRAF3IP2-201ENST00000340026 ANAPC15P60006 121 aa13.18□□□□□ -0.3
TRAF3IP2-201ENST00000340026 SMARCA5O60264 1052 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 722.8 ms