RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 CCT2P78371 535 aaKnown RBP12.35□□□□□ -0.43
CLN8-201ENST00000331222 ZNF444Q8N0Y2 327 aaPredicted RBP12.35□□□□□ -0.43
CLN8-201ENST00000331222 SRRTQ9BXP5 876 aaKnown RBP12.35□□□□□ -0.43
CLN8-201ENST00000331222 F8W031 263 aaPredicted RBP12.35□□□□□ -0.43
CLN8-201ENST00000331222 TAF4BQ92750 862 aa12.35□□□□□ -0.43
CLN8-201ENST00000331222 FEZ1Q99689 392 aa12.35□□□□□ -0.43
CLN8-201ENST00000331222 GSTTP1A0A1W2PQM5 241 aa12.34□□□□□ -0.43
CLN8-201ENST00000331222 POTEJP0CG39 1038 aa12.34□□□□□ -0.43
CLN8-201ENST00000331222 ZNF397Q8NF99 534 aaPredicted RBP12.34□□□□□ -0.43
CLN8-201ENST00000331222 MRE11P49959 708 aa12.34□□□□□ -0.43
CLN8-201ENST00000331222 CCT4P50991 539 aaKnown RBP12.34□□□□□ -0.43
CLN8-201ENST00000331222 CACNA2D4Q7Z3S7 1137 aa12.34□□□□□ -0.43
CLN8-201ENST00000331222 NGLY1Q96IV0 654 aa12.34□□□□□ -0.43
CLN8-201ENST00000331222 ZFP91Q96JP5 570 aaPredicted RBP12.34□□□□□ -0.43
CLN8-201ENST00000331222 CLEC11AQ9Y240 323 aa12.34□□□□□ -0.43
CLN8-201ENST00000331222 FANCD2Q9BXW9 1451 aa12.34□□□□□ -0.43
CLN8-201ENST00000331222 AKNAQ7Z591 1439 aa12.34□□□□□ -0.43
CLN8-201ENST00000331222 UPF3BQ9BZI7 483 aaKnown RBP12.34□□□□□ -0.43
CLN8-201ENST00000331222 CTNNA2P26232 953 aa12.33□□□□□ -0.43
CLN8-201ENST00000331222 CCDC8Q9H0W5 538 aaPredicted RBP12.33□□□□□ -0.43
CLN8-201ENST00000331222 DPH6Q7L8W6 267 aa12.33□□□□□ -0.44
CLN8-201ENST00000331222 TICAM2Q86XR7 235 aa12.33□□□□□ -0.44
CLN8-201ENST00000331222 PRPF4BQ13523 1007 aaKnown RBP12.33□□□□□ -0.44
CLN8-201ENST00000331222 CCDC150Q8NCX0 1101 aa12.33□□□□□ -0.44
CLN8-201ENST00000331222 UQCRHLA0A096LP55 91 aa12.33□□□□□ -0.44
CLN8-201ENST00000331222 UQCRHP07919 91 aa12.33□□□□□ -0.44
CLN8-201ENST00000331222 MRPS9P82933 396 aaKnown RBP12.33□□□□□ -0.44
CLN8-201ENST00000331222 CDKL5O76039 1030 aa12.33□□□□□ -0.44
CLN8-201ENST00000331222 AEBP1Q8IUX7 1158 aa12.33□□□□□ -0.44
CLN8-201ENST00000331222 ARL1P40616 181 aaPredicted RBP12.32□□□□□ -0.44
CLN8-201ENST00000331222 CHD1LQ86WJ1 897 aa12.32□□□□□ -0.44
CLN8-201ENST00000331222 NAPBQ9H115 298 aa12.32□□□□□ -0.44
CLN8-201ENST00000331222 CCDC7Q96M83 1385 aa12.32□□□□□ -0.44
CLN8-201ENST00000331222 ZNF652Q9Y2D9 606 aa12.32□□□□□ -0.44
CLN8-201ENST00000331222 TMCO5BA8MYB1 307 aa12.32□□□□□ -0.44
CLN8-201ENST00000331222 WDHD1O75717 1129 aaPredicted RBP12.32□□□□□ -0.44
CLN8-201ENST00000331222 RABEP1Q15276 862 aa12.32□□□□□ -0.44
CLN8-201ENST00000331222 WAPLQ7Z5K2 1190 aa12.32□□□□□ -0.44
CLN8-201ENST00000331222 CCDC91Q7Z6B0 441 aa12.32□□□□□ -0.44
CLN8-201ENST00000331222 PANK2Q9BZ23 570 aa12.32□□□□□ -0.44
CLN8-201ENST00000331222 K7ELQ4 463 aaPredicted RBP12.32□□□□□ -0.44
CLN8-201ENST00000331222 RAPGEF3O95398 923 aa12.32□□□□□ -0.44
CLN8-201ENST00000331222 CUL5Q93034 780 aa12.32□□□□□ -0.44
CLN8-201ENST00000331222 LARP1Q6PKG0 1096 aaKnown RBP12.31□□□□□ -0.44
CLN8-201ENST00000331222 NCAPD3P42695 1498 aa12.31□□□□□ -0.44
CLN8-201ENST00000331222 GNAT3A8MTJ3 354 aa12.31□□□□□ -0.44
CLN8-201ENST00000331222 MAP3K9P80192 1104 aa12.31□□□□□ -0.44
CLN8-201ENST00000331222 PLS1Q14651 629 aa12.31□□□□□ -0.44
CLN8-201ENST00000331222 SMC1AQ14683 1233 aaKnown RBP12.31□□□□□ -0.44
CLN8-201ENST00000331222 ANKLE2Q86XL3 938 aa12.31□□□□□ -0.44
CLN8-201ENST00000331222 GOLGA6L7A0A1B0GV03 622 aa12.31□□□□□ -0.44
CLN8-201ENST00000331222 RBM25P49756 843 aaKnown RBP12.31□□□□□ -0.44
CLN8-201ENST00000331222 NUP62CLQ9H1M0 184 aa12.31□□□□□ -0.44
CLN8-201ENST00000331222 RTEL1-TNFRSF6BF6WH68 1400 aa12.31□□□□□ -0.44
CLN8-201ENST00000331222 CBFA2T2O43439 604 aa12.31□□□□□ -0.44
CLN8-201ENST00000331222 PPP1R12BO60237 982 aaPredicted RBP12.31□□□□□ -0.44
CLN8-201ENST00000331222 THEMISQ8N1K5 641 aaPredicted RBP12.31□□□□□ -0.44
CLN8-201ENST00000331222 SYCE3A1L190 88 aa12.31□□□□□ -0.44
CLN8-201ENST00000331222 PRKCSHP14314 528 aaPredicted RBP12.31□□□□□ -0.44
CLN8-201ENST00000331222 CASQ1P31415 396 aa12.31□□□□□ -0.44
CLN8-201ENST00000331222 ACSBG1Q96GR2 724 aa12.31□□□□□ -0.44
CLN8-201ENST00000331222 CEP63Q96MT8 703 aa12.31□□□□□ -0.44
CLN8-201ENST00000331222 MBD3O95983 291 aa12.31□□□□□ -0.44
CLN8-201ENST00000331222 NLRP5P59047 1200 aa12.3□□□□□ -0.44
CLN8-201ENST00000331222 IL27Q8NEV9 243 aa12.3□□□□□ -0.44
CLN8-201ENST00000331222 CFAP65Q6ZU64 1925 aaKnown RBP12.3□□□□□ -0.44
CLN8-201ENST00000331222 KIF20AO95235 890 aa12.3□□□□□ -0.44
CLN8-201ENST00000331222 SKAP1Q86WV1 359 aa12.3□□□□□ -0.44
CLN8-201ENST00000331222 RGS22Q8NE09 1264 aa12.3□□□□□ -0.44
CLN8-201ENST00000331222 PRDM10Q9NQV6 1147 aa12.3□□□□□ -0.44
CLN8-201ENST00000331222 TRMT112Q9UI30 125 aaKnown RBP12.3□□□□□ -0.44
CLN8-201ENST00000331222 IFIT1P09914 478 aaKnown RBP12.3□□□□□ -0.44
CLN8-201ENST00000331222 LMAN1P49257 510 aa12.3□□□□□ -0.44
CLN8-201ENST00000331222 TCERG1LQ5VWI1 586 aa12.3□□□□□ -0.44
CLN8-201ENST00000331222 SYCP3Q8IZU3 236 aa12.3□□□□□ -0.44
CLN8-201ENST00000331222 GCC1Q96CN9 775 aa12.3□□□□□ -0.44
CLN8-201ENST00000331222 WDR33Q9C0J8 1336 aaKnown RBP12.3□□□□□ -0.44
CLN8-201ENST00000331222 ARHGAP29Q52LW3 1261 aa12.3□□□□□ -0.44
CLN8-201ENST00000331222 PRPF40BQ6NWY9 871 aaKnown RBP12.3□□□□□ -0.44
CLN8-201ENST00000331222 CKAP2LQ8IYA6 745 aa12.3□□□□□ -0.44
CLN8-201ENST00000331222 TRMT1Q9NXH9 659 aaKnown RBP12.3□□□□□ -0.44
CLN8-201ENST00000331222 F6X3S4 739 aa12.3□□□□□ -0.44
CLN8-201ENST00000331222 TDRD12Q587J7 1177 aaKnown RBP12.3□□□□□ -0.44
CLN8-201ENST00000331222 BICD1Q96G01 975 aa12.3□□□□□ -0.44
CLN8-201ENST00000331222 TSG101Q99816 390 aa12.3□□□□□ -0.44
CLN8-201ENST00000331222 MCM2P49736 904 aa12.3□□□□□ -0.44
CLN8-201ENST00000331222 IFFO1Q0D2I5 559 aa12.3□□□□□ -0.44
CLN8-201ENST00000331222 SPA17Q15506 151 aa12.3□□□□□ -0.44
CLN8-201ENST00000331222 CCDC148Q8NFR7 591 aa12.3□□□□□ -0.44
CLN8-201ENST00000331222 GRIPAP1Q4V328 841 aa12.29□□□□□ -0.44
CLN8-201ENST00000331222 RBM26Q5T8P6 1007 aaKnown RBP12.29□□□□□ -0.44
CLN8-201ENST00000331222 NUP88Q99567 741 aaPredicted RBP12.29□□□□□ -0.44
CLN8-201ENST00000331222 RRBP1Q9P2E9 1410 aaKnown RBP12.29□□□□□ -0.44
CLN8-201ENST00000331222 BIN1O00499 593 aa12.29□□□□□ -0.44
CLN8-201ENST00000331222 HAND2P61296 217 aa12.29□□□□□ -0.44
CLN8-201ENST00000331222 FAM212AQ96EL1 285 aa12.29□□□□□ -0.44
CLN8-201ENST00000331222 HOMER2Q9NSB8 354 aa12.29□□□□□ -0.44
CLN8-201ENST00000331222 KIF21BO75037 1637 aa12.28□□□□□ -0.44
CLN8-201ENST00000331222 AKNAD1Q5T1N1 836 aa12.28□□□□□ -0.44
CLN8-201ENST00000331222 CEP131Q9UPN4 1083 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 174.6 ms