RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 UQCRHP07919 91 aa18.34■□□□□ 0.53
GCFC2-201ENST00000321027 RALYLQ86SE5 291 aaKnown RBP18.34■□□□□ 0.53
GCFC2-201ENST00000321027 MRPL50Q8N5N7 158 aaKnown RBP18.34■□□□□ 0.53
GCFC2-201ENST00000321027 CCDC83Q8IWF9 413 aa18.34■□□□□ 0.53
GCFC2-201ENST00000321027 NPATQ14207 1427 aa18.34■□□□□ 0.53
GCFC2-201ENST00000321027 IPO7O95373 1038 aaKnown RBP18.33■□□□□ 0.53
GCFC2-201ENST00000321027 FLIIQ13045 1269 aa18.33■□□□□ 0.53
GCFC2-201ENST00000321027 ERC1Q8IUD2 1116 aa18.33■□□□□ 0.53
GCFC2-201ENST00000321027 KRT85P78386 507 aa18.33■□□□□ 0.53
GCFC2-201ENST00000321027 ARHGAP45Q92619 1136 aa18.33■□□□□ 0.53
GCFC2-201ENST00000321027 PCMTD1Q96MG8 357 aaPredicted RBP18.33■□□□□ 0.53
GCFC2-201ENST00000321027 CCDC192P0DO97 292 aa18.33■□□□□ 0.52
GCFC2-201ENST00000321027 BLOC1S2Q6QNY1 142 aa18.33■□□□□ 0.52
GCFC2-201ENST00000321027 TTC37Q6PGP7 1564 aa18.32■□□□□ 0.52
GCFC2-201ENST00000321027 KLHL40Q2TBA0 621 aa18.32■□□□□ 0.52
GCFC2-201ENST00000321027 VPS37DQ86XT2 251 aa18.32■□□□□ 0.52
GCFC2-201ENST00000321027 DHX16O60231 1041 aaKnown RBP18.32■□□□□ 0.52
GCFC2-201ENST00000321027 KIF1BPQ96EK5 621 aa18.32■□□□□ 0.52
GCFC2-201ENST00000321027 FAM177BA6PVY3 158 aa18.31■□□□□ 0.52
GCFC2-201ENST00000321027 PRPF40BQ6NWY9 871 aaKnown RBP18.31■□□□□ 0.52
GCFC2-201ENST00000321027 EIF4A2Q14240 407 aaKnown RBP18.31■□□□□ 0.52
GCFC2-201ENST00000321027 MYO5CQ9NQX4 1742 aa18.31■□□□□ 0.52
GCFC2-201ENST00000321027 KINO60870 393 aaKnown RBP18.31■□□□□ 0.52
GCFC2-201ENST00000321027 MAP7D2Q96T17 732 aa18.31■□□□□ 0.52
GCFC2-201ENST00000321027 TNMDQ9H2S6 317 aa18.31■□□□□ 0.52
GCFC2-201ENST00000321027 HIP1O00291 1037 aa18.31■□□□□ 0.52
GCFC2-201ENST00000321027 PRKCSHP14314 528 aaPredicted RBP18.3■□□□□ 0.52
GCFC2-201ENST00000321027 NPC1L1Q9UHC9 1359 aa18.3■□□□□ 0.52
GCFC2-201ENST00000321027 ATP10AO60312 1499 aa18.3■□□□□ 0.52
GCFC2-201ENST00000321027 ERCC6L2Q5T890 1561 aa18.3■□□□□ 0.52
GCFC2-201ENST00000321027 HMGN5P82970 282 aaKnown RBP18.29■□□□□ 0.52
GCFC2-201ENST00000321027 SNX21Q969T3 373 aa18.29■□□□□ 0.52
GCFC2-201ENST00000321027 CAMK4Q16566 473 aa18.29■□□□□ 0.52
GCFC2-201ENST00000321027 KRT28Q7Z3Y7 464 aa18.29■□□□□ 0.52
GCFC2-201ENST00000321027 RRP9O43818 475 aaKnown RBP18.29■□□□□ 0.52
GCFC2-201ENST00000321027 ATP2B1P20020 1258 aa18.29■□□□□ 0.52
GCFC2-201ENST00000321027 ANKRD44Q8N8A2 993 aa18.29■□□□□ 0.52
GCFC2-201ENST00000321027 ANKRD20A12PQ8NF67 263 aa18.29■□□□□ 0.52
GCFC2-201ENST00000321027 PTPRCP08575 1304 aa18.28■□□□□ 0.52
GCFC2-201ENST00000321027 ANXA1P04083 346 aa18.28■□□□□ 0.52
GCFC2-201ENST00000321027 DDX11Q96FC9 970 aa18.28■□□□□ 0.52
GCFC2-201ENST00000321027 USP25Q9UHP3 1055 aa18.28■□□□□ 0.52
GCFC2-201ENST00000321027 TMX3Q96JJ7 454 aa18.28■□□□□ 0.52
GCFC2-201ENST00000321027 GLRX3O76003 335 aaKnown RBP18.27■□□□□ 0.52
GCFC2-201ENST00000321027 GPS2Q13227 327 aa18.27■□□□□ 0.52
GCFC2-201ENST00000321027 SAFBQ15424 915 aaKnown RBP eCLIP18.27■□□□□ 0.52
GCFC2-201ENST00000321027 AMOTQ4VCS5 1084 aa18.27■□□□□ 0.52
GCFC2-201ENST00000321027 BOLA2Q9H3K6 86 aa18.27■□□□□ 0.52
GCFC2-201ENST00000321027 TRIM35Q9UPQ4 493 aa18.27■□□□□ 0.52
GCFC2-201ENST00000321027 YEATS2Q9ULM3 1422 aa18.27■□□□□ 0.52
GCFC2-201ENST00000321027 ABCC1P33527 1531 aa18.27■□□□□ 0.52
GCFC2-201ENST00000321027 MAGI2Q86UL8 1455 aa18.27■□□□□ 0.52
GCFC2-201ENST00000321027 PTCD1O75127 700 aaKnown RBP18.27■□□□□ 0.51
GCFC2-201ENST00000321027 ZSCAN23Q3MJ62 389 aa18.27■□□□□ 0.51
GCFC2-201ENST00000321027 SPATA32Q96LK8 384 aa18.27■□□□□ 0.51
GCFC2-201ENST00000321027 TTC21AQ8NDW8 1320 aa18.27■□□□□ 0.51
GCFC2-201ENST00000321027 KCNA6P17658 529 aa18.26■□□□□ 0.51
GCFC2-201ENST00000321027 PDE1AP54750 535 aa18.26■□□□□ 0.51
GCFC2-201ENST00000321027 PTPRTO14522 1441 aa18.26■□□□□ 0.51
GCFC2-201ENST00000321027 ERICH2A1L162 156 aa18.26■□□□□ 0.51
GCFC2-201ENST00000321027 ZBTB7BO15156 539 aaPredicted RBP18.26■□□□□ 0.51
GCFC2-201ENST00000321027 MTERF4Q7Z6M4 381 aaKnown RBP18.26■□□□□ 0.51
GCFC2-201ENST00000321027 CLCN1P35523 988 aa18.26■□□□□ 0.51
GCFC2-201ENST00000321027 ZGPATQ8N5A5 531 aaKnown RBP18.26■□□□□ 0.51
GCFC2-201ENST00000321027 HOOK1Q9UJC3 728 aaKnown RBP18.26■□□□□ 0.51
GCFC2-201ENST00000321027 CCDC8Q9H0W5 538 aaPredicted RBP18.25■□□□□ 0.51
GCFC2-201ENST00000321027 NUP62CLQ9H1M0 184 aa18.25■□□□□ 0.51
GCFC2-201ENST00000321027 ME1P48163 572 aa18.25■□□□□ 0.51
GCFC2-201ENST00000321027 CHD1O14646 1710 aa18.25■□□□□ 0.51
GCFC2-201ENST00000321027 RAB3GAP1Q15042 981 aa18.25■□□□□ 0.51
GCFC2-201ENST00000321027 MNS1Q8NEH6 495 aa18.25■□□□□ 0.51
GCFC2-201ENST00000321027 NOL10Q9BSC4 688 aaKnown RBP18.25■□□□□ 0.51
GCFC2-201ENST00000321027 ANKRD1Q15327 319 aa18.24■□□□□ 0.51
GCFC2-201ENST00000321027 PPP1R42Q7Z4L9 355 aa18.24■□□□□ 0.51
GCFC2-201ENST00000321027 PLEKHM2Q8IWE5 1019 aa18.24■□□□□ 0.51
GCFC2-201ENST00000321027 OTUD7AQ8TE49 926 aaPredicted RBP18.24■□□□□ 0.51
GCFC2-201ENST00000321027 ZSCAN31Q96LW9 406 aaPredicted RBP18.24■□□□□ 0.51
GCFC2-201ENST00000321027 DCTPP1Q9H773 170 aa18.24■□□□□ 0.51
GCFC2-201ENST00000321027 NEO1Q92859 1461 aa18.24■□□□□ 0.51
GCFC2-201ENST00000321027 PLA2R1Q13018 1463 aa18.24■□□□□ 0.51
GCFC2-201ENST00000321027 RAB11FIP3O75154 756 aa18.24■□□□□ 0.51
GCFC2-201ENST00000321027 SMC2O95347 1197 aa18.24■□□□□ 0.51
GCFC2-201ENST00000321027 KIF6Q6ZMV9 814 aa18.24■□□□□ 0.51
GCFC2-201ENST00000321027 NAT10Q9H0A0 1025 aaKnown RBP18.23■□□□□ 0.51
GCFC2-201ENST00000321027 RRAGDQ9NQL2 400 aaPredicted RBP18.23■□□□□ 0.51
GCFC2-201ENST00000321027 NUTM2BA6NNL0 878 aaPredicted RBP18.23■□□□□ 0.51
GCFC2-201ENST00000321027 NUTM2EB1AL46 878 aaPredicted RBP18.23■□□□□ 0.51
GCFC2-201ENST00000321027 STK38Q15208 465 aa18.23■□□□□ 0.51
GCFC2-201ENST00000321027 CCDC70Q6NSX1 233 aa18.23■□□□□ 0.51
GCFC2-201ENST00000321027 NUTM2AQ8IVF1 878 aaPredicted RBP18.23■□□□□ 0.51
GCFC2-201ENST00000321027 AMOTL1Q8IY63 956 aa18.23■□□□□ 0.51
GCFC2-201ENST00000321027 DNAAF4Q8WXU2 420 aa18.23■□□□□ 0.51
GCFC2-201ENST00000321027 LIMCH1Q9UPQ0 1083 aa18.23■□□□□ 0.51
GCFC2-201ENST00000321027 FILIP1Q7Z7B0 1213 aa18.23■□□□□ 0.51
GCFC2-201ENST00000321027 MTMR7Q9Y216 660 aa18.23■□□□□ 0.51
GCFC2-201ENST00000321027 KDM5CP41229 1560 aa18.23■□□□□ 0.51
GCFC2-201ENST00000321027 CCDC47Q96A33 483 aaKnown RBP18.22■□□□□ 0.51
GCFC2-201ENST00000321027 PI4KAP2A4QPH2 592 aa18.22■□□□□ 0.51
GCFC2-201ENST00000321027 CHRNA2Q15822 529 aa18.22■□□□□ 0.51
GCFC2-201ENST00000321027 PI4KAP1Q8N8J0 262 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms