RNA–Protein interactions for RNA: ENST00000333628.3

TUBB2A-201, Transcript of tubulin beta 2A class IIa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB2A, Length 1,595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB2A-201ENST00000333628 LGR6Q9HBX8 967 aa17.6■□□□□ 0.41
TUBB2A-201ENST00000333628 MAPK8IP3Q9UPT6 1336 aa17.6■□□□□ 0.41
TUBB2A-201ENST00000333628 GNAT3A8MTJ3 354 aa17.59■□□□□ 0.41
TUBB2A-201ENST00000333628 KCNQ4P56696 695 aa17.59■□□□□ 0.41
TUBB2A-201ENST00000333628 LRRC4BQ9NT99 713 aa17.59■□□□□ 0.41
TUBB2A-201ENST00000333628 SCN11AQ9UI33 1791 aa17.58■□□□□ 0.41
TUBB2A-201ENST00000333628 PIGBQ92521 554 aa17.58■□□□□ 0.41
TUBB2A-201ENST00000333628 PAPPAQ13219 1627 aa17.58■□□□□ 0.41
TUBB2A-201ENST00000333628 KDM6AO15550 1401 aaPredicted RBP17.58■□□□□ 0.4
TUBB2A-201ENST00000333628 ERVV-2B6SEH9 535 aa17.57■□□□□ 0.4
TUBB2A-201ENST00000333628 NFE2L2Q16236 605 aa17.57■□□□□ 0.4
TUBB2A-201ENST00000333628 RNF123Q5XPI4 1314 aa17.57■□□□□ 0.4
TUBB2A-201ENST00000333628 MAP3K5Q99683 1374 aa17.57■□□□□ 0.4
TUBB2A-201ENST00000333628 RNMTO43148 476 aaKnown RBP17.57■□□□□ 0.4
TUBB2A-201ENST00000333628 IL17REQ8NFR9 667 aa17.57■□□□□ 0.4
TUBB2A-201ENST00000333628 TMPOP42166 694 aaKnown RBP17.55■□□□□ 0.4
TUBB2A-201ENST00000333628 CABP4P57796 275 aa17.55■□□□□ 0.4
TUBB2A-201ENST00000333628 TMOD3Q9NYL9 352 aa17.55■□□□□ 0.4
TUBB2A-201ENST00000333628 RBM19Q9Y4C8 960 aaKnown RBP17.55■□□□□ 0.4
TUBB2A-201ENST00000333628 TAF1LQ8IZX4 1826 aa17.54■□□□□ 0.4
TUBB2A-201ENST00000333628 PALLDQ8WX93 1383 aa17.54■□□□□ 0.4
TUBB2A-201ENST00000333628 HTATSF1O43719 755 aaKnown RBP17.54■□□□□ 0.4
TUBB2A-201ENST00000333628 RIPK4P57078 832 aa17.54■□□□□ 0.4
TUBB2A-201ENST00000333628 NFATC2IPQ8NCF5 419 aa17.54■□□□□ 0.4
TUBB2A-201ENST00000333628 RTF1Q92541 710 aaKnown RBP17.54■□□□□ 0.4
TUBB2A-201ENST00000333628 APAF1O14727 1248 aa17.53■□□□□ 0.4
TUBB2A-201ENST00000333628 SLC27A3Q5K4L6 730 aa17.53■□□□□ 0.4
TUBB2A-201ENST00000333628 CCNL1Q9UK58 526 aaPredicted RBP17.53■□□□□ 0.4
TUBB2A-201ENST00000333628 RRP7AQ9Y3A4 280 aaKnown RBP17.53■□□□□ 0.4
TUBB2A-201ENST00000333628 TUBGCP6Q96RT7 1819 aa17.53■□□□□ 0.4
TUBB2A-201ENST00000333628 DCTN1Q14203 1278 aa17.53■□□□□ 0.4
TUBB2A-201ENST00000333628 NEUROD2Q15784 382 aa17.53■□□□□ 0.4
TUBB2A-201ENST00000333628 SLC15A2Q16348 729 aa17.53■□□□□ 0.4
TUBB2A-201ENST00000333628 MCM10Q7L590 875 aa17.53■□□□□ 0.4
TUBB2A-201ENST00000333628 PDGFDQ9GZP0 370 aaPredicted RBP17.53■□□□□ 0.4
TUBB2A-201ENST00000333628 SLC52A2Q9HAB3 445 aa17.53■□□□□ 0.4
TUBB2A-201ENST00000333628 STK32BQ9NY57 414 aa17.53■□□□□ 0.4
TUBB2A-201ENST00000333628 ASAP1Q9ULH1 1129 aa17.53■□□□□ 0.4
TUBB2A-201ENST00000333628 C5P01031 1676 aa17.52■□□□□ 0.4
TUBB2A-201ENST00000333628 CASZ1Q86V15 1759 aa17.52■□□□□ 0.4
TUBB2A-201ENST00000333628 ZNF827Q17R98 1081 aa17.52■□□□□ 0.39
TUBB2A-201ENST00000333628 ADAMTS7Q9UKP4 1686 aa17.51■□□□□ 0.39
TUBB2A-201ENST00000333628 CEMIPQ8WUJ3 1361 aa17.51■□□□□ 0.39
TUBB2A-201ENST00000333628 ATG3Q9NT62 314 aa17.5■□□□□ 0.39
TUBB2A-201ENST00000333628 DLG5Q8TDM6 1919 aa17.5■□□□□ 0.39
TUBB2A-201ENST00000333628 TEFQ10587 303 aa17.49■□□□□ 0.39
TUBB2A-201ENST00000333628 SMARCC1Q92922 1105 aaPredicted RBP17.49■□□□□ 0.39
TUBB2A-201ENST00000333628 LRP5O75197 1615 aa17.49■□□□□ 0.39
TUBB2A-201ENST00000333628 SENP3-EIF4A1A0A087X0R7 540 aa17.49■□□□□ 0.39
TUBB2A-201ENST00000333628 AKT1S1Q96B36 256 aa17.49■□□□□ 0.39
TUBB2A-201ENST00000333628 TRIM35Q9UPQ4 493 aa17.49■□□□□ 0.39
TUBB2A-201ENST00000333628 FANCIQ9NVI1 1328 aa17.48■□□□□ 0.39
TUBB2A-201ENST00000333628 THUMPD2Q9BTF0 503 aaKnown RBP17.48■□□□□ 0.39
TUBB2A-201ENST00000333628 QSER1Q2KHR3 1735 aa17.47■□□□□ 0.39
TUBB2A-201ENST00000333628 LMOD3Q0VAK6 560 aa17.47■□□□□ 0.39
TUBB2A-201ENST00000333628 LOC102724428A0A0B4J2F2 783 aa17.46■□□□□ 0.39
TUBB2A-201ENST00000333628 SIK1P57059 783 aa17.46■□□□□ 0.39
TUBB2A-201ENST00000333628 ANP32EQ9BTT0 268 aa17.46■□□□□ 0.39
TUBB2A-201ENST00000333628 C4BP0C0L5 1744 aa17.46■□□□□ 0.39
TUBB2A-201ENST00000333628 MRC1P22897 1456 aa17.46■□□□□ 0.39
TUBB2A-201ENST00000333628 SLC39A6Q13433 755 aa17.45■□□□□ 0.38
TUBB2A-201ENST00000333628 TAF7Q15545 349 aaPredicted RBP17.45■□□□□ 0.38
TUBB2A-201ENST00000333628 SLC4A9Q96Q91 983 aa17.45■□□□□ 0.38
TUBB2A-201ENST00000333628 SIPA1L3O60292 1781 aaPredicted RBP17.44■□□□□ 0.38
TUBB2A-201ENST00000333628 BTBD11A6QL63 1104 aa17.44■□□□□ 0.38
TUBB2A-201ENST00000333628 IRX6P78412 446 aaPredicted RBP17.44■□□□□ 0.38
TUBB2A-201ENST00000333628 ITPK1Q13572 414 aa17.44■□□□□ 0.38
TUBB2A-201ENST00000333628 RBM42Q9BTD8 480 aaKnown RBP17.44■□□□□ 0.38
TUBB2A-201ENST00000333628 TFCP2L1Q9NZI6 479 aa17.44■□□□□ 0.38
TUBB2A-201ENST00000333628 ZBTB7AO95365 584 aa17.43■□□□□ 0.38
TUBB2A-201ENST00000333628 ATP6V1AP38606 617 aa17.43■□□□□ 0.38
TUBB2A-201ENST00000333628 UBR3Q6ZT12 1888 aa17.43■□□□□ 0.38
TUBB2A-201ENST00000333628 ZNF831Q5JPB2 1677 aa17.43■□□□□ 0.38
TUBB2A-201ENST00000333628 PNPLA7Q6ZV29 1317 aa17.43■□□□□ 0.38
TUBB2A-201ENST00000333628 COL5A3P25940 1745 aaPredicted RBP17.42■□□□□ 0.38
TUBB2A-201ENST00000333628 PTCD1O75127 700 aaKnown RBP17.42■□□□□ 0.38
TUBB2A-201ENST00000333628 LINC00116Q8NCU8 138 aa17.42■□□□□ 0.38
TUBB2A-201ENST00000333628 MIS18AQ9NYP9 233 aa17.42■□□□□ 0.38
TUBB2A-201ENST00000333628 SALL2Q9Y467 1007 aaPredicted RBP17.42■□□□□ 0.38
TUBB2A-201ENST00000333628 NCBP3Q53F19 620 aaKnown RBP17.41■□□□□ 0.38
TUBB2A-201ENST00000333628 ZNF790Q6PG37 636 aa17.41■□□□□ 0.38
TUBB2A-201ENST00000333628 TJP1Q07157 1748 aa17.41■□□□□ 0.38
TUBB2A-201ENST00000333628 KCNQ3O43525 872 aa17.4■□□□□ 0.38
TUBB2A-201ENST00000333628 CCDC27Q2M243 656 aa17.4■□□□□ 0.38
TUBB2A-201ENST00000333628 ATF5Q9Y2D1 282 aaPredicted RBP17.4■□□□□ 0.38
TUBB2A-201ENST00000333628 MYH14Q7Z406 1995 aaKnown RBP17.4■□□□□ 0.38
TUBB2A-201ENST00000333628 SMIM5Q71RC9 77 aa17.4■□□□□ 0.38
TUBB2A-201ENST00000333628 AMIGO3Q86WK7 504 aa17.4■□□□□ 0.38
TUBB2A-201ENST00000333628 WWC1Q8IX03 1113 aa17.4■□□□□ 0.38
TUBB2A-201ENST00000333628 TTC5Q8N0Z6 440 aa17.4■□□□□ 0.38
TUBB2A-201ENST00000333628 SPON1Q9HCB6 807 aa17.4■□□□□ 0.38
TUBB2A-201ENST00000333628 UBR2Q8IWV8 1755 aa17.39■□□□□ 0.37
TUBB2A-201ENST00000333628 COL23A1Q86Y22 540 aaPredicted RBP17.38■□□□□ 0.37
TUBB2A-201ENST00000333628 LAS1LQ9Y4W2 734 aaKnown RBP17.38■□□□□ 0.37
TUBB2A-201ENST00000333628 KCPQ6ZWJ8 1503 aa17.37■□□□□ 0.37
TUBB2A-201ENST00000333628 NGEFQ8N5V2 710 aa17.37■□□□□ 0.37
TUBB2A-201ENST00000333628 ZNF496Q96IT1 587 aaPredicted RBP17.37■□□□□ 0.37
TUBB2A-201ENST00000333628 AK7Q96M32 723 aa17.37■□□□□ 0.37
TUBB2A-201ENST00000333628 CICQ96RK0 1608 aaPredicted RBP17.37■□□□□ 0.37
TUBB2A-201ENST00000333628 CHL1O00533 1208 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms