RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 NOL8Q76FK4 1167 aaKnown RBP15.05■□□□□ 0
SEC24A-201ENST00000322887 KCNH5Q8NCM2 988 aa15.05■□□□□ 0
SEC24A-201ENST00000322887 DTNBO60941 627 aa15.05■□□□□ -0
SEC24A-201ENST00000322887 FAM13BQ9NYF5 915 aa15.05■□□□□ -0
SEC24A-201ENST00000322887 PRIM1P49642 420 aaKnown RBP15.04■□□□□ -0
SEC24A-201ENST00000322887 CRYBG1Q9Y4K1 1723 aa15.04■□□□□ -0
SEC24A-201ENST00000322887 PRPF40AO75400 957 aaKnown RBP15.04■□□□□ -0
SEC24A-201ENST00000322887 RNF214Q8ND24 703 aa15.04■□□□□ -0
SEC24A-201ENST00000322887 KIF24Q5T7B8 1368 aa15.04■□□□□ -0
SEC24A-201ENST00000322887 TSHZ3Q63HK5 1081 aa15.03■□□□□ -0
SEC24A-201ENST00000322887 PNPLA6Q8IY17 1366 aa15.03■□□□□ -0
SEC24A-201ENST00000322887 ZRANB1Q9UGI0 708 aa15.03■□□□□ -0
SEC24A-201ENST00000322887 DIAPH1O60610 1272 aaKnown RBP15.03■□□□□ -0
SEC24A-201ENST00000322887 NFAT5O94916 1531 aa15.03■□□□□ -0
SEC24A-201ENST00000322887 ZSCAN23Q3MJ62 389 aa15.02■□□□□ -0
SEC24A-201ENST00000322887 C8orf58Q8NAV2 365 aa15.02■□□□□ -0
SEC24A-201ENST00000322887 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.02■□□□□ -0
SEC24A-201ENST00000322887 KIF16BQ96L93 1317 aa15.02□□□□□ -0.01
SEC24A-201ENST00000322887 VAMP4O75379 141 aa15.02□□□□□ -0.01
SEC24A-201ENST00000322887 IPO8O15397 1037 aaKnown RBP15.01□□□□□ -0.01
SEC24A-201ENST00000322887 MRPL50Q8N5N7 158 aaKnown RBP15.01□□□□□ -0.01
SEC24A-201ENST00000322887 GPT2Q8TD30 523 aa15.01□□□□□ -0.01
SEC24A-201ENST00000322887 FBXO41Q8TF61 875 aa15.01□□□□□ -0.01
SEC24A-201ENST00000322887 JCADQ9P266 1359 aa15.01□□□□□ -0.01
SEC24A-201ENST00000322887 PHRF1Q9P1Y6 1649 aaKnown RBP15.01□□□□□ -0.01
SEC24A-201ENST00000322887 ABCC6O95255 1503 aa15.01□□□□□ -0.01
SEC24A-201ENST00000322887 GCP02774 474 aa15.01□□□□□ -0.01
SEC24A-201ENST00000322887 ZSCAN30Q86W11 494 aa15.01□□□□□ -0.01
SEC24A-201ENST00000322887 CPDO75976 1380 aa15□□□□□ -0.01
SEC24A-201ENST00000322887 PLEKHM2Q8IWE5 1019 aa15□□□□□ -0.01
SEC24A-201ENST00000322887 MBIPQ9NS73 344 aa15□□□□□ -0.01
SEC24A-201ENST00000322887 LMBRD1Q9NUN5 540 aa15□□□□□ -0.01
SEC24A-201ENST00000322887 CIZ1Q9ULV3 898 aaPredicted RBP15□□□□□ -0.01
SEC24A-201ENST00000322887 EMILIN1Q9Y6C2 1016 aa15□□□□□ -0.01
SEC24A-201ENST00000322887 COL3A1P02461 1466 aaPredicted RBP15□□□□□ -0.01
SEC24A-201ENST00000322887 CCDC173Q0VFZ6 552 aa15□□□□□ -0.01
SEC24A-201ENST00000322887 ZDHHC9Q9Y397 364 aa15□□□□□ -0.01
SEC24A-201ENST00000322887 SYCE3A1L190 88 aa14.99□□□□□ -0.01
SEC24A-201ENST00000322887 MSNP26038 577 aaKnown RBP14.99□□□□□ -0.01
SEC24A-201ENST00000322887 KLHL40Q2TBA0 621 aa14.99□□□□□ -0.01
SEC24A-201ENST00000322887 LMOD2Q6P5Q4 547 aa14.99□□□□□ -0.01
SEC24A-201ENST00000322887 TSC1Q92574 1164 aa14.99□□□□□ -0.01
SEC24A-201ENST00000322887 ABCA3Q99758 1704 aa14.99□□□□□ -0.01
SEC24A-201ENST00000322887 PPP1R9BQ96SB3 815 aa14.99□□□□□ -0.01
SEC24A-201ENST00000322887 RTL1A6NKG5 1358 aa14.99□□□□□ -0.01
SEC24A-201ENST00000322887 SKOR2Q2VWA4 1001 aaPredicted RBP14.98□□□□□ -0.01
SEC24A-201ENST00000322887 NUTM2GQ5VZR2 741 aa14.98□□□□□ -0.01
SEC24A-201ENST00000322887 CDC45O75419 566 aa14.98□□□□□ -0.01
SEC24A-201ENST00000322887 POLKQ9UBT6 870 aa14.98□□□□□ -0.01
SEC24A-201ENST00000322887 SPATA31A6Q5VVP1 1343 aa14.97□□□□□ -0.01
SEC24A-201ENST00000322887 CDK12Q9NYV4 1490 aaPredicted RBP14.97□□□□□ -0.01
SEC24A-201ENST00000322887 CT47B1P0C2W7 299 aaPredicted RBP14.97□□□□□ -0.01
SEC24A-201ENST00000322887 HSPA1LP34931 641 aa14.97□□□□□ -0.01
SEC24A-201ENST00000322887 GDPD2Q9HCC8 539 aa14.97□□□□□ -0.01
SEC24A-201ENST00000322887 TMEM63CQ9P1W3 806 aa14.97□□□□□ -0.01
SEC24A-201ENST00000322887 CALD1Q05682 793 aaKnown RBP14.97□□□□□ -0.01
SEC24A-201ENST00000322887 FAM177BA6PVY3 158 aa14.96□□□□□ -0.01
SEC24A-201ENST00000322887 ARHGEF25Q86VW2 580 aa14.96□□□□□ -0.01
SEC24A-201ENST00000322887 PRDM10Q9NQV6 1147 aa14.96□□□□□ -0.01
SEC24A-201ENST00000322887 GOLGA6L22H0YM25 854 aa14.96□□□□□ -0.01
SEC24A-201ENST00000322887 OFD1O75665 1012 aa14.95□□□□□ -0.02
SEC24A-201ENST00000322887 TWISTNBQ3B726 338 aaPredicted RBP14.95□□□□□ -0.02
SEC24A-201ENST00000322887 USP26Q9BXU7 913 aa14.95□□□□□ -0.02
SEC24A-201ENST00000322887 SDSP20132 328 aa14.95□□□□□ -0.02
SEC24A-201ENST00000322887 GCC1Q96CN9 775 aa14.95□□□□□ -0.02
SEC24A-201ENST00000322887 MAP3K19Q56UN5 1328 aa14.95□□□□□ -0.02
SEC24A-201ENST00000322887 FLT4P35916 1363 aa14.95□□□□□ -0.02
SEC24A-201ENST00000322887 RRS1Q15050 365 aaKnown RBP14.94□□□□□ -0.02
SEC24A-201ENST00000322887 ZNF830Q96NB3 372 aaPredicted RBP14.94□□□□□ -0.02
SEC24A-201ENST00000322887 C17orf53Q8N3J3 647 aaPredicted RBP14.94□□□□□ -0.02
SEC24A-201ENST00000322887 ANP32BQ92688 251 aaKnown RBP14.94□□□□□ -0.02
SEC24A-201ENST00000322887 TPM2P07951 284 aa14.94□□□□□ -0.02
SEC24A-201ENST00000322887 ALDH1L2Q3SY69 923 aa14.94□□□□□ -0.02
SEC24A-201ENST00000322887 MAP2P11137 1827 aaKnown RBP14.93□□□□□ -0.02
SEC24A-201ENST00000322887 UQCRHLA0A096LP55 91 aa14.93□□□□□ -0.02
SEC24A-201ENST00000322887 UQCRHP07919 91 aa14.93□□□□□ -0.02
SEC24A-201ENST00000322887 TTC22Q5TAA0 569 aa14.93□□□□□ -0.02
SEC24A-201ENST00000322887 MIS18AQ9NYP9 233 aa14.93□□□□□ -0.02
SEC24A-201ENST00000322887 ISY1Q9ULR0 285 aaKnown RBP14.93□□□□□ -0.02
SEC24A-201ENST00000322887 IP6K1Q92551 441 aa14.93□□□□□ -0.02
SEC24A-201ENST00000322887 CABLES1Q8TDN4 633 aa14.92□□□□□ -0.02
SEC24A-201ENST00000322887 PEAK1Q9H792 1746 aa14.92□□□□□ -0.02
SEC24A-201ENST00000322887 CYP2E1P05181 493 aaPredicted RBP14.92□□□□□ -0.02
SEC24A-201ENST00000322887 LARP6Q9BRS8 491 aaKnown RBP14.92□□□□□ -0.02
SEC24A-201ENST00000322887 LTN1O94822 1766 aa14.92□□□□□ -0.02
SEC24A-201ENST00000322887 IL16Q14005 1332 aa14.91□□□□□ -0.02
SEC24A-201ENST00000322887 PDCL3Q9H2J4 239 aa14.91□□□□□ -0.02
SEC24A-201ENST00000322887 KIAA0232Q92628 1395 aa14.91□□□□□ -0.02
SEC24A-201ENST00000322887 MEIS3Q99687 375 aa14.91□□□□□ -0.02
SEC24A-201ENST00000322887 COL18A1P39060 1754 aa14.91□□□□□ -0.02
SEC24A-201ENST00000322887 ABCC4O15439 1325 aa14.9□□□□□ -0.02
SEC24A-201ENST00000322887 HOXC9P31274 260 aa14.9□□□□□ -0.02
SEC24A-201ENST00000322887 HAP1P54257 671 aaPredicted RBP14.9□□□□□ -0.02
SEC24A-201ENST00000322887 ZNF445P59923 1031 aa14.9□□□□□ -0.02
SEC24A-201ENST00000322887 NFE2L2Q16236 605 aa14.9□□□□□ -0.02
SEC24A-201ENST00000322887 LMO7Q8WWI1 1683 aa14.9□□□□□ -0.02
SEC24A-201ENST00000322887 SOX12O15370 315 aa14.9□□□□□ -0.02
SEC24A-201ENST00000322887 AMPHP49418 695 aa14.9□□□□□ -0.02
SEC24A-201ENST00000322887 AEBP1Q8IUX7 1158 aa14.9□□□□□ -0.02
SEC24A-201ENST00000322887 RABEP1Q15276 862 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms