RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 MRPL50Q8N5N7 158 aaKnown RBP19.82■□□□□ 0.76
PDGFB-201ENST00000331163 USP16Q9Y5T5 823 aa19.82■□□□□ 0.76
PDGFB-201ENST00000331163 GPTP24298 496 aa19.81■□□□□ 0.76
PDGFB-201ENST00000331163 CDK12Q9NYV4 1490 aaPredicted RBP19.81■□□□□ 0.76
PDGFB-201ENST00000331163 A1BGP04217 495 aa19.81■□□□□ 0.76
PDGFB-201ENST00000331163 USP21Q9UK80 565 aa19.81■□□□□ 0.76
PDGFB-201ENST00000331163 EXOC6BQ9Y2D4 811 aa19.81■□□□□ 0.76
PDGFB-201ENST00000331163 PHKG2P15735 406 aa19.81■□□□□ 0.76
PDGFB-201ENST00000331163 USP31Q70CQ4 1352 aa19.8■□□□□ 0.76
PDGFB-201ENST00000331163 SMARCA5O60264 1052 aaPredicted RBP19.8■□□□□ 0.76
PDGFB-201ENST00000331163 GTF2E1P29083 439 aaPredicted RBP19.8■□□□□ 0.76
PDGFB-201ENST00000331163 NEXNQ0ZGT2 675 aa19.8■□□□□ 0.76
PDGFB-201ENST00000331163 PROSER3Q2NL68 480 aa19.8■□□□□ 0.76
PDGFB-201ENST00000331163 TNS3Q68CZ2 1445 aa19.8■□□□□ 0.76
PDGFB-201ENST00000331163 UBTFL1P0CB47 393 aaPredicted RBP19.8■□□□□ 0.76
PDGFB-201ENST00000331163 CWF19L2Q2TBE0 894 aaKnown RBP19.8■□□□□ 0.76
PDGFB-201ENST00000331163 LRRC7Q96NW7 1537 aa19.8■□□□□ 0.76
PDGFB-201ENST00000331163 ZNF790Q6PG37 636 aa19.79■□□□□ 0.76
PDGFB-201ENST00000331163 CENPQQ7L2Z9 268 aaPredicted RBP19.79■□□□□ 0.76
PDGFB-201ENST00000331163 COPS6Q7L5N1 327 aa19.79■□□□□ 0.76
PDGFB-201ENST00000331163 PHF23Q9BUL5 403 aaPredicted RBP19.79■□□□□ 0.76
PDGFB-201ENST00000331163 ASAP1Q9ULH1 1129 aa19.79■□□□□ 0.76
PDGFB-201ENST00000331163 PDZRN3Q9UPQ7 1066 aa19.79■□□□□ 0.76
PDGFB-201ENST00000331163 SPRYD3Q8NCJ5 442 aa19.78■□□□□ 0.76
PDGFB-201ENST00000331163 MYD88Q99836 296 aa19.78■□□□□ 0.76
PDGFB-201ENST00000331163 MAP3K2Q9Y2U5 619 aa19.78■□□□□ 0.76
PDGFB-201ENST00000331163 IL16Q14005 1332 aa19.78■□□□□ 0.76
PDGFB-201ENST00000331163 SMIM5Q71RC9 77 aa19.78■□□□□ 0.76
PDGFB-201ENST00000331163 TRMT2AQ8IZ69 625 aaKnown RBP19.78■□□□□ 0.76
PDGFB-201ENST00000331163 CERKQ8TCT0 537 aa19.78■□□□□ 0.76
PDGFB-201ENST00000331163 XAGE3Q8WTP9 111 aa19.78■□□□□ 0.76
PDGFB-201ENST00000331163 IL1RAPL2Q9NP60 686 aa19.78■□□□□ 0.76
PDGFB-201ENST00000331163 WDR17Q8IZU2 1322 aa19.77■□□□□ 0.76
PDGFB-201ENST00000331163 BACH2Q9BYV9 841 aa19.77■□□□□ 0.76
PDGFB-201ENST00000331163 FMNL2Q96PY5 1086 aa19.77■□□□□ 0.75
PDGFB-201ENST00000331163 HSP90AB1P08238 724 aaKnown RBP19.76■□□□□ 0.75
PDGFB-201ENST00000331163 TSHZ3Q63HK5 1081 aa19.76■□□□□ 0.75
PDGFB-201ENST00000331163 DCAF5Q96JK2 942 aa19.76■□□□□ 0.75
PDGFB-201ENST00000331163 SRCIN1Q9C0H9 1055 aa19.76■□□□□ 0.75
PDGFB-201ENST00000331163 DDX58O95786 925 aaKnown RBP19.76■□□□□ 0.75
PDGFB-201ENST00000331163 GSE1Q14687 1217 aa19.76■□□□□ 0.75
PDGFB-201ENST00000331163 TBC1D2BQ9UPU7 963 aa19.75■□□□□ 0.75
PDGFB-201ENST00000331163 SOS2Q07890 1332 aaPredicted RBP19.75■□□□□ 0.75
PDGFB-201ENST00000331163 SLC52A2Q9HAB3 445 aa19.75■□□□□ 0.75
PDGFB-201ENST00000331163 SURF6O75683 361 aaKnown RBP19.75■□□□□ 0.75
PDGFB-201ENST00000331163 MFAP1P55081 439 aaKnown RBP19.75■□□□□ 0.75
PDGFB-201ENST00000331163 NFKBIBQ15653 356 aa19.75■□□□□ 0.75
PDGFB-201ENST00000331163 LRRFIP2Q9Y608 721 aaKnown RBP19.75■□□□□ 0.75
PDGFB-201ENST00000331163 TRIM6-TRIM34B2RNG4 842 aa19.74■□□□□ 0.75
PDGFB-201ENST00000331163 EIF4A1P60842 406 aaKnown RBP19.74■□□□□ 0.75
PDGFB-201ENST00000331163 USP19O94966 1318 aa19.74■□□□□ 0.75
PDGFB-201ENST00000331163 ALDH1L2Q3SY69 923 aa19.74■□□□□ 0.75
PDGFB-201ENST00000331163 PHF14O94880 888 aa19.74■□□□□ 0.75
PDGFB-201ENST00000331163 DBF4Q9UBU7 674 aaPredicted RBP19.74■□□□□ 0.75
PDGFB-201ENST00000331163 TAF7LQ5H9L4 462 aa19.73■□□□□ 0.75
PDGFB-201ENST00000331163 DNAJC10Q8IXB1 793 aa19.72■□□□□ 0.75
PDGFB-201ENST00000331163 UPF2Q9HAU5 1272 aaKnown RBP19.72■□□□□ 0.75
PDGFB-201ENST00000331163 CHMP4BQ9H444 224 aaKnown RBP19.72■□□□□ 0.75
PDGFB-201ENST00000331163 SRGAP3O43295 1099 aa19.71■□□□□ 0.75
PDGFB-201ENST00000331163 MAP4K4O95819 1239 aaPredicted RBP19.71■□□□□ 0.75
PDGFB-201ENST00000331163 CT47B1P0C2W7 299 aaPredicted RBP19.71■□□□□ 0.75
PDGFB-201ENST00000331163 TAOK2Q9UL54 1235 aa19.71■□□□□ 0.75
PDGFB-201ENST00000331163 KCNQ2O43526 872 aa19.71■□□□□ 0.75
PDGFB-201ENST00000331163 SNRPA1P09661 255 aaKnown RBP19.71■□□□□ 0.75
PDGFB-201ENST00000331163 ITSN1Q15811 1721 aa19.71■□□□□ 0.75
PDGFB-201ENST00000331163 DNAAF4Q8WXU2 420 aa19.71■□□□□ 0.75
PDGFB-201ENST00000331163 RILPL2Q969X0 211 aa19.71■□□□□ 0.75
PDGFB-201ENST00000331163 PCDH11XQ9BZA7 1347 aa19.7■□□□□ 0.74
PDGFB-201ENST00000331163 PCDH11YQ9BZA8 1340 aa19.7■□□□□ 0.74
PDGFB-201ENST00000331163 CCDC24Q8N4L8 307 aa19.7■□□□□ 0.74
PDGFB-201ENST00000331163 SSH2Q76I76 1423 aa19.7■□□□□ 0.74
PDGFB-201ENST00000331163 CARD10Q9BWT7 1032 aa19.7■□□□□ 0.74
PDGFB-201ENST00000331163 HMMRO75330 724 aa19.7■□□□□ 0.74
PDGFB-201ENST00000331163 ATP6V1AP38606 617 aa19.7■□□□□ 0.74
PDGFB-201ENST00000331163 ZNF853P0CG23 659 aa19.69■□□□□ 0.74
PDGFB-201ENST00000331163 UBE3BQ7Z3V4 1068 aa19.69■□□□□ 0.74
PDGFB-201ENST00000331163 DDRGK1Q96HY6 314 aa19.69■□□□□ 0.74
PDGFB-201ENST00000331163 GNAI2P04899 355 aa19.68■□□□□ 0.74
PDGFB-201ENST00000331163 GIGYF1O75420 1035 aaPredicted RBP19.68■□□□□ 0.74
PDGFB-201ENST00000331163 WWC3Q9ULE0 1092 aa19.67■□□□□ 0.74
PDGFB-201ENST00000331163 NALCNQ8IZF0 1738 aa19.67■□□□□ 0.74
PDGFB-201ENST00000331163 C16orf71Q8IYS4 520 aaPredicted RBP19.67■□□□□ 0.74
PDGFB-201ENST00000331163 KLHDC4Q8TBB5 520 aa19.66■□□□□ 0.74
PDGFB-201ENST00000331163 HTATSF1O43719 755 aaKnown RBP19.66■□□□□ 0.74
PDGFB-201ENST00000331163 ANKRD13DQ6ZTN6 518 aa19.66■□□□□ 0.74
PDGFB-201ENST00000331163 FRAT2O75474 233 aaPredicted RBP19.66■□□□□ 0.74
PDGFB-201ENST00000331163 QTRT2Q9H974 415 aaKnown RBP19.66■□□□□ 0.74
PDGFB-201ENST00000331163 SETD1AO15047 1707 aaKnown RBP19.65■□□□□ 0.74
PDGFB-201ENST00000331163 A0A087WZG4 1122 aa19.65■□□□□ 0.74
PDGFB-201ENST00000331163 NBPF7P0C2Y1 421 aaPredicted RBP19.65■□□□□ 0.74
PDGFB-201ENST00000331163 COL3A1P02461 1466 aaPredicted RBP19.65■□□□□ 0.74
PDGFB-201ENST00000331163 CCT4P50991 539 aaKnown RBP19.65■□□□□ 0.74
PDGFB-201ENST00000331163 FAM161AQ3B820 660 aa19.65■□□□□ 0.74
PDGFB-201ENST00000331163 RNF123Q5XPI4 1314 aa19.65■□□□□ 0.74
PDGFB-201ENST00000331163 PIGBQ92521 554 aa19.65■□□□□ 0.74
PDGFB-201ENST00000331163 STARD3NLO95772 234 aa19.64■□□□□ 0.74
PDGFB-201ENST00000331163 TTLL7Q6ZT98 887 aa19.64■□□□□ 0.74
PDGFB-201ENST00000331163 PA2G4Q9UQ80 394 aaKnown RBP19.64■□□□□ 0.74
PDGFB-201ENST00000331163 NUTM1Q86Y26 1132 aa19.64■□□□□ 0.73
PDGFB-201ENST00000331163 NEUROD6Q96NK8 337 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms