RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 SLIT3O75094 1523 aa19.57■□□□□ 0.72
SMARCD2-202ENST00000323347 HOXB7P09629 217 aa19.57■□□□□ 0.72
SMARCD2-202ENST00000323347 NPHP4O75161 1426 aaPredicted RBP19.56■□□□□ 0.72
SMARCD2-202ENST00000323347 ATP8B2P98198 1209 aa19.55■□□□□ 0.72
SMARCD2-202ENST00000323347 NBPF6Q5VWK0 638 aa19.55■□□□□ 0.72
SMARCD2-202ENST00000323347 SLC4A10Q6U841 1118 aa19.55■□□□□ 0.72
SMARCD2-202ENST00000323347 OTUD7AQ8TE49 926 aaPredicted RBP19.55■□□□□ 0.72
SMARCD2-202ENST00000323347 NBPF4Q96M43 638 aa19.55■□□□□ 0.72
SMARCD2-202ENST00000323347 CHMP4AQ9BY43 222 aa19.55■□□□□ 0.72
SMARCD2-202ENST00000323347 SALL3Q9BXA9 1300 aa19.55■□□□□ 0.72
SMARCD2-202ENST00000323347 SDSP20132 328 aa19.55■□□□□ 0.72
SMARCD2-202ENST00000323347 PSME1Q06323 249 aa19.55■□□□□ 0.72
SMARCD2-202ENST00000323347 USP26Q9BXU7 913 aa19.55■□□□□ 0.72
SMARCD2-202ENST00000323347 LMO7Q8WWI1 1683 aa19.54■□□□□ 0.72
SMARCD2-202ENST00000323347 LTV1Q96GA3 475 aaPredicted RBP19.54■□□□□ 0.72
SMARCD2-202ENST00000323347 MST1RQ04912 1400 aa19.54■□□□□ 0.72
SMARCD2-202ENST00000323347 FKBP5Q13451 457 aaPredicted RBP19.53■□□□□ 0.72
SMARCD2-202ENST00000323347 ESCO1Q5FWF5 840 aa19.53■□□□□ 0.72
SMARCD2-202ENST00000323347 SPRYD3Q8NCJ5 442 aa19.53■□□□□ 0.72
SMARCD2-202ENST00000323347 KDM3BQ7LBC6 1761 aa19.53■□□□□ 0.72
SMARCD2-202ENST00000323347 OVOS2A0A0G2JMS6 1433 aa19.53■□□□□ 0.72
SMARCD2-202ENST00000323347 K7ELQ4 463 aaPredicted RBP19.53■□□□□ 0.72
SMARCD2-202ENST00000323347 SMARCA5O60264 1052 aaPredicted RBP19.53■□□□□ 0.72
SMARCD2-202ENST00000323347 RABEP1Q15276 862 aa19.52■□□□□ 0.72
SMARCD2-202ENST00000323347 ARHGEF25Q86VW2 580 aa19.52■□□□□ 0.72
SMARCD2-202ENST00000323347 PDE1AP54750 535 aa19.51■□□□□ 0.71
SMARCD2-202ENST00000323347 EIF4A1P60842 406 aaKnown RBP19.51■□□□□ 0.71
SMARCD2-202ENST00000323347 CASC1Q6TDU7 716 aa19.51■□□□□ 0.71
SMARCD2-202ENST00000323347 C14orf37Q86TY3 774 aa19.51■□□□□ 0.71
SMARCD2-202ENST00000323347 CAMTA1Q9Y6Y1 1673 aa19.51■□□□□ 0.71
SMARCD2-202ENST00000323347 HSP90AB1P08238 724 aaKnown RBP19.51■□□□□ 0.71
SMARCD2-202ENST00000323347 AKAP4Q5JQC9 854 aa19.51■□□□□ 0.71
SMARCD2-202ENST00000323347 USHBP1Q8N6Y0 703 aa19.51■□□□□ 0.71
SMARCD2-202ENST00000323347 IBTKQ9P2D0 1353 aaPredicted RBP19.5■□□□□ 0.71
SMARCD2-202ENST00000323347 CD2BP2O95400 341 aaKnown RBP19.5■□□□□ 0.71
SMARCD2-202ENST00000323347 USP44Q9H0E7 712 aa19.5■□□□□ 0.71
SMARCD2-202ENST00000323347 AMOTQ4VCS5 1084 aa19.49■□□□□ 0.71
SMARCD2-202ENST00000323347 HDGFL1Q5TGJ6 251 aa19.49■□□□□ 0.71
SMARCD2-202ENST00000323347 RAB3GAP1Q15042 981 aa19.49■□□□□ 0.71
SMARCD2-202ENST00000323347 PLEKHO1Q53GL0 409 aaPredicted RBP19.49■□□□□ 0.71
SMARCD2-202ENST00000323347 STAP2Q9UGK3 403 aa19.49■□□□□ 0.71
SMARCD2-202ENST00000323347 TRPM3Q9HCF6 1732 aaPredicted RBP19.48■□□□□ 0.71
SMARCD2-202ENST00000323347 GCP02774 474 aa19.48■□□□□ 0.71
SMARCD2-202ENST00000323347 LRRCC1Q9C099 1032 aa19.48■□□□□ 0.71
SMARCD2-202ENST00000323347 DDX11L8A8MPP1 907 aa19.47■□□□□ 0.71
SMARCD2-202ENST00000323347 RBM42Q9BTD8 480 aaKnown RBP19.47■□□□□ 0.71
SMARCD2-202ENST00000323347 LGR6Q9HBX8 967 aa19.47■□□□□ 0.71
SMARCD2-202ENST00000323347 TUBGCP6Q96RT7 1819 aa19.47■□□□□ 0.71
SMARCD2-202ENST00000323347 PNMA6EA0A0J9YXQ4 647 aa19.47■□□□□ 0.71
SMARCD2-202ENST00000323347 REC8O95072 547 aa19.47■□□□□ 0.71
SMARCD2-202ENST00000323347 SSH3Q8TE77 659 aa19.47■□□□□ 0.71
SMARCD2-202ENST00000323347 UBAP1LF5GYI3 381 aa19.46■□□□□ 0.71
SMARCD2-202ENST00000323347 CLEC17AQ6ZS10 378 aa19.46■□□□□ 0.71
SMARCD2-202ENST00000323347 RBM33Q96EV2 1170 aaKnown RBP19.46■□□□□ 0.71
SMARCD2-202ENST00000323347 AOX1Q06278 1338 aa19.46■□□□□ 0.71
SMARCD2-202ENST00000323347 KIF1AQ12756 1690 aa19.46■□□□□ 0.71
SMARCD2-202ENST00000323347 RGPD2P0DJD1 1756 aa19.45■□□□□ 0.7
SMARCD2-202ENST00000323347 ORAI2Q96SN7 254 aa19.45■□□□□ 0.7
SMARCD2-202ENST00000323347 SRCIN1Q9C0H9 1055 aa19.45■□□□□ 0.7
SMARCD2-202ENST00000323347 HEG1Q9ULI3 1381 aa19.45■□□□□ 0.7
SMARCD2-202ENST00000323347 ERC2O15083 957 aa19.45■□□□□ 0.7
SMARCD2-202ENST00000323347 POLA2Q14181 598 aa19.45■□□□□ 0.7
SMARCD2-202ENST00000323347 EXOC6BQ9Y2D4 811 aa19.45■□□□□ 0.7
SMARCD2-202ENST00000323347 LRRFIP2Q9Y608 721 aaKnown RBP19.45■□□□□ 0.7
SMARCD2-202ENST00000323347 ADAMTS7Q9UKP4 1686 aa19.44■□□□□ 0.7
SMARCD2-202ENST00000323347 NECTIN2Q92692 538 aa19.44■□□□□ 0.7
SMARCD2-202ENST00000323347 TNPO1Q92973 898 aaKnown RBP19.44■□□□□ 0.7
SMARCD2-202ENST00000323347 PHAXQ9H814 394 aaKnown RBP19.44■□□□□ 0.7
SMARCD2-202ENST00000323347 APBB1O00213 710 aa19.43■□□□□ 0.7
SMARCD2-202ENST00000323347 UBTFL1P0CB47 393 aaPredicted RBP19.43■□□□□ 0.7
SMARCD2-202ENST00000323347 PTMSP20962 102 aa19.43■□□□□ 0.7
SMARCD2-202ENST00000323347 RNMTO43148 476 aaKnown RBP19.43■□□□□ 0.7
SMARCD2-202ENST00000323347 TRAK2O60296 914 aa19.43■□□□□ 0.7
SMARCD2-202ENST00000323347 RAB11FIP3O75154 756 aa19.43■□□□□ 0.7
SMARCD2-202ENST00000323347 L1TD1Q5T7N2 865 aaKnown RBP19.43■□□□□ 0.7
SMARCD2-202ENST00000323347 ZNF530Q6P9A1 599 aaPredicted RBP19.43■□□□□ 0.7
SMARCD2-202ENST00000323347 FSD2A1L4K1 749 aa19.42■□□□□ 0.7
SMARCD2-202ENST00000323347 MX1P20591 662 aa19.42■□□□□ 0.7
SMARCD2-202ENST00000323347 UBE2Q2Q8WVN8 375 aa19.42■□□□□ 0.7
SMARCD2-202ENST00000323347 LRRC59Q96AG4 307 aaKnown RBP19.42■□□□□ 0.7
SMARCD2-202ENST00000323347 IL17RAQ96F46 866 aa19.42■□□□□ 0.7
SMARCD2-202ENST00000323347 C1orf167Q5SNV9 1468 aa19.41■□□□□ 0.7
SMARCD2-202ENST00000323347 TEFQ10587 303 aa19.41■□□□□ 0.7
SMARCD2-202ENST00000323347 BEND3Q5T5X7 828 aa19.41■□□□□ 0.7
SMARCD2-202ENST00000323347 GBP4Q96PP9 640 aa19.41■□□□□ 0.7
SMARCD2-202ENST00000323347 BTBD11A6QL63 1104 aa19.41■□□□□ 0.7
SMARCD2-202ENST00000323347 EPB41L2O43491 1005 aaKnown RBP19.41■□□□□ 0.7
SMARCD2-202ENST00000323347 IL27Q8NEV9 243 aa19.4■□□□□ 0.7
SMARCD2-202ENST00000323347 ANKRD24Q8TF21 1146 aa19.4■□□□□ 0.7
SMARCD2-202ENST00000323347 BRPF3Q9ULD4 1205 aa19.4■□□□□ 0.7
SMARCD2-202ENST00000323347 KRT28Q7Z3Y7 464 aa19.39■□□□□ 0.7
SMARCD2-202ENST00000323347 DNAAF4Q8WXU2 420 aa19.39■□□□□ 0.7
SMARCD2-202ENST00000323347 PXDNQ92626 1479 aa19.39■□□□□ 0.69
SMARCD2-202ENST00000323347 SIPA1L3O60292 1781 aaPredicted RBP19.39■□□□□ 0.69
SMARCD2-202ENST00000323347 KCNQ3O43525 872 aa19.39■□□□□ 0.69
SMARCD2-202ENST00000323347 C19orf44Q9H6X5 657 aa19.39■□□□□ 0.69
SMARCD2-202ENST00000323347 CHPF2Q9P2E5 772 aa19.39■□□□□ 0.69
SMARCD2-202ENST00000323347 PLEKHG2Q9H7P9 1386 aa19.38■□□□□ 0.69
SMARCD2-202ENST00000323347 ALS2Q96Q42 1657 aa19.38■□□□□ 0.69
SMARCD2-202ENST00000323347 HSP90AA1P07900 732 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms