RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 SNRKQ9NRH2 765 aa13.28□□□□□ -0.28
TOP3A-201ENST00000321105 CNNM1Q9NRU3 951 aa13.28□□□□□ -0.28
TOP3A-201ENST00000321105 TRPM2O94759 1503 aa13.28□□□□□ -0.28
TOP3A-201ENST00000321105 XAGE3Q8WTP9 111 aa13.28□□□□□ -0.28
TOP3A-201ENST00000321105 BMP2KLQ5H9B9 411 aa13.27□□□□□ -0.28
TOP3A-201ENST00000321105 KLHDC4Q8TBB5 520 aa13.27□□□□□ -0.28
TOP3A-201ENST00000321105 JAKMIP1Q96N16 626 aaKnown RBP13.27□□□□□ -0.28
TOP3A-201ENST00000321105 GDPD2Q9HCC8 539 aa13.27□□□□□ -0.28
TOP3A-201ENST00000321105 MLH3Q9UHC1 1453 aa13.27□□□□□ -0.28
TOP3A-201ENST00000321105 ZMYM4Q5VZL5 1548 aa13.27□□□□□ -0.29
TOP3A-201ENST00000321105 SSFA2P28290 1259 aa13.27□□□□□ -0.29
TOP3A-201ENST00000321105 NUCB2P80303 420 aa13.27□□□□□ -0.29
TOP3A-201ENST00000321105 RNF20Q5VTR2 975 aa13.27□□□□□ -0.29
TOP3A-201ENST00000321105 CEP85Q6P2H3 762 aa13.27□□□□□ -0.29
TOP3A-201ENST00000321105 KIF1BPQ96EK5 621 aa13.27□□□□□ -0.29
TOP3A-201ENST00000321105 PRPF40BQ6NWY9 871 aaKnown RBP13.26□□□□□ -0.29
TOP3A-201ENST00000321105 CADPS2Q86UW7 1296 aa13.26□□□□□ -0.29
TOP3A-201ENST00000321105 CREBRFQ8IUR6 639 aa13.26□□□□□ -0.29
TOP3A-201ENST00000321105 SMC5Q8IY18 1101 aa13.26□□□□□ -0.29
TOP3A-201ENST00000321105 ANKRD44Q8N8A2 993 aa13.26□□□□□ -0.29
TOP3A-201ENST00000321105 MEX3CQ5U5Q3 659 aaKnown RBP13.26□□□□□ -0.29
TOP3A-201ENST00000321105 BCL11BQ9C0K0 894 aaPredicted RBP13.26□□□□□ -0.29
TOP3A-201ENST00000321105 C19orf44Q9H6X5 657 aa13.26□□□□□ -0.29
TOP3A-201ENST00000321105 PTPRCP08575 1304 aa13.26□□□□□ -0.29
TOP3A-201ENST00000321105 CPLX1O14810 134 aa13.26□□□□□ -0.29
TOP3A-201ENST00000321105 CCDC57Q2TAC2 916 aa13.26□□□□□ -0.29
TOP3A-201ENST00000321105 CHL1O00533 1208 aa13.25□□□□□ -0.29
TOP3A-201ENST00000321105 KIF6Q6ZMV9 814 aa13.25□□□□□ -0.29
TOP3A-201ENST00000321105 ARHGAP45Q92619 1136 aa13.25□□□□□ -0.29
TOP3A-201ENST00000321105 SYAP1Q96A49 352 aaPredicted RBP13.25□□□□□ -0.29
TOP3A-201ENST00000321105 IFNL2Q8IZJ0 200 aa13.25□□□□□ -0.29
TOP3A-201ENST00000321105 IL17REQ8NFR9 667 aa13.25□□□□□ -0.29
TOP3A-201ENST00000321105 ATP2B1P20020 1258 aa13.25□□□□□ -0.29
TOP3A-201ENST00000321105 RRP12Q5JTH9 1297 aaKnown RBP13.25□□□□□ -0.29
TOP3A-201ENST00000321105 CASTP20810 708 aaKnown RBP13.24□□□□□ -0.29
TOP3A-201ENST00000321105 PDE1AP54750 535 aa13.24□□□□□ -0.29
TOP3A-201ENST00000321105 TTC22Q5TAA0 569 aa13.24□□□□□ -0.29
TOP3A-201ENST00000321105 EDC4Q6P2E9 1401 aaKnown RBP13.24□□□□□ -0.29
TOP3A-201ENST00000321105 LARP1Q6PKG0 1096 aaKnown RBP13.24□□□□□ -0.29
TOP3A-201ENST00000321105 TRMT2AQ8IZ69 625 aaKnown RBP13.24□□□□□ -0.29
TOP3A-201ENST00000321105 BICD2Q8TD16 824 aa13.24□□□□□ -0.29
TOP3A-201ENST00000321105 TMOD3Q9NYL9 352 aa13.24□□□□□ -0.29
TOP3A-201ENST00000321105 SBNO2Q9Y2G9 1366 aa13.24□□□□□ -0.29
TOP3A-201ENST00000321105 PNMA6EA0A0J9YXQ4 647 aa13.24□□□□□ -0.29
TOP3A-201ENST00000321105 RAD21O60216 631 aa13.24□□□□□ -0.29
TOP3A-201ENST00000321105 CLTCL1P53675 1640 aa13.24□□□□□ -0.29
TOP3A-201ENST00000321105 RHPN1Q8TCX5 695 aa13.24□□□□□ -0.29
TOP3A-201ENST00000321105 DDX11Q96FC9 970 aa13.24□□□□□ -0.29
TOP3A-201ENST00000321105 NBPF7P0C2Y1 421 aaPredicted RBP13.24□□□□□ -0.29
TOP3A-201ENST00000321105 IP6K1Q92551 441 aa13.24□□□□□ -0.29
TOP3A-201ENST00000321105 ACSBG1Q96GR2 724 aa13.24□□□□□ -0.29
TOP3A-201ENST00000321105 PLEKHG3A1L390 1219 aa13.23□□□□□ -0.29
TOP3A-201ENST00000321105 ANKRD13DQ6ZTN6 518 aa13.23□□□□□ -0.29
TOP3A-201ENST00000321105 PLEKHM2Q8IWE5 1019 aa13.23□□□□□ -0.29
TOP3A-201ENST00000321105 CEP126Q9P2H0 1117 aa13.23□□□□□ -0.29
TOP3A-201ENST00000321105 MSH6P52701 1360 aa13.23□□□□□ -0.29
TOP3A-201ENST00000321105 NFXL1Q6ZNB6 911 aa13.23□□□□□ -0.29
TOP3A-201ENST00000321105 FMNL2Q96PY5 1086 aa13.22□□□□□ -0.29
TOP3A-201ENST00000321105 NDUFB9Q9Y6M9 179 aa13.22□□□□□ -0.29
TOP3A-201ENST00000321105 ADCY10Q96PN6 1610 aa13.22□□□□□ -0.29
TOP3A-201ENST00000321105 DCTPP1Q9H773 170 aa13.22□□□□□ -0.29
TOP3A-201ENST00000321105 G3V3G9 751 aa13.22□□□□□ -0.29
TOP3A-201ENST00000321105 IDH1O75874 414 aaKnown RBP13.22□□□□□ -0.29
TOP3A-201ENST00000321105 TRDNQ13061 729 aa13.22□□□□□ -0.29
TOP3A-201ENST00000321105 DCAF8Q5TAQ9 597 aa13.22□□□□□ -0.29
TOP3A-201ENST00000321105 ERC1Q8IUD2 1116 aa13.22□□□□□ -0.29
TOP3A-201ENST00000321105 CCDC83Q8IWF9 413 aa13.22□□□□□ -0.29
TOP3A-201ENST00000321105 TNPO1Q92973 898 aaKnown RBP13.22□□□□□ -0.29
TOP3A-201ENST00000321105 USP19O94966 1318 aa13.21□□□□□ -0.29
TOP3A-201ENST00000321105 RALYLQ86SE5 291 aaKnown RBP13.21□□□□□ -0.29
TOP3A-201ENST00000321105 PRAMEF22A3QJZ6 481 aa13.21□□□□□ -0.3
TOP3A-201ENST00000321105 GLRX3O76003 335 aaKnown RBP13.21□□□□□ -0.3
TOP3A-201ENST00000321105 SKOR2Q2VWA4 1001 aaPredicted RBP13.21□□□□□ -0.3
TOP3A-201ENST00000321105 AKAP4Q5JQC9 854 aa13.21□□□□□ -0.3
TOP3A-201ENST00000321105 DDX46Q7L014 1031 aaKnown RBP13.21□□□□□ -0.3
TOP3A-201ENST00000321105 CYP46A1Q9Y6A2 500 aa13.21□□□□□ -0.3
TOP3A-201ENST00000321105 ABCC3O15438 1527 aa13.21□□□□□ -0.3
TOP3A-201ENST00000321105 TTC39AQ5SRH9 613 aa13.2□□□□□ -0.3
TOP3A-201ENST00000321105 CPA1P15085 419 aa13.2□□□□□ -0.3
TOP3A-201ENST00000321105 RAB11FIP4Q86YS3 637 aa13.2□□□□□ -0.3
TOP3A-201ENST00000321105 HYPKQ9NX55 129 aa13.2□□□□□ -0.3
TOP3A-201ENST00000321105 SETD1BQ9UPS6 1966 aaKnown RBP13.19□□□□□ -0.3
TOP3A-201ENST00000321105 PIK3R4Q99570 1358 aa13.19□□□□□ -0.3
TOP3A-201ENST00000321105 LMBR1LQ6UX01 489 aa13.19□□□□□ -0.3
TOP3A-201ENST00000321105 MPHOSPH8Q99549 860 aa13.19□□□□□ -0.3
TOP3A-201ENST00000321105 LRRC2Q9BYS8 371 aa13.19□□□□□ -0.3
TOP3A-201ENST00000321105 ATP6V1DQ9Y5K8 247 aa13.19□□□□□ -0.3
TOP3A-201ENST00000321105 SNRPA1P09661 255 aaKnown RBP13.18□□□□□ -0.3
TOP3A-201ENST00000321105 PTMSP20962 102 aa13.18□□□□□ -0.3
TOP3A-201ENST00000321105 CCDC158Q5M9N0 1113 aa13.18□□□□□ -0.3
TOP3A-201ENST00000321105 BLOC1S2Q6QNY1 142 aa13.18□□□□□ -0.3
TOP3A-201ENST00000321105 ABCF2Q9UG63 623 aa13.18□□□□□ -0.3
TOP3A-201ENST00000321105 NPHP3Q7Z494 1330 aa13.18□□□□□ -0.3
TOP3A-201ENST00000321105 ZFYVE9O95405 1425 aa13.18□□□□□ -0.3
TOP3A-201ENST00000321105 RNMTO43148 476 aaKnown RBP13.18□□□□□ -0.3
TOP3A-201ENST00000321105 ATP8B2P98198 1209 aa13.18□□□□□ -0.3
TOP3A-201ENST00000321105 ZCRB1Q8TBF4 217 aaKnown RBP13.18□□□□□ -0.3
TOP3A-201ENST00000321105 MAP3K5Q99683 1374 aa13.18□□□□□ -0.3
TOP3A-201ENST00000321105 GOLIM4O00461 696 aa13.18□□□□□ -0.3
TOP3A-201ENST00000321105 NASPP49321 788 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms