RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 PRR36Q9H6K5 1346 aa9.06□□□□□ -0.96
TRIM49-201ENST00000329758 PPIP5K1Q6PFW1 1433 aa9.06□□□□□ -0.96
TRIM49-201ENST00000329758 MYCNP04198 464 aaPredicted RBP9.06□□□□□ -0.96
TRIM49-201ENST00000329758 NCBP1Q09161 790 aaKnown RBP9.06□□□□□ -0.96
TRIM49-201ENST00000329758 CEP120Q8N960 986 aa9.06□□□□□ -0.96
TRIM49-201ENST00000329758 TRIM35Q9UPQ4 493 aa9.06□□□□□ -0.96
TRIM49-201ENST00000329758 ROBO2Q9HCK4 1378 aa9.06□□□□□ -0.96
TRIM49-201ENST00000329758 ITSN1Q15811 1721 aa9.06□□□□□ -0.96
TRIM49-201ENST00000329758 RAD50Q92878 1312 aa9.05□□□□□ -0.96
TRIM49-201ENST00000329758 MON2Q7Z3U7 1717 aa9.05□□□□□ -0.96
TRIM49-201ENST00000329758 DIAPH1O60610 1272 aaKnown RBP9.05□□□□□ -0.96
TRIM49-201ENST00000329758 MBD3O95983 291 aa9.05□□□□□ -0.96
TRIM49-201ENST00000329758 CYP2E1P05181 493 aaPredicted RBP9.05□□□□□ -0.96
TRIM49-201ENST00000329758 TMPOP42166 694 aaKnown RBP9.05□□□□□ -0.96
TRIM49-201ENST00000329758 MCTP1Q6DN14 999 aa9.05□□□□□ -0.96
TRIM49-201ENST00000329758 FAM184AQ8NB25 1140 aa9.05□□□□□ -0.96
TRIM49-201ENST00000329758 RBM33Q96EV2 1170 aaKnown RBP9.05□□□□□ -0.96
TRIM49-201ENST00000329758 PHACTR3Q96KR7 559 aa9.05□□□□□ -0.96
TRIM49-201ENST00000329758 PHF23Q9BUL5 403 aaPredicted RBP9.05□□□□□ -0.96
TRIM49-201ENST00000329758 DNAJC5Q9H3Z4 198 aa9.05□□□□□ -0.96
TRIM49-201ENST00000329758 MED14O60244 1454 aa9.05□□□□□ -0.96
TRIM49-201ENST00000329758 COL3A1P02461 1466 aaPredicted RBP9.05□□□□□ -0.96
TRIM49-201ENST00000329758 ZNF142P52746 1687 aaPredicted RBP9.05□□□□□ -0.96
TRIM49-201ENST00000329758 AKAP12Q02952 1782 aa9.05□□□□□ -0.96
TRIM49-201ENST00000329758 TPM3P06753 285 aa9.05□□□□□ -0.96
TRIM49-201ENST00000329758 TNNT3P45378 269 aaPredicted RBP9.05□□□□□ -0.96
TRIM49-201ENST00000329758 EXOSC9Q06265 439 aaKnown RBP9.05□□□□□ -0.96
TRIM49-201ENST00000329758 NSD2O96028 1365 aa9.05□□□□□ -0.96
TRIM49-201ENST00000329758 PLEKHG1Q9ULL1 1385 aa9.05□□□□□ -0.96
TRIM49-201ENST00000329758 PTPRUQ92729 1446 aa9.04□□□□□ -0.96
TRIM49-201ENST00000329758 RGPD8O14715 1765 aaPredicted RBP9.04□□□□□ -0.96
TRIM49-201ENST00000329758 TOPAZ1Q8N9V7 1692 aa9.04□□□□□ -0.96
TRIM49-201ENST00000329758 PRKAR2BP31323 418 aa9.04□□□□□ -0.96
TRIM49-201ENST00000329758 NOP2P46087 812 aaKnown RBP9.04□□□□□ -0.96
TRIM49-201ENST00000329758 KIF18AQ8NI77 898 aa9.04□□□□□ -0.96
TRIM49-201ENST00000329758 NCAPGQ9BPX3 1015 aa9.04□□□□□ -0.96
TRIM49-201ENST00000329758 TSPY26PQ9H489 355 aa9.04□□□□□ -0.96
TRIM49-201ENST00000329758 FAM53CQ9NYF3 392 aa9.04□□□□□ -0.96
TRIM49-201ENST00000329758 KIF16BQ96L93 1317 aa9.04□□□□□ -0.96
TRIM49-201ENST00000329758 ADGRB2O60241 1585 aa9.04□□□□□ -0.96
TRIM49-201ENST00000329758 FAM177BA6PVY3 158 aa9.03□□□□□ -0.96
TRIM49-201ENST00000329758 RAD51AP2Q09MP3 1159 aa9.03□□□□□ -0.96
TRIM49-201ENST00000329758 RASSF4Q9H2L5 321 aa9.03□□□□□ -0.96
TRIM49-201ENST00000329758 ATP7BP35670 1465 aa9.03□□□□□ -0.96
TRIM49-201ENST00000329758 REC8O95072 547 aa9.03□□□□□ -0.96
TRIM49-201ENST00000329758 GTF2A1P52655 376 aaPredicted RBP9.03□□□□□ -0.96
TRIM49-201ENST00000329758 GRIPAP1Q4V328 841 aa9.03□□□□□ -0.96
TRIM49-201ENST00000329758 FAM135BQ49AJ0 1406 aa9.03□□□□□ -0.96
TRIM49-201ENST00000329758 XRN1Q8IZH2 1706 aaKnown RBP9.03□□□□□ -0.96
TRIM49-201ENST00000329758 CYP2C19P33261 490 aa9.02□□□□□ -0.97
TRIM49-201ENST00000329758 BRPF1P55201 1214 aaPredicted RBP9.02□□□□□ -0.97
TRIM49-201ENST00000329758 LMOD3Q0VAK6 560 aa9.02□□□□□ -0.97
TRIM49-201ENST00000329758 MUM1L1Q5H9M0 696 aa9.02□□□□□ -0.97
TRIM49-201ENST00000329758 WDR63Q8IWG1 891 aa9.02□□□□□ -0.97
TRIM49-201ENST00000329758 GPT2Q8TD30 523 aa9.02□□□□□ -0.97
TRIM49-201ENST00000329758 SYAP1Q96A49 352 aaPredicted RBP9.02□□□□□ -0.97
TRIM49-201ENST00000329758 PCDHB15Q9Y5E8 787 aa9.02□□□□□ -0.97
TRIM49-201ENST00000329758 MAP2P11137 1827 aaKnown RBP9.02□□□□□ -0.97
TRIM49-201ENST00000329758 CDC42BPGQ6DT37 1551 aa9.02□□□□□ -0.97
TRIM49-201ENST00000329758 SYCE3A1L190 88 aa9.02□□□□□ -0.97
TRIM49-201ENST00000329758 SMTNL1A8MU46 457 aa9.02□□□□□ -0.97
TRIM49-201ENST00000329758 ELL2O00472 640 aaPredicted RBP9.02□□□□□ -0.97
TRIM49-201ENST00000329758 PHF14O94880 888 aa9.02□□□□□ -0.97
TRIM49-201ENST00000329758 DCTN1Q14203 1278 aa9.02□□□□□ -0.97
TRIM49-201ENST00000329758 ICE2Q659A1 982 aa9.02□□□□□ -0.97
TRIM49-201ENST00000329758 GAS2L2Q8NHY3 880 aa9.02□□□□□ -0.97
TRIM49-201ENST00000329758 CARD10Q9BWT7 1032 aa9.02□□□□□ -0.97
TRIM49-201ENST00000329758 SMC4Q9NTJ3 1288 aa9.02□□□□□ -0.97
TRIM49-201ENST00000329758 TMEM63CQ9P1W3 806 aa9.02□□□□□ -0.97
TRIM49-201ENST00000329758 NRKQ7Z2Y5 1582 aa9.01□□□□□ -0.97
TRIM49-201ENST00000329758 FAM83GA6ND36 823 aa9.01□□□□□ -0.97
TRIM49-201ENST00000329758 ERICH4A6NGS2 130 aa9.01□□□□□ -0.97
TRIM49-201ENST00000329758 DHX16O60231 1041 aaKnown RBP9.01□□□□□ -0.97
TRIM49-201ENST00000329758 ZNF397Q8NF99 534 aaPredicted RBP9.01□□□□□ -0.97
TRIM49-201ENST00000329758 SIRT1Q96EB6 747 aa9.01□□□□□ -0.97
TRIM49-201ENST00000329758 RSPH14Q9UHP6 348 aa9.01□□□□□ -0.97
TRIM49-201ENST00000329758 GOLGA6L6A8MZA4 724 aa9□□□□□ -0.97
TRIM49-201ENST00000329758 HDGFP51858 240 aaKnown RBP9□□□□□ -0.97
TRIM49-201ENST00000329758 KIAA1524Q8TCG1 905 aa9□□□□□ -0.97
TRIM49-201ENST00000329758 SSH1Q8WYL5 1049 aa9□□□□□ -0.97
TRIM49-201ENST00000329758 KIF2CQ99661 725 aa9□□□□□ -0.97
TRIM49-201ENST00000329758 CWC22Q9HCG8 908 aaKnown RBP9□□□□□ -0.97
TRIM49-201ENST00000329758 RBM27Q9P2N5 1060 aaKnown RBP9□□□□□ -0.97
TRIM49-201ENST00000329758 CCDC61Q9Y6R9 512 aa9□□□□□ -0.97
TRIM49-201ENST00000329758 DIP2AQ14689 1571 aa9□□□□□ -0.97
TRIM49-201ENST00000329758 HAP1P54257 671 aaPredicted RBP9□□□□□ -0.97
TRIM49-201ENST00000329758 CCDC27Q2M243 656 aa9□□□□□ -0.97
TRIM49-201ENST00000329758 NUTM2GQ5VZR2 741 aa9□□□□□ -0.97
TRIM49-201ENST00000329758 CEP83Q9Y592 693 aa9□□□□□ -0.97
TRIM49-201ENST00000329758 CPSF1Q10570 1443 aaKnown RBP9□□□□□ -0.97
TRIM49-201ENST00000329758 LRRC7Q96NW7 1537 aa8.99□□□□□ -0.97
TRIM49-201ENST00000329758 LOC102724159A0A0B4J2E5 919 aa8.99□□□□□ -0.97
TRIM49-201ENST00000329758 GUCY2CP25092 1073 aa8.99□□□□□ -0.97
TRIM49-201ENST00000329758 HNRNPH2P55795 449 aaKnown RBP8.99□□□□□ -0.97
TRIM49-201ENST00000329758 PWP2Q15269 919 aaKnown RBP8.99□□□□□ -0.97
TRIM49-201ENST00000329758 SLFNL1Q499Z3 407 aa8.99□□□□□ -0.97
TRIM49-201ENST00000329758 CHMP4CQ96CF2 233 aa8.99□□□□□ -0.97
TRIM49-201ENST00000329758 COG3Q96JB2 828 aa8.99□□□□□ -0.97
TRIM49-201ENST00000329758 AMOTL2Q9Y2J4 779 aa8.99□□□□□ -0.97
TRIM49-201ENST00000329758 SETD1BQ9UPS6 1966 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms