RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 PANK2Q9BZ23 570 aa24.48■■□□□ 1.51
SOX2-201ENST00000325404 CWC22Q9HCG8 908 aaKnown RBP24.48■■□□□ 1.51
SOX2-201ENST00000325404 RTF1Q92541 710 aaKnown RBP24.47■■□□□ 1.51
SOX2-201ENST00000325404 IGSF1Q8N6C5 1336 aa24.45■■□□□ 1.5
SOX2-201ENST00000325404 MTHFSDQ2M296 383 aaKnown RBP24.45■■□□□ 1.5
SOX2-201ENST00000325404 TMEM94Q12767 1356 aa24.45■■□□□ 1.5
SOX2-201ENST00000325404 KDM4FA0A1W2PPD8 638 aa24.44■■□□□ 1.5
SOX2-201ENST00000325404 OTUD7AQ8TE49 926 aaPredicted RBP24.44■■□□□ 1.5
SOX2-201ENST00000325404 TSPYL4Q9UJ04 414 aa24.44■■□□□ 1.5
SOX2-201ENST00000325404 C1orf167Q5SNV9 1468 aa24.44■■□□□ 1.5
SOX2-201ENST00000325404 FOXO3O43524 673 aa24.44■■□□□ 1.5
SOX2-201ENST00000325404 SSFA2P28290 1259 aa24.44■■□□□ 1.5
SOX2-201ENST00000325404 HOXC9P31274 260 aa24.44■■□□□ 1.5
SOX2-201ENST00000325404 CYP2E1P05181 493 aaPredicted RBP24.43■■□□□ 1.5
SOX2-201ENST00000325404 CLCN1P35523 988 aa24.43■■□□□ 1.5
SOX2-201ENST00000325404 KLHL40Q2TBA0 621 aa24.43■■□□□ 1.5
SOX2-201ENST00000325404 ST18O60284 1047 aa24.43■■□□□ 1.5
SOX2-201ENST00000325404 BAG4O95429 457 aaKnown RBP24.43■■□□□ 1.5
SOX2-201ENST00000325404 LRRC37A3O60309 1634 aa24.43■■□□□ 1.5
SOX2-201ENST00000325404 BABAM1Q9NWV8 329 aa24.42■■□□□ 1.5
SOX2-201ENST00000325404 ERC2O15083 957 aa24.42■■□□□ 1.5
SOX2-201ENST00000325404 ATF3P18847 181 aa24.41■■□□□ 1.5
SOX2-201ENST00000325404 GNAI2P04899 355 aa24.41■■□□□ 1.5
SOX2-201ENST00000325404 FOXD4L1Q9NU39 408 aa24.41■■□□□ 1.5
SOX2-201ENST00000325404 EYA1Q99502 592 aa24.4■■□□□ 1.5
SOX2-201ENST00000325404 DCCP43146 1447 aa24.4■■□□□ 1.5
SOX2-201ENST00000325404 SMARCA5O60264 1052 aaPredicted RBP24.4■■□□□ 1.5
SOX2-201ENST00000325404 KCNH5Q8NCM2 988 aa24.4■■□□□ 1.5
SOX2-201ENST00000325404 STRCP1A6NGW2 1772 aa24.4■■□□□ 1.5
SOX2-201ENST00000325404 KIF1AQ12756 1690 aa24.4■■□□□ 1.5
SOX2-201ENST00000325404 PDE1AP54750 535 aa24.39■■□□□ 1.5
SOX2-201ENST00000325404 STK31Q9BXU1 1019 aa24.39■■□□□ 1.5
SOX2-201ENST00000325404 ARXQ96QS3 562 aa24.39■■□□□ 1.49
SOX2-201ENST00000325404 GNAI3P08754 354 aa24.38■■□□□ 1.49
SOX2-201ENST00000325404 XPCQ01831 940 aaPredicted RBP24.38■■□□□ 1.49
SOX2-201ENST00000325404 G2E3Q7L622 706 aa24.38■■□□□ 1.49
SOX2-201ENST00000325404 LMTK3Q96Q04 1460 aa24.38■■□□□ 1.49
SOX2-201ENST00000325404 NFAT5O94916 1531 aa24.38■■□□□ 1.49
SOX2-201ENST00000325404 GAS2L3Q86XJ1 694 aa24.38■■□□□ 1.49
SOX2-201ENST00000325404 SALL3Q9BXA9 1300 aa24.38■■□□□ 1.49
SOX2-201ENST00000325404 CCDC30Q5VVM6 783 aa24.37■■□□□ 1.49
SOX2-201ENST00000325404 MST1RQ04912 1400 aa24.37■■□□□ 1.49
SOX2-201ENST00000325404 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.36■■□□□ 1.49
SOX2-201ENST00000325404 KRT28Q7Z3Y7 464 aa24.36■■□□□ 1.49
SOX2-201ENST00000325404 CACNA1FO60840 1977 aa24.36■■□□□ 1.49
SOX2-201ENST00000325404 PXDNLA1KZ92 1463 aa24.36■■□□□ 1.49
SOX2-201ENST00000325404 MIS18AQ9NYP9 233 aa24.35■■□□□ 1.49
SOX2-201ENST00000325404 N4BP2Q86UW6 1770 aaPredicted RBP24.35■■□□□ 1.49
SOX2-201ENST00000325404 MCM2P49736 904 aa24.34■■□□□ 1.49
SOX2-201ENST00000325404 IP6K1Q92551 441 aa24.34■■□□□ 1.49
SOX2-201ENST00000325404 ATP8B2P98198 1209 aa24.34■■□□□ 1.49
SOX2-201ENST00000325404 SLC4A10Q6U841 1118 aa24.34■■□□□ 1.49
SOX2-201ENST00000325404 IL17RAQ96F46 866 aa24.34■■□□□ 1.49
SOX2-201ENST00000325404 DDX49Q9Y6V7 483 aaKnown RBP24.34■■□□□ 1.49
SOX2-201ENST00000325404 FAM208AQ9UK61 1670 aaKnown RBP24.34■■□□□ 1.49
SOX2-201ENST00000325404 LTN1O94822 1766 aa24.33■■□□□ 1.49
SOX2-201ENST00000325404 CADPS2Q86UW7 1296 aa24.33■■□□□ 1.49
SOX2-201ENST00000325404 GNAT3A8MTJ3 354 aa24.33■■□□□ 1.49
SOX2-201ENST00000325404 F6X3S4 739 aa24.33■■□□□ 1.49
SOX2-201ENST00000325404 FLIIQ13045 1269 aa24.33■■□□□ 1.49
SOX2-201ENST00000325404 LMOD2Q6P5Q4 547 aa24.33■■□□□ 1.49
SOX2-201ENST00000325404 LTV1Q96GA3 475 aaPredicted RBP24.33■■□□□ 1.49
SOX2-201ENST00000325404 SRCIN1Q9C0H9 1055 aa24.33■■□□□ 1.49
SOX2-201ENST00000325404 EPB41L2O43491 1005 aaKnown RBP24.32■■□□□ 1.48
SOX2-201ENST00000325404 ZNF445P59923 1031 aa24.32■■□□□ 1.48
SOX2-201ENST00000325404 LRRCC1Q9C099 1032 aa24.32■■□□□ 1.48
SOX2-201ENST00000325404 STAP2Q9UGK3 403 aa24.32■■□□□ 1.48
SOX2-201ENST00000325404 TRPM3Q9HCF6 1732 aaPredicted RBP24.32■■□□□ 1.48
SOX2-201ENST00000325404 TUBGCP6Q96RT7 1819 aa24.32■■□□□ 1.48
SOX2-201ENST00000325404 AOX1Q06278 1338 aa24.31■■□□□ 1.48
SOX2-201ENST00000325404 APBB1O00213 710 aa24.31■■□□□ 1.48
SOX2-201ENST00000325404 ANAPC15P60006 121 aa24.31■■□□□ 1.48
SOX2-201ENST00000325404 SLIT3O75094 1523 aa24.3■■□□□ 1.48
SOX2-201ENST00000325404 GCP02774 474 aa24.3■■□□□ 1.48
SOX2-201ENST00000325404 LMBRD1Q9NUN5 540 aa24.3■■□□□ 1.48
SOX2-201ENST00000325404 PPP1R9BQ96SB3 815 aa24.3■■□□□ 1.48
SOX2-201ENST00000325404 ESPNB1AK53 854 aa24.29■■□□□ 1.48
SOX2-201ENST00000325404 CCDC173Q0VFZ6 552 aa24.29■■□□□ 1.48
SOX2-201ENST00000325404 ESYT1Q9BSJ8 1104 aa24.29■■□□□ 1.48
SOX2-201ENST00000325404 ZBTB7CA1YPR0 619 aa24.28■■□□□ 1.48
SOX2-201ENST00000325404 MAP3K5Q99683 1374 aa24.28■■□□□ 1.48
SOX2-201ENST00000325404 STRCQ7RTU9 1775 aa24.28■■□□□ 1.48
SOX2-201ENST00000325404 MX1P20591 662 aa24.28■■□□□ 1.48
SOX2-201ENST00000325404 PHRF1Q9P1Y6 1649 aaKnown RBP24.27■■□□□ 1.48
SOX2-201ENST00000325404 MCCP23508 829 aa24.27■■□□□ 1.48
SOX2-201ENST00000325404 TRIM44Q96DX7 344 aaPredicted RBP24.27■■□□□ 1.48
SOX2-201ENST00000325404 FKBP5Q13451 457 aaPredicted RBP24.27■■□□□ 1.48
SOX2-201ENST00000325404 TAF7Q15545 349 aaPredicted RBP24.27■■□□□ 1.48
SOX2-201ENST00000325404 MCTP1Q6DN14 999 aa24.27■■□□□ 1.48
SOX2-201ENST00000325404 ARHGEF25Q86VW2 580 aa24.26■■□□□ 1.47
SOX2-201ENST00000325404 EXOC6BQ9Y2D4 811 aa24.26■■□□□ 1.47
SOX2-201ENST00000325404 PLEKHG5O94827 1062 aa24.25■■□□□ 1.47
SOX2-201ENST00000325404 NASPP49321 788 aaPredicted RBP24.24■■□□□ 1.47
SOX2-201ENST00000325404 CUL4AQ13619 759 aa24.24■■□□□ 1.47
SOX2-201ENST00000325404 CHMP4AQ9BY43 222 aa24.24■■□□□ 1.47
SOX2-201ENST00000325404 INTS4Q96HW7 963 aaKnown RBP24.24■■□□□ 1.47
SOX2-201ENST00000325404 ZDHHC9Q9Y397 364 aa24.24■■□□□ 1.47
SOX2-201ENST00000325404 NPHP3Q7Z494 1330 aa24.24■■□□□ 1.47
SOX2-201ENST00000325404 CHMLP26374 656 aa24.23■■□□□ 1.47
SOX2-201ENST00000325404 ZGPATQ8N5A5 531 aaKnown RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms