RNA–Protein interactions for RNA: ENST00000324309.8

CCDC149-201, Transcript of coiled-coil domain containing 149, humanhuman

TSL 2

Gene CCDC149, Length 5,604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-201ENST00000324309 SLC5A1P13866 664 aa15.41■□□□□ 0.06
CCDC149-201ENST00000324309 KIF1BPQ96EK5 621 aa15.41■□□□□ 0.06
CCDC149-201ENST00000324309 WDHD1O75717 1129 aaPredicted RBP15.41■□□□□ 0.06
CCDC149-201ENST00000324309 VPS53Q5VIR6 699 aa15.41■□□□□ 0.06
CCDC149-201ENST00000324309 TRMT112Q9UI30 125 aaKnown RBP15.41■□□□□ 0.06
CCDC149-201ENST00000324309 ZNF772Q68DY9 489 aaPredicted RBP15.4■□□□□ 0.06
CCDC149-201ENST00000324309 FANCIQ9NVI1 1328 aa15.4■□□□□ 0.06
CCDC149-201ENST00000324309 HOOK1Q9UJC3 728 aaKnown RBP15.4■□□□□ 0.06
CCDC149-201ENST00000324309 SRGAP3O43295 1099 aa15.4■□□□□ 0.06
CCDC149-201ENST00000324309 HOXB7P09629 217 aa15.4■□□□□ 0.06
CCDC149-201ENST00000324309 ALDH1L1O75891 902 aa15.39■□□□□ 0.05
CCDC149-201ENST00000324309 KIAA2012Q0VF49 1180 aa15.39■□□□□ 0.05
CCDC149-201ENST00000324309 MYD88Q99836 296 aa15.39■□□□□ 0.05
CCDC149-201ENST00000324309 BTG4Q9NY30 223 aa15.39■□□□□ 0.05
CCDC149-201ENST00000324309 MAP3K4Q9Y6R4 1608 aa15.39■□□□□ 0.05
CCDC149-201ENST00000324309 CLSTN1O94985 981 aa15.39■□□□□ 0.05
CCDC149-201ENST00000324309 HSP90AB2PQ58FF8 381 aa15.39■□□□□ 0.05
CCDC149-201ENST00000324309 DDX46Q7L014 1031 aaKnown RBP15.39■□□□□ 0.05
CCDC149-201ENST00000324309 PDIA4P13667 645 aaKnown RBP15.39■□□□□ 0.05
CCDC149-201ENST00000324309 LNPKQ9C0E8 428 aa15.39■□□□□ 0.05
CCDC149-201ENST00000324309 METTL24Q5JXM2 366 aa15.38■□□□□ 0.05
CCDC149-201ENST00000324309 CDCA7LQ96GN5 454 aa15.38■□□□□ 0.05
CCDC149-201ENST00000324309 ANKRD1Q15327 319 aa15.38■□□□□ 0.05
CCDC149-201ENST00000324309 ATP6V1AP38606 617 aa15.37■□□□□ 0.05
CCDC149-201ENST00000324309 CCDC152Q4G0S7 254 aa15.37■□□□□ 0.05
CCDC149-201ENST00000324309 DNAJC2Q99543 621 aaKnown RBP15.37■□□□□ 0.05
CCDC149-201ENST00000324309 TULP1O00294 542 aaPredicted RBP15.37■□□□□ 0.05
CCDC149-201ENST00000324309 BICDL1Q6ZP65 573 aa15.37■□□□□ 0.05
CCDC149-201ENST00000324309 STK32BQ9NY57 414 aa15.37■□□□□ 0.05
CCDC149-201ENST00000324309 DDX11L8A8MPP1 907 aa15.37■□□□□ 0.05
CCDC149-201ENST00000324309 MAP3K19Q56UN5 1328 aa15.36■□□□□ 0.05
CCDC149-201ENST00000324309 SPTY2D1Q68D10 685 aaPredicted RBP15.36■□□□□ 0.05
CCDC149-201ENST00000324309 RTCBQ9Y3I0 505 aaKnown RBP15.36■□□□□ 0.05
CCDC149-201ENST00000324309 FLIIQ13045 1269 aa15.36■□□□□ 0.05
CCDC149-201ENST00000324309 KRT32Q14532 448 aa15.36■□□□□ 0.05
CCDC149-201ENST00000324309 FLAD1Q8NFF5 587 aa15.36■□□□□ 0.05
CCDC149-201ENST00000324309 LDHCP07864 332 aa15.36■□□□□ 0.05
CCDC149-201ENST00000324309 USP21Q9UK80 565 aa15.36■□□□□ 0.05
CCDC149-201ENST00000324309 DIP2BQ9P265 1576 aa15.35■□□□□ 0.05
CCDC149-201ENST00000324309 PLA2R1Q13018 1463 aa15.35■□□□□ 0.05
CCDC149-201ENST00000324309 SETDB2Q96T68 719 aa15.35■□□□□ 0.05
CCDC149-201ENST00000324309 TRPC5Q9UL62 973 aaPredicted RBP15.35■□□□□ 0.05
CCDC149-201ENST00000324309 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.35■□□□□ 0.05
CCDC149-201ENST00000324309 TTF1Q15361 905 aaPredicted RBP15.35■□□□□ 0.05
CCDC149-201ENST00000324309 CDC42BPBQ9Y5S2 1711 aa15.35■□□□□ 0.05
CCDC149-201ENST00000324309 DIP2CQ9Y2E4 1556 aa15.35■□□□□ 0.05
CCDC149-201ENST00000324309 TPM2P07951 284 aa15.35■□□□□ 0.05
CCDC149-201ENST00000324309 PDE4AP27815 886 aa15.35■□□□□ 0.05
CCDC149-201ENST00000324309 AACSQ86V21 672 aa15.35■□□□□ 0.05
CCDC149-201ENST00000324309 INO80Q9ULG1 1556 aaPredicted RBP15.34■□□□□ 0.05
CCDC149-201ENST00000324309 AATKQ6ZMQ8 1374 aa15.34■□□□□ 0.05
CCDC149-201ENST00000324309 RARSP54136 660 aaKnown RBP15.34■□□□□ 0.05
CCDC149-201ENST00000324309 SKOR2Q2VWA4 1001 aaPredicted RBP15.34■□□□□ 0.05
CCDC149-201ENST00000324309 LAMC1P11047 1609 aa15.34■□□□□ 0.05
CCDC149-201ENST00000324309 GLRX3O76003 335 aaKnown RBP15.34■□□□□ 0.05
CCDC149-201ENST00000324309 ORAI2Q96SN7 254 aa15.34■□□□□ 0.05
CCDC149-201ENST00000324309 RAD21O60216 631 aa15.34■□□□□ 0.05
CCDC149-201ENST00000324309 PPP4R3BQ5MIZ7 849 aa15.33■□□□□ 0.05
CCDC149-201ENST00000324309 ZGPATQ8N5A5 531 aaKnown RBP15.33■□□□□ 0.04
CCDC149-201ENST00000324309 NBPF6Q5VWK0 638 aa15.33■□□□□ 0.04
CCDC149-201ENST00000324309 NBPF5PQ86XG9 351 aaPredicted RBP15.33■□□□□ 0.04
CCDC149-201ENST00000324309 NBPF4Q96M43 638 aa15.33■□□□□ 0.04
CCDC149-201ENST00000324309 RNMTO43148 476 aaKnown RBP15.33■□□□□ 0.04
CCDC149-201ENST00000324309 ANKRD13DQ6ZTN6 518 aa15.33■□□□□ 0.04
CCDC149-201ENST00000324309 CCAR1Q8IX12 1150 aaKnown RBP15.32■□□□□ 0.04
CCDC149-201ENST00000324309 PARP3Q9Y6F1 533 aa15.32■□□□□ 0.04
CCDC149-201ENST00000324309 UQCRFS1P1P0C7P4 283 aa15.32■□□□□ 0.04
CCDC149-201ENST00000324309 BAG6P46379 1132 aa15.32■□□□□ 0.04
CCDC149-201ENST00000324309 MBIPQ9NS73 344 aa15.32■□□□□ 0.04
CCDC149-201ENST00000324309 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.32■□□□□ 0.04
CCDC149-201ENST00000324309 ZMYM4Q5VZL5 1548 aa15.32■□□□□ 0.04
CCDC149-201ENST00000324309 ERVV-2B6SEH9 535 aa15.32■□□□□ 0.04
CCDC149-201ENST00000324309 GSTO1P78417 241 aa15.32■□□□□ 0.04
CCDC149-201ENST00000324309 EYA1Q99502 592 aa15.32■□□□□ 0.04
CCDC149-201ENST00000324309 ANKIB1Q9P2G1 1089 aa15.32■□□□□ 0.04
CCDC149-201ENST00000324309 PARP10Q53GL7 1025 aa15.32■□□□□ 0.04
CCDC149-201ENST00000324309 RNF17Q9BXT8 1623 aaKnown RBP15.32■□□□□ 0.04
CCDC149-201ENST00000324309 PDCP20941 246 aa15.32■□□□□ 0.04
CCDC149-201ENST00000324309 NUCB2P80303 420 aa15.32■□□□□ 0.04
CCDC149-201ENST00000324309 SPHKAPQ2M3C7 1700 aa15.31■□□□□ 0.04
CCDC149-201ENST00000324309 RAI14Q9P0K7 980 aa15.31■□□□□ 0.04
CCDC149-201ENST00000324309 LRP2BPQ9P2M1 347 aa15.31■□□□□ 0.04
CCDC149-201ENST00000324309 SMC3Q9UQE7 1217 aa15.31■□□□□ 0.04
CCDC149-201ENST00000324309 MAP3K12Q12852 859 aa15.31■□□□□ 0.04
CCDC149-201ENST00000324309 CAMSAP1Q5T5Y3 1602 aa15.31■□□□□ 0.04
CCDC149-201ENST00000324309 RBM5P52756 815 aaKnown RBP eCLIP15.31■□□□□ 0.04
CCDC149-201ENST00000324309 CCDC43Q96MW1 224 aaKnown RBP15.31■□□□□ 0.04
CCDC149-201ENST00000324309 BCAR3O75815 825 aa15.31■□□□□ 0.04
CCDC149-201ENST00000324309 TPTE2Q6XPS3 522 aa15.31■□□□□ 0.04
CCDC149-201ENST00000324309 IPO9Q96P70 1041 aaKnown RBP15.31■□□□□ 0.04
CCDC149-201ENST00000324309 METP08581 1390 aa15.31■□□□□ 0.04
CCDC149-201ENST00000324309 TPRNQ4KMQ1 711 aa15.3■□□□□ 0.04
CCDC149-201ENST00000324309 DCTN1Q14203 1278 aa15.3■□□□□ 0.04
CCDC149-201ENST00000324309 CHD1LQ86WJ1 897 aa15.3■□□□□ 0.04
CCDC149-201ENST00000324309 UTP14AQ9BVJ6 771 aaKnown RBP15.3■□□□□ 0.04
CCDC149-201ENST00000324309 RABEP1Q15276 862 aa15.3■□□□□ 0.04
CCDC149-201ENST00000324309 CABLES1Q8TDN4 633 aa15.3■□□□□ 0.04
CCDC149-201ENST00000324309 SSH1Q8WYL5 1049 aa15.3■□□□□ 0.04
CCDC149-201ENST00000324309 NLRP3Q96P20 1036 aa15.3■□□□□ 0.04
CCDC149-201ENST00000324309 MAP3K2Q9Y2U5 619 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms