RNA–Protein interactions for RNA: ENST00000328024.10

RAB11B-201, Transcript of RAB11B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11B, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-201ENST00000328024 CCER2I3L3R5 266 aa26.63■■□□□ 1.85
RAB11B-201ENST00000328024 ATG3Q9NT62 314 aa26.63■■□□□ 1.85
RAB11B-201ENST00000328024 RGPD3A6NKT7 1758 aaPredicted RBP26.63■■□□□ 1.85
RAB11B-201ENST00000328024 RGPD4Q7Z3J3 1758 aa26.63■■□□□ 1.85
RAB11B-201ENST00000328024 TXNRD1Q16881 649 aa26.62■■□□□ 1.85
RAB11B-201ENST00000328024 FAM9BQ8IZU0 186 aa26.62■■□□□ 1.85
RAB11B-201ENST00000328024 HTATSF1O43719 755 aaKnown RBP26.61■■□□□ 1.85
RAB11B-201ENST00000328024 RIPK4P57078 832 aa26.61■■□□□ 1.85
RAB11B-201ENST00000328024 APAF1O14727 1248 aa26.61■■□□□ 1.85
RAB11B-201ENST00000328024 KCNQ4P56696 695 aa26.61■■□□□ 1.85
RAB11B-201ENST00000328024 NEUROD2Q15784 382 aa26.61■■□□□ 1.85
RAB11B-201ENST00000328024 RREB1Q92766 1687 aa26.61■■□□□ 1.85
RAB11B-201ENST00000328024 RTF1Q92541 710 aaKnown RBP26.6■■□□□ 1.85
RAB11B-201ENST00000328024 THUMPD2Q9BTF0 503 aaKnown RBP26.6■■□□□ 1.85
RAB11B-201ENST00000328024 LRRC4BQ9NT99 713 aa26.6■■□□□ 1.85
RAB11B-201ENST00000328024 PALLDQ8WX93 1383 aa26.6■■□□□ 1.85
RAB11B-201ENST00000328024 LY75O60449 1722 aa26.59■■□□□ 1.85
RAB11B-201ENST00000328024 SENP3-EIF4A1A0A087X0R7 540 aa26.59■■□□□ 1.85
RAB11B-201ENST00000328024 SIPA1L3O60292 1781 aaPredicted RBP26.57■■□□□ 1.84
RAB11B-201ENST00000328024 TRIM35Q9UPQ4 493 aa26.57■■□□□ 1.84
RAB11B-201ENST00000328024 NUP188Q5SRE5 1749 aa26.57■■□□□ 1.84
RAB11B-201ENST00000328024 TEFQ10587 303 aa26.56■■□□□ 1.84
RAB11B-201ENST00000328024 SLC39A6Q13433 755 aa26.56■■□□□ 1.84
RAB11B-201ENST00000328024 SMARCC1Q92922 1105 aaPredicted RBP26.56■■□□□ 1.84
RAB11B-201ENST00000328024 SLC4A9Q96Q91 983 aa26.54■■□□□ 1.84
RAB11B-201ENST00000328024 CCNL1Q9UK58 526 aaPredicted RBP26.53■■□□□ 1.84
RAB11B-201ENST00000328024 PAPPAQ13219 1627 aa26.52■■□□□ 1.84
RAB11B-201ENST00000328024 LOC102724428A0A0B4J2F2 783 aa26.52■■□□□ 1.84
RAB11B-201ENST00000328024 SIK1P57059 783 aa26.52■■□□□ 1.84
RAB11B-201ENST00000328024 SLC27A3Q5K4L6 730 aa26.52■■□□□ 1.84
RAB11B-201ENST00000328024 KCNQ3O43525 872 aa26.51■■□□□ 1.83
RAB11B-201ENST00000328024 ANO8Q9HCE9 1232 aaPredicted RBP26.51■■□□□ 1.83
RAB11B-201ENST00000328024 PTCD1O75127 700 aaKnown RBP26.5■■□□□ 1.83
RAB11B-201ENST00000328024 MIS18AQ9NYP9 233 aa26.5■■□□□ 1.83
RAB11B-201ENST00000328024 RBM42Q9BTD8 480 aaKnown RBP26.49■■□□□ 1.83
RAB11B-201ENST00000328024 BTBD11A6QL63 1104 aa26.48■■□□□ 1.83
RAB11B-201ENST00000328024 ITPK1Q13572 414 aa26.48■■□□□ 1.83
RAB11B-201ENST00000328024 TAF7Q15545 349 aaPredicted RBP26.48■■□□□ 1.83
RAB11B-201ENST00000328024 KCPQ6ZWJ8 1503 aa26.48■■□□□ 1.83
RAB11B-201ENST00000328024 LMOD3Q0VAK6 560 aa26.48■■□□□ 1.83
RAB11B-201ENST00000328024 ZNF790Q6PG37 636 aa26.48■■□□□ 1.83
RAB11B-201ENST00000328024 ATP6V1AP38606 617 aa26.46■■□□□ 1.83
RAB11B-201ENST00000328024 UBR2Q8IWV8 1755 aa26.45■■□□□ 1.82
RAB11B-201ENST00000328024 TAF1LQ8IZX4 1826 aa26.44■■□□□ 1.82
RAB11B-201ENST00000328024 ZNF827Q17R98 1081 aa26.44■■□□□ 1.82
RAB11B-201ENST00000328024 ZNF496Q96IT1 587 aaPredicted RBP26.44■■□□□ 1.82
RAB11B-201ENST00000328024 LINC00116Q8NCU8 138 aa26.43■■□□□ 1.82
RAB11B-201ENST00000328024 SALL2Q9Y467 1007 aaPredicted RBP26.43■■□□□ 1.82
RAB11B-201ENST00000328024 AKT1S1Q96B36 256 aa26.43■■□□□ 1.82
RAB11B-201ENST00000328024 C5P01031 1676 aa26.42■■□□□ 1.82
RAB11B-201ENST00000328024 NBPF14Q5TI25 921 aa26.42■■□□□ 1.82
RAB11B-201ENST00000328024 TTC5Q8N0Z6 440 aa26.42■■□□□ 1.82
RAB11B-201ENST00000328024 ZNF831Q5JPB2 1677 aa26.41■■□□□ 1.82
RAB11B-201ENST00000328024 PSDA5PKW4 1024 aaPredicted RBP26.41■■□□□ 1.82
RAB11B-201ENST00000328024 R3HDM1Q15032 1099 aaKnown RBP26.41■■□□□ 1.82
RAB11B-201ENST00000328024 SLC15A2Q16348 729 aa26.41■■□□□ 1.82
RAB11B-201ENST00000328024 TJP1Q07157 1748 aa26.4■■□□□ 1.82
RAB11B-201ENST00000328024 CCDC27Q2M243 656 aa26.4■■□□□ 1.82
RAB11B-201ENST00000328024 WWC1Q8IX03 1113 aa26.4■■□□□ 1.82
RAB11B-201ENST00000328024 KDM3BQ7LBC6 1761 aa26.39■■□□□ 1.82
RAB11B-201ENST00000328024 DNAJC10Q8IXB1 793 aa26.39■■□□□ 1.82
RAB11B-201ENST00000328024 STK32BQ9NY57 414 aa26.38■■□□□ 1.81
RAB11B-201ENST00000328024 C4BP0C0L5 1744 aa26.38■■□□□ 1.81
RAB11B-201ENST00000328024 NCBP3Q53F19 620 aaKnown RBP26.38■■□□□ 1.81
RAB11B-201ENST00000328024 HEG1Q9ULI3 1381 aa26.38■■□□□ 1.81
RAB11B-201ENST00000328024 CHL1O00533 1208 aa26.37■■□□□ 1.81
RAB11B-201ENST00000328024 AMIGO3Q86WK7 504 aa26.37■■□□□ 1.81
RAB11B-201ENST00000328024 PRAMEF22A3QJZ6 481 aa26.36■■□□□ 1.81
RAB11B-201ENST00000328024 VSIG10Q8N0Z9 540 aa26.36■■□□□ 1.81
RAB11B-201ENST00000328024 FMNL2Q96PY5 1086 aa26.36■■□□□ 1.81
RAB11B-201ENST00000328024 TSPYL4Q9UJ04 414 aa26.36■■□□□ 1.81
RAB11B-201ENST00000328024 LAS1LQ9Y4W2 734 aaKnown RBP26.36■■□□□ 1.81
RAB11B-201ENST00000328024 COL5A3P25940 1745 aaPredicted RBP26.36■■□□□ 1.81
RAB11B-201ENST00000328024 CICQ96RK0 1608 aaPredicted RBP26.36■■□□□ 1.81
RAB11B-201ENST00000328024 SMIM5Q71RC9 77 aa26.35■■□□□ 1.81
RAB11B-201ENST00000328024 PDGFDQ9GZP0 370 aaPredicted RBP26.35■■□□□ 1.81
RAB11B-201ENST00000328024 ZNF853P0CG23 659 aa26.35■■□□□ 1.81
RAB11B-201ENST00000328024 EIF4A1P60842 406 aaKnown RBP26.35■■□□□ 1.81
RAB11B-201ENST00000328024 YTHDC1Q96MU7 727 aaKnown RBP26.34■■□□□ 1.81
RAB11B-201ENST00000328024 BABAM1Q9NWV8 329 aa26.34■■□□□ 1.81
RAB11B-201ENST00000328024 CYP19A1P11511 503 aaPredicted RBP26.33■■□□□ 1.81
RAB11B-201ENST00000328024 CFAP44Q96MT7 982 aa26.33■■□□□ 1.81
RAB11B-201ENST00000328024 TUBGCP6Q96RT7 1819 aa26.33■■□□□ 1.81
RAB11B-201ENST00000328024 MYH14Q7Z406 1995 aaKnown RBP26.33■■□□□ 1.8
RAB11B-201ENST00000328024 CRKLP46109 303 aaKnown RBP26.31■■□□□ 1.8
RAB11B-201ENST00000328024 INTS5Q6P9B9 1019 aaKnown RBP26.31■■□□□ 1.8
RAB11B-201ENST00000328024 MBIPQ9NS73 344 aa26.31■■□□□ 1.8
RAB11B-201ENST00000328024 TFCP2L1Q9NZI6 479 aa26.31■■□□□ 1.8
RAB11B-201ENST00000328024 USP16Q9Y5T5 823 aa26.31■■□□□ 1.8
RAB11B-201ENST00000328024 PNPLA7Q6ZV29 1317 aa26.31■■□□□ 1.8
RAB11B-201ENST00000328024 CNTNAP4Q9C0A0 1308 aa26.31■■□□□ 1.8
RAB11B-201ENST00000328024 IFT57Q9NWB7 429 aa26.3■■□□□ 1.8
RAB11B-201ENST00000328024 RC3H1Q5TC82 1133 aaKnown RBP26.3■■□□□ 1.8
RAB11B-201ENST00000328024 AK7Q96M32 723 aa26.3■■□□□ 1.8
RAB11B-201ENST00000328024 SNRPA1P09661 255 aaKnown RBP26.29■■□□□ 1.8
RAB11B-201ENST00000328024 KRT24Q2M2I5 525 aa26.29■■□□□ 1.8
RAB11B-201ENST00000328024 ZNF521Q96K83 1311 aa26.29■■□□□ 1.8
RAB11B-201ENST00000328024 GNPATO15228 680 aa26.28■■□□□ 1.8
RAB11B-201ENST00000328024 GIGYF1O75420 1035 aaPredicted RBP26.28■■□□□ 1.8
RAB11B-201ENST00000328024 CALD1Q05682 793 aaKnown RBP26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms