RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 HSP90AB2PQ58FF8 381 aa25.21■■□□□ 1.63
SPNS1-203ENST00000334536 RIMS1Q86UR5 1692 aaKnown RBP25.2■■□□□ 1.63
SPNS1-203ENST00000334536 MYRIPQ8NFW9 859 aa25.2■■□□□ 1.62
SPNS1-203ENST00000334536 MCM10Q7L590 875 aa25.19■■□□□ 1.62
SPNS1-203ENST00000334536 PRIMPOLQ96LW4 560 aa25.19■■□□□ 1.62
SPNS1-203ENST00000334536 CCDC39Q9UFE4 941 aa25.19■■□□□ 1.62
SPNS1-203ENST00000334536 TBX22Q9Y458 520 aa25.19■■□□□ 1.62
SPNS1-203ENST00000334536 SLIT1O75093 1534 aa25.19■■□□□ 1.62
SPNS1-203ENST00000334536 SBNO1A3KN83 1393 aa25.19■■□□□ 1.62
SPNS1-203ENST00000334536 GTF2F1P35269 517 aaKnown RBP eCLIP25.19■■□□□ 1.62
SPNS1-203ENST00000334536 PLEKHM2Q8IWE5 1019 aa25.19■■□□□ 1.62
SPNS1-203ENST00000334536 KIF2CQ99661 725 aa25.19■■□□□ 1.62
SPNS1-203ENST00000334536 ARHGAP23Q9P227 1491 aa25.18■■□□□ 1.62
SPNS1-203ENST00000334536 ATP10DQ9P241 1426 aa25.18■■□□□ 1.62
SPNS1-203ENST00000334536 XPCQ01831 940 aaPredicted RBP25.18■■□□□ 1.62
SPNS1-203ENST00000334536 HMGN5P82970 282 aaKnown RBP25.17■■□□□ 1.62
SPNS1-203ENST00000334536 FLT4P35916 1363 aa25.17■■□□□ 1.62
SPNS1-203ENST00000334536 MAP3K19Q56UN5 1328 aa25.16■■□□□ 1.62
SPNS1-203ENST00000334536 AMOTL2Q9Y2J4 779 aa25.15■■□□□ 1.62
SPNS1-203ENST00000334536 KDRP35968 1356 aa25.15■■□□□ 1.62
SPNS1-203ENST00000334536 TTC22Q5TAA0 569 aa25.15■■□□□ 1.62
SPNS1-203ENST00000334536 CEP85Q6P2H3 762 aa25.15■■□□□ 1.62
SPNS1-203ENST00000334536 ADAMTSL3P82987 1691 aa25.15■■□□□ 1.62
SPNS1-203ENST00000334536 FMN2Q9NZ56 1722 aa25.14■■□□□ 1.62
SPNS1-203ENST00000334536 KRT24Q2M2I5 525 aa25.14■■□□□ 1.62
SPNS1-203ENST00000334536 RTL1A6NKG5 1358 aa25.14■■□□□ 1.62
SPNS1-203ENST00000334536 NUTM2FA1L443 756 aa25.13■■□□□ 1.61
SPNS1-203ENST00000334536 GSPT1P15170 499 aaKnown RBP25.13■■□□□ 1.61
SPNS1-203ENST00000334536 RTF1Q92541 710 aaKnown RBP25.13■■□□□ 1.61
SPNS1-203ENST00000334536 SLC26A8Q96RN1 970 aa25.13■■□□□ 1.61
SPNS1-203ENST00000334536 DIP2AQ14689 1571 aa25.13■■□□□ 1.61
SPNS1-203ENST00000334536 HTATSF1O43719 755 aaKnown RBP25.13■■□□□ 1.61
SPNS1-203ENST00000334536 GAS2L2Q8NHY3 880 aa25.12■■□□□ 1.61
SPNS1-203ENST00000334536 MSH6P52701 1360 aa25.12■■□□□ 1.61
SPNS1-203ENST00000334536 K7ELQ4 463 aaPredicted RBP25.11■■□□□ 1.61
SPNS1-203ENST00000334536 IGSF1Q8N6C5 1336 aa25.11■■□□□ 1.61
SPNS1-203ENST00000334536 MTHFSDQ2M296 383 aaKnown RBP25.1■■□□□ 1.61
SPNS1-203ENST00000334536 SLC4A2P04920 1241 aa25.1■■□□□ 1.61
SPNS1-203ENST00000334536 HMMRO75330 724 aa25.09■■□□□ 1.61
SPNS1-203ENST00000334536 CCT4P50991 539 aaKnown RBP25.09■■□□□ 1.61
SPNS1-203ENST00000334536 NGDNQ8NEJ9 315 aaKnown RBP25.09■■□□□ 1.61
SPNS1-203ENST00000334536 TSPYL4Q9UJ04 414 aa25.09■■□□□ 1.61
SPNS1-203ENST00000334536 ANKARQ7Z5J8 1434 aa25.09■■□□□ 1.61
SPNS1-203ENST00000334536 DDX49Q9Y6V7 483 aaKnown RBP25.08■■□□□ 1.61
SPNS1-203ENST00000334536 AMPHP49418 695 aa25.07■■□□□ 1.6
SPNS1-203ENST00000334536 SLC20A2Q08357 652 aa25.07■■□□□ 1.6
SPNS1-203ENST00000334536 RABEP1Q15276 862 aa25.07■■□□□ 1.6
SPNS1-203ENST00000334536 MEIS3Q99687 375 aa25.07■■□□□ 1.6
SPNS1-203ENST00000334536 SOS1Q07889 1333 aaPredicted RBP25.06■■□□□ 1.6
SPNS1-203ENST00000334536 EYA1Q99502 592 aa25.06■■□□□ 1.6
SPNS1-203ENST00000334536 CASC1Q6TDU7 716 aa25.05■■□□□ 1.6
SPNS1-203ENST00000334536 KIAA2012Q0VF49 1180 aa25.05■■□□□ 1.6
SPNS1-203ENST00000334536 THEMISQ8N1K5 641 aaPredicted RBP25.05■■□□□ 1.6
SPNS1-203ENST00000334536 SOX12O15370 315 aa25.04■■□□□ 1.6
SPNS1-203ENST00000334536 FOXO3O43524 673 aa25.04■■□□□ 1.6
SPNS1-203ENST00000334536 C16orf71Q8IYS4 520 aaPredicted RBP25.04■■□□□ 1.6
SPNS1-203ENST00000334536 PIK3C2AO00443 1686 aa25.03■■□□□ 1.6
SPNS1-203ENST00000334536 XRN1Q8IZH2 1706 aaKnown RBP25.02■■□□□ 1.6
SPNS1-203ENST00000334536 LRRC37A3O60309 1634 aa25.02■■□□□ 1.6
SPNS1-203ENST00000334536 ARID3AQ99856 593 aa25.02■■□□□ 1.6
SPNS1-203ENST00000334536 USP26Q9BXU7 913 aa25.02■■□□□ 1.6
SPNS1-203ENST00000334536 BABAM1Q9NWV8 329 aa25.02■■□□□ 1.6
SPNS1-203ENST00000334536 CEP170BQ9Y4F5 1589 aaPredicted RBP25.02■■□□□ 1.6
SPNS1-203ENST00000334536 USP54Q70EL1 1684 aa25.02■■□□□ 1.6
SPNS1-203ENST00000334536 CD2BP2O95400 341 aaKnown RBP25.02■■□□□ 1.6
SPNS1-203ENST00000334536 ZNF710Q8N1W2 664 aa25.02■■□□□ 1.6
SPNS1-203ENST00000334536 ZSCAN23Q3MJ62 389 aa25.01■■□□□ 1.59
SPNS1-203ENST00000334536 STK31Q9BXU1 1019 aa25.01■■□□□ 1.59
SPNS1-203ENST00000334536 OSBPL3Q9H4L5 887 aa25.01■■□□□ 1.59
SPNS1-203ENST00000334536 MIS18AQ9NYP9 233 aa25.01■■□□□ 1.59
SPNS1-203ENST00000334536 SDSP20132 328 aa25■■□□□ 1.59
SPNS1-203ENST00000334536 BAG4O95429 457 aaKnown RBP25■■□□□ 1.59
SPNS1-203ENST00000334536 CDK11BP21127 795 aaKnown RBP25■■□□□ 1.59
SPNS1-203ENST00000334536 CBX1P83916 185 aa25■■□□□ 1.59
SPNS1-203ENST00000334536 RBM42Q9BTD8 480 aaKnown RBP25■■□□□ 1.59
SPNS1-203ENST00000334536 CCDC30Q5VVM6 783 aa24.99■■□□□ 1.59
SPNS1-203ENST00000334536 G2E3Q7L622 706 aa24.99■■□□□ 1.59
SPNS1-203ENST00000334536 RBSNQ9H1K0 784 aa24.99■■□□□ 1.59
SPNS1-203ENST00000334536 GNAT3A8MTJ3 354 aa24.98■■□□□ 1.59
SPNS1-203ENST00000334536 GNAI2P04899 355 aa24.98■■□□□ 1.59
SPNS1-203ENST00000334536 OTUD7AQ8TE49 926 aaPredicted RBP24.98■■□□□ 1.59
SPNS1-203ENST00000334536 RGPD8O14715 1765 aaPredicted RBP24.98■■□□□ 1.59
SPNS1-203ENST00000334536 NLRP6P59044 892 aa24.98■■□□□ 1.59
SPNS1-203ENST00000334536 FEZ1Q99689 392 aa24.97■■□□□ 1.59
SPNS1-203ENST00000334536 SMARCA5O60264 1052 aaPredicted RBP24.96■■□□□ 1.59
SPNS1-203ENST00000334536 REC8O95072 547 aa24.96■■□□□ 1.59
SPNS1-203ENST00000334536 GNAI3P08754 354 aa24.96■■□□□ 1.59
SPNS1-203ENST00000334536 HOXC9P31274 260 aa24.96■■□□□ 1.59
SPNS1-203ENST00000334536 SLC4A10Q6U841 1118 aa24.96■■□□□ 1.59
SPNS1-203ENST00000334536 GABPB1Q06547 395 aaPredicted RBP24.95■■□□□ 1.58
SPNS1-203ENST00000334536 KIF3AQ9Y496 699 aa24.95■■□□□ 1.58
SPNS1-203ENST00000334536 ATP2B3Q16720 1220 aa24.95■■□□□ 1.58
SPNS1-203ENST00000334536 F6X3S4 739 aa24.94■■□□□ 1.58
SPNS1-203ENST00000334536 NWD1Q149M9 1564 aa24.94■■□□□ 1.58
SPNS1-203ENST00000334536 ZNF142P52746 1687 aaPredicted RBP24.94■■□□□ 1.58
SPNS1-203ENST00000334536 MAP3K5Q99683 1374 aa24.94■■□□□ 1.58
SPNS1-203ENST00000334536 ZNF830Q96NB3 372 aaPredicted RBP24.93■■□□□ 1.58
SPNS1-203ENST00000334536 NUCB2P80303 420 aa24.93■■□□□ 1.58
SPNS1-203ENST00000334536 FLIIQ13045 1269 aa24.93■■□□□ 1.58
SPNS1-203ENST00000334536 PDE1AP54750 535 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms