RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 CHMP4AQ9BY43 222 aa16.57■□□□□ 0.24
SRRM1-201ENST00000323848 C19orf44Q9H6X5 657 aa16.57■□□□□ 0.24
SRRM1-201ENST00000323848 COPS6Q7L5N1 327 aa16.56■□□□□ 0.24
SRRM1-201ENST00000323848 UBE3BQ7Z3V4 1068 aa16.56■□□□□ 0.24
SRRM1-201ENST00000323848 ZFYVE9O95405 1425 aa16.56■□□□□ 0.24
SRRM1-201ENST00000323848 ALKQ9UM73 1620 aa16.56■□□□□ 0.24
SRRM1-201ENST00000323848 NBPF7P0C2Y1 421 aaPredicted RBP16.56■□□□□ 0.24
SRRM1-201ENST00000323848 GPTP24298 496 aa16.56■□□□□ 0.24
SRRM1-201ENST00000323848 IP6K1Q92551 441 aa16.56■□□□□ 0.24
SRRM1-201ENST00000323848 CFAP74Q9C0B2 1584 aa16.55■□□□□ 0.24
SRRM1-201ENST00000323848 USP19O94966 1318 aa16.55■□□□□ 0.24
SRRM1-201ENST00000323848 ANKRD44Q8N8A2 993 aa16.55■□□□□ 0.24
SRRM1-201ENST00000323848 ARHGAP31Q2M1Z3 1444 aa16.55■□□□□ 0.24
SRRM1-201ENST00000323848 VPS37CA5D8V6 355 aaPredicted RBP16.54■□□□□ 0.24
SRRM1-201ENST00000323848 GOLGA6L4A6NEF3 574 aa16.54■□□□□ 0.24
SRRM1-201ENST00000323848 ERC2O15083 957 aa16.54■□□□□ 0.24
SRRM1-201ENST00000323848 MPNDQ8N594 471 aa16.54■□□□□ 0.24
SRRM1-201ENST00000323848 DBF4Q9UBU7 674 aaPredicted RBP16.54■□□□□ 0.24
SRRM1-201ENST00000323848 RIMBP3CA6NJZ7 1639 aa16.54■□□□□ 0.24
SRRM1-201ENST00000323848 RIMBP3BA6NNM3 1639 aa16.54■□□□□ 0.24
SRRM1-201ENST00000323848 RIMBP3Q9UFD9 1639 aa16.54■□□□□ 0.24
SRRM1-201ENST00000323848 TRAK2O60296 914 aa16.54■□□□□ 0.24
SRRM1-201ENST00000323848 STK3Q13188 491 aa16.54■□□□□ 0.24
SRRM1-201ENST00000323848 XAGE3Q8WTP9 111 aa16.54■□□□□ 0.24
SRRM1-201ENST00000323848 FRMPD1Q5SYB0 1578 aa16.54■□□□□ 0.24
SRRM1-201ENST00000323848 ARHGAP45Q92619 1136 aa16.54■□□□□ 0.24
SRRM1-201ENST00000323848 PLEKHM2Q8IWE5 1019 aa16.53■□□□□ 0.24
SRRM1-201ENST00000323848 TCEANC2Q96MN5 208 aa16.53■□□□□ 0.24
SRRM1-201ENST00000323848 MROH2AA6NES4 1674 aa16.53■□□□□ 0.24
SRRM1-201ENST00000323848 BMP2KLQ5H9B9 411 aa16.53■□□□□ 0.24
SRRM1-201ENST00000323848 NDUFB9Q9Y6M9 179 aa16.53■□□□□ 0.24
SRRM1-201ENST00000323848 QRICH2Q9H0J4 1663 aa16.52■□□□□ 0.24
SRRM1-201ENST00000323848 SIRT2Q8IXJ6 389 aa16.52■□□□□ 0.24
SRRM1-201ENST00000323848 PTPRCP08575 1304 aa16.52■□□□□ 0.24
SRRM1-201ENST00000323848 A0A087WZG4 1122 aa16.52■□□□□ 0.24
SRRM1-201ENST00000323848 APPP05067 770 aa16.52■□□□□ 0.24
SRRM1-201ENST00000323848 CHMP4CQ96CF2 233 aa16.52■□□□□ 0.24
SRRM1-201ENST00000323848 NAP1L5Q96NT1 182 aaPredicted RBP16.52■□□□□ 0.24
SRRM1-201ENST00000323848 AMOTQ4VCS5 1084 aa16.52■□□□□ 0.23
SRRM1-201ENST00000323848 CADPS2Q86UW7 1296 aa16.52■□□□□ 0.23
SRRM1-201ENST00000323848 K7ELQ4 463 aaPredicted RBP16.51■□□□□ 0.23
SRRM1-201ENST00000323848 RNF214Q8ND24 703 aa16.51■□□□□ 0.23
SRRM1-201ENST00000323848 HDAC5Q9UQL6 1122 aa16.51■□□□□ 0.23
SRRM1-201ENST00000323848 PRPF40AO75400 957 aaKnown RBP16.51■□□□□ 0.23
SRRM1-201ENST00000323848 WASHC4Q2M389 1173 aa16.51■□□□□ 0.23
SRRM1-201ENST00000323848 TTC22Q5TAA0 569 aa16.51■□□□□ 0.23
SRRM1-201ENST00000323848 CNTROBQ8N137 903 aa16.51■□□□□ 0.23
SRRM1-201ENST00000323848 SBNO1A3KN83 1393 aa16.51■□□□□ 0.23
SRRM1-201ENST00000323848 PROSER3Q2NL68 480 aa16.51■□□□□ 0.23
SRRM1-201ENST00000323848 SSFA2P28290 1259 aa16.5■□□□□ 0.23
SRRM1-201ENST00000323848 PDE1AP54750 535 aa16.5■□□□□ 0.23
SRRM1-201ENST00000323848 DCTPP1Q9H773 170 aa16.5■□□□□ 0.23
SRRM1-201ENST00000323848 AXIN2Q9Y2T1 843 aa16.5■□□□□ 0.23
SRRM1-201ENST00000323848 FKBP4Q02790 459 aaKnown RBP eCLIP16.5■□□□□ 0.23
SRRM1-201ENST00000323848 BICDL1Q6ZP65 573 aa16.5■□□□□ 0.23
SRRM1-201ENST00000323848 NEXMIFQ5QGS0 1516 aa16.5■□□□□ 0.23
SRRM1-201ENST00000323848 CAMSAP1Q5T5Y3 1602 aa16.5■□□□□ 0.23
SRRM1-201ENST00000323848 PTPRMP28827 1452 aa16.49■□□□□ 0.23
SRRM1-201ENST00000323848 SNRKQ9NRH2 765 aa16.49■□□□□ 0.23
SRRM1-201ENST00000323848 MAP3K5Q99683 1374 aa16.49■□□□□ 0.23
SRRM1-201ENST00000323848 USP6P35125 1406 aa16.49■□□□□ 0.23
SRRM1-201ENST00000323848 ZKSCAN1P17029 563 aaPredicted RBP16.49■□□□□ 0.23
SRRM1-201ENST00000323848 CAVIN1Q6NZI2 390 aaKnown RBP16.49■□□□□ 0.23
SRRM1-201ENST00000323848 IFNL2Q8IZJ0 200 aa16.49■□□□□ 0.23
SRRM1-201ENST00000323848 ACSBG1Q96GR2 724 aa16.49■□□□□ 0.23
SRRM1-201ENST00000323848 PHF23Q9BUL5 403 aaPredicted RBP16.49■□□□□ 0.23
SRRM1-201ENST00000323848 GDPD2Q9HCC8 539 aa16.49■□□□□ 0.23
SRRM1-201ENST00000323848 RNMTO43148 476 aaKnown RBP16.48■□□□□ 0.23
SRRM1-201ENST00000323848 AKAP4Q5JQC9 854 aa16.48■□□□□ 0.23
SRRM1-201ENST00000323848 CLTCQ00610 1675 aaKnown RBP16.48■□□□□ 0.23
SRRM1-201ENST00000323848 MCM4P33991 863 aa16.48■□□□□ 0.23
SRRM1-201ENST00000323848 HSP90AB4PQ58FF6 505 aa16.48■□□□□ 0.23
SRRM1-201ENST00000323848 RHPN1Q8TCX5 695 aa16.48■□□□□ 0.23
SRRM1-201ENST00000323848 PLEKHG1Q9ULL1 1385 aa16.48■□□□□ 0.23
SRRM1-201ENST00000323848 CPA1P15085 419 aa16.48■□□□□ 0.23
SRRM1-201ENST00000323848 ARID3AQ99856 593 aa16.47■□□□□ 0.23
SRRM1-201ENST00000323848 PIK3C2BO00750 1634 aa16.47■□□□□ 0.23
SRRM1-201ENST00000323848 ADGRB1O14514 1584 aa16.47■□□□□ 0.23
SRRM1-201ENST00000323848 MROH1Q8NDA8 1641 aa16.47■□□□□ 0.23
SRRM1-201ENST00000323848 FBXW7Q969H0 707 aa16.47■□□□□ 0.23
SRRM1-201ENST00000323848 KIF1BPQ96EK5 621 aa16.47■□□□□ 0.23
SRRM1-201ENST00000323848 GLIPR1L2Q4G1C9 344 aa16.46■□□□□ 0.23
SRRM1-201ENST00000323848 PRPF40BQ6NWY9 871 aaKnown RBP16.46■□□□□ 0.23
SRRM1-201ENST00000323848 RUFY2Q8WXA3 655 aa16.46■□□□□ 0.23
SRRM1-201ENST00000323848 ZNF496Q96IT1 587 aaPredicted RBP16.46■□□□□ 0.23
SRRM1-201ENST00000323848 USP16Q9Y5T5 823 aa16.46■□□□□ 0.23
SRRM1-201ENST00000323848 RABEP1Q15276 862 aa16.46■□□□□ 0.23
SRRM1-201ENST00000323848 CHAMP1Q96JM3 812 aa16.46■□□□□ 0.23
SRRM1-201ENST00000323848 DDX11L8A8MPP1 907 aa16.46■□□□□ 0.22
SRRM1-201ENST00000323848 ANKRD13DQ6ZTN6 518 aa16.46■□□□□ 0.22
SRRM1-201ENST00000323848 L1TD1Q5T7N2 865 aaKnown RBP16.45■□□□□ 0.22
SRRM1-201ENST00000323848 NLRP1Q9C000 1473 aa16.45■□□□□ 0.22
SRRM1-201ENST00000323848 GSPT1P15170 499 aaKnown RBP16.45■□□□□ 0.22
SRRM1-201ENST00000323848 CEBPZQ03701 1054 aaKnown RBP16.45■□□□□ 0.22
SRRM1-201ENST00000323848 DNTTIP2Q5QJE6 756 aaKnown RBP16.45■□□□□ 0.22
SRRM1-201ENST00000323848 A1BGP04217 495 aa16.45■□□□□ 0.22
SRRM1-201ENST00000323848 FERMT3Q86UX7 667 aa16.45■□□□□ 0.22
SRRM1-201ENST00000323848 JAKMIP1Q96N16 626 aaKnown RBP16.45■□□□□ 0.22
SRRM1-201ENST00000323848 TMOD3Q9NYL9 352 aa16.44■□□□□ 0.22
SRRM1-201ENST00000323848 LMTK2Q8IWU2 1503 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms