RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 SDF4Q9BRK5 362 aa17.9■□□□□ 0.46
C9orf47-201ENST00000334490 BLOC1S2Q6QNY1 142 aa17.9■□□□□ 0.46
C9orf47-201ENST00000334490 SASS6Q6UVJ0 657 aa17.9■□□□□ 0.46
C9orf47-201ENST00000334490 BOLA2Q9H3K6 86 aa17.9■□□□□ 0.46
C9orf47-201ENST00000334490 PTPRCP08575 1304 aa17.9■□□□□ 0.46
C9orf47-201ENST00000334490 MX1P20591 662 aa17.9■□□□□ 0.46
C9orf47-201ENST00000334490 SLC39A6Q13433 755 aa17.9■□□□□ 0.46
C9orf47-201ENST00000334490 NUP133Q8WUM0 1156 aa17.9■□□□□ 0.46
C9orf47-201ENST00000334490 RPGRQ92834 1020 aaKnown RBP17.9■□□□□ 0.46
C9orf47-201ENST00000334490 LMTK3Q96Q04 1460 aa17.9■□□□□ 0.46
C9orf47-201ENST00000334490 ANKRD18BA2A2Z9 1011 aa17.89■□□□□ 0.46
C9orf47-201ENST00000334490 UHRF1BP1Q6BDS2 1440 aa17.89■□□□□ 0.45
C9orf47-201ENST00000334490 TRIM22Q8IYM9 498 aa17.89■□□□□ 0.45
C9orf47-201ENST00000334490 TMOD2Q9NZR1 351 aa17.89■□□□□ 0.45
C9orf47-201ENST00000334490 YTHDC2Q9H6S0 1430 aaKnown RBP17.89■□□□□ 0.45
C9orf47-201ENST00000334490 ANKRD1Q15327 319 aa17.89■□□□□ 0.45
C9orf47-201ENST00000334490 UBE3BQ7Z3V4 1068 aa17.89■□□□□ 0.45
C9orf47-201ENST00000334490 CCDC69A6NI79 296 aa17.88■□□□□ 0.45
C9orf47-201ENST00000334490 KAT6BQ8WYB5 2073 aa17.88■□□□□ 0.45
C9orf47-201ENST00000334490 MAPKBP1O60336 1514 aa17.88■□□□□ 0.45
C9orf47-201ENST00000334490 ATP7AQ04656 1500 aa17.88■□□□□ 0.45
C9orf47-201ENST00000334490 CCDC8Q9H0W5 538 aaPredicted RBP17.88■□□□□ 0.45
C9orf47-201ENST00000334490 NPATQ14207 1427 aa17.88■□□□□ 0.45
C9orf47-201ENST00000334490 RFC4P35249 363 aa17.88■□□□□ 0.45
C9orf47-201ENST00000334490 UBAC1Q9BSL1 405 aa17.88■□□□□ 0.45
C9orf47-201ENST00000334490 ZNF219Q9P2Y4 722 aaPredicted RBP17.88■□□□□ 0.45
C9orf47-201ENST00000334490 CWC25Q9NXE8 425 aaPredicted RBP17.88■□□□□ 0.45
C9orf47-201ENST00000334490 FLT4P35916 1363 aa17.87■□□□□ 0.45
C9orf47-201ENST00000334490 IL2RBP14784 551 aa17.87■□□□□ 0.45
C9orf47-201ENST00000334490 ANKRD13DQ6ZTN6 518 aa17.87■□□□□ 0.45
C9orf47-201ENST00000334490 IL16Q14005 1332 aa17.87■□□□□ 0.45
C9orf47-201ENST00000334490 AKAP4Q5JQC9 854 aa17.87■□□□□ 0.45
C9orf47-201ENST00000334490 ANO8Q9HCE9 1232 aaPredicted RBP17.86■□□□□ 0.45
C9orf47-201ENST00000334490 JAKMIP1Q96N16 626 aaKnown RBP17.86■□□□□ 0.45
C9orf47-201ENST00000334490 LDHAL6AQ6ZMR3 332 aa17.86■□□□□ 0.45
C9orf47-201ENST00000334490 ASXL1Q8IXJ9 1541 aa17.86■□□□□ 0.45
C9orf47-201ENST00000334490 GSE1Q14687 1217 aa17.86■□□□□ 0.45
C9orf47-201ENST00000334490 PIK3R4Q99570 1358 aa17.85■□□□□ 0.45
C9orf47-201ENST00000334490 ORAI2Q96SN7 254 aa17.85■□□□□ 0.45
C9orf47-201ENST00000334490 IPO7O95373 1038 aaKnown RBP17.85■□□□□ 0.45
C9orf47-201ENST00000334490 CFAP43Q8NDM7 1665 aa17.85■□□□□ 0.45
C9orf47-201ENST00000334490 SLC5A1P13866 664 aa17.85■□□□□ 0.45
C9orf47-201ENST00000334490 PPP1R42Q7Z4L9 355 aa17.85■□□□□ 0.45
C9orf47-201ENST00000334490 C6orf229H3BNL8 230 aa17.84■□□□□ 0.45
C9orf47-201ENST00000334490 ATP6V1AP38606 617 aa17.84■□□□□ 0.45
C9orf47-201ENST00000334490 JARID2Q92833 1246 aaPredicted RBP17.84■□□□□ 0.45
C9orf47-201ENST00000334490 CARD14Q9BXL6 1004 aa17.84■□□□□ 0.45
C9orf47-201ENST00000334490 KRT32Q14532 448 aa17.84■□□□□ 0.45
C9orf47-201ENST00000334490 BACH2Q9BYV9 841 aa17.84■□□□□ 0.45
C9orf47-201ENST00000334490 MTHFSDQ2M296 383 aaKnown RBP17.84■□□□□ 0.45
C9orf47-201ENST00000334490 ABCC1P33527 1531 aa17.84■□□□□ 0.45
C9orf47-201ENST00000334490 CEBPZQ03701 1054 aaKnown RBP17.83■□□□□ 0.45
C9orf47-201ENST00000334490 STK38Q15208 465 aa17.83■□□□□ 0.45
C9orf47-201ENST00000334490 IMMTQ16891 758 aaKnown RBP17.83■□□□□ 0.45
C9orf47-201ENST00000334490 CDC5LQ99459 802 aaKnown RBP17.83■□□□□ 0.45
C9orf47-201ENST00000334490 EYA1Q99502 592 aa17.83■□□□□ 0.45
C9orf47-201ENST00000334490 CHPF2Q9P2E5 772 aa17.83■□□□□ 0.45
C9orf47-201ENST00000334490 TRPM2O94759 1503 aa17.83■□□□□ 0.44
C9orf47-201ENST00000334490 DZIP1Q86YF9 867 aaKnown RBP17.83■□□□□ 0.44
C9orf47-201ENST00000334490 COPS6Q7L5N1 327 aa17.83■□□□□ 0.44
C9orf47-201ENST00000334490 XAGE3Q8WTP9 111 aa17.83■□□□□ 0.44
C9orf47-201ENST00000334490 SMARCC1Q92922 1105 aaPredicted RBP17.83■□□□□ 0.44
C9orf47-201ENST00000334490 A0A1W2PP64 1363 aa17.83■□□□□ 0.44
C9orf47-201ENST00000334490 FIBPO43427 364 aa17.82■□□□□ 0.44
C9orf47-201ENST00000334490 MAP3K12Q12852 859 aa17.82■□□□□ 0.44
C9orf47-201ENST00000334490 DDX46Q7L014 1031 aaKnown RBP17.82■□□□□ 0.44
C9orf47-201ENST00000334490 NEO1Q92859 1461 aa17.82■□□□□ 0.44
C9orf47-201ENST00000334490 MAP3K19Q56UN5 1328 aa17.82■□□□□ 0.44
C9orf47-201ENST00000334490 USP5P45974 858 aa17.82■□□□□ 0.44
C9orf47-201ENST00000334490 PDRG1Q9NUG6 133 aa17.82■□□□□ 0.44
C9orf47-201ENST00000334490 SOGA3Q5TF21 947 aa17.82■□□□□ 0.44
C9orf47-201ENST00000334490 NFATC2IPQ8NCF5 419 aa17.82■□□□□ 0.44
C9orf47-201ENST00000334490 NBPF6Q5VWK0 638 aa17.82■□□□□ 0.44
C9orf47-201ENST00000334490 NBPF5PQ86XG9 351 aaPredicted RBP17.82■□□□□ 0.44
C9orf47-201ENST00000334490 NBPF4Q96M43 638 aa17.82■□□□□ 0.44
C9orf47-201ENST00000334490 MINDY4BA8MYZ0 360 aa17.81■□□□□ 0.44
C9orf47-201ENST00000334490 CDK5RAP3Q96JB5 506 aa17.81■□□□□ 0.44
C9orf47-201ENST00000334490 ZNF396Q96N95 335 aaPredicted RBP17.81■□□□□ 0.44
C9orf47-201ENST00000334490 BTG4Q9NY30 223 aa17.81■□□□□ 0.44
C9orf47-201ENST00000334490 PZPP20742 1482 aa17.81■□□□□ 0.44
C9orf47-201ENST00000334490 DNMT1P26358 1616 aaKnown RBP17.81■□□□□ 0.44
C9orf47-201ENST00000334490 KINO60870 393 aaKnown RBP17.8■□□□□ 0.44
C9orf47-201ENST00000334490 TXLNAP40222 546 aa17.8■□□□□ 0.44
C9orf47-201ENST00000334490 IP6K1Q92551 441 aa17.8■□□□□ 0.44
C9orf47-201ENST00000334490 POLR3DP05423 398 aaPredicted RBP17.8■□□□□ 0.44
C9orf47-201ENST00000334490 HOXC9P31274 260 aa17.8■□□□□ 0.44
C9orf47-201ENST00000334490 LARP1BQ659C4 914 aaKnown RBP17.79■□□□□ 0.44
C9orf47-201ENST00000334490 R3HCC1Q9Y3T6 440 aaKnown RBP17.79■□□□□ 0.44
C9orf47-201ENST00000334490 U3KPZ7 1027 aaPredicted RBP17.79■□□□□ 0.44
C9orf47-201ENST00000334490 OLFM4Q6UX06 510 aa17.79■□□□□ 0.44
C9orf47-201ENST00000334490 NAPBQ9H115 298 aa17.79■□□□□ 0.44
C9orf47-201ENST00000334490 PIP4K2AP48426 406 aaPredicted RBP17.79■□□□□ 0.44
C9orf47-201ENST00000334490 K7ELQ4 463 aaPredicted RBP17.79■□□□□ 0.44
C9orf47-201ENST00000334490 ZNF622Q969S3 477 aaKnown RBP eCLIP17.79■□□□□ 0.44
C9orf47-201ENST00000334490 CRACR2BQ8N4Y2 399 aaPredicted RBP17.78■□□□□ 0.44
C9orf47-201ENST00000334490 C8orf58Q8NAV2 365 aa17.78■□□□□ 0.44
C9orf47-201ENST00000334490 TARBP1Q13395 1621 aaKnown RBP17.78■□□□□ 0.44
C9orf47-201ENST00000334490 JMYQ8N9B5 988 aa17.78■□□□□ 0.44
C9orf47-201ENST00000334490 CDKL5O76039 1030 aa17.78■□□□□ 0.44
C9orf47-201ENST00000334490 NFKBIBQ15653 356 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms