RNA–Protein interactions for RNA: ENST00000319406.8

LCLAT1-202, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2 BASIC

Gene LCLAT1, Length 2,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-202ENST00000319406 PHRF1Q9P1Y6 1649 aaKnown RBP12.52□□□□□ -0.41
LCLAT1-202ENST00000319406 LTN1O94822 1766 aa12.52□□□□□ -0.41
LCLAT1-202ENST00000319406 CD2BP2O95400 341 aaKnown RBP12.52□□□□□ -0.41
LCLAT1-202ENST00000319406 GSPT1P15170 499 aaKnown RBP12.52□□□□□ -0.41
LCLAT1-202ENST00000319406 PLEKHM2Q8IWE5 1019 aa12.52□□□□□ -0.41
LCLAT1-202ENST00000319406 RPAP2Q8IXW5 612 aaPredicted RBP12.52□□□□□ -0.41
LCLAT1-202ENST00000319406 TSPYL4Q9UJ04 414 aa12.52□□□□□ -0.41
LCLAT1-202ENST00000319406 N4BP2Q86UW6 1770 aaPredicted RBP12.51□□□□□ -0.41
LCLAT1-202ENST00000319406 MED1Q15648 1581 aaPredicted RBP12.51□□□□□ -0.41
LCLAT1-202ENST00000319406 ADAMTSL3P82987 1691 aa12.51□□□□□ -0.41
LCLAT1-202ENST00000319406 SLC4A2P04920 1241 aa12.51□□□□□ -0.41
LCLAT1-202ENST00000319406 XPCQ01831 940 aaPredicted RBP12.51□□□□□ -0.41
LCLAT1-202ENST00000319406 TBC1D9Q6ZT07 1266 aa12.51□□□□□ -0.41
LCLAT1-202ENST00000319406 G2E3Q7L622 706 aa12.51□□□□□ -0.41
LCLAT1-202ENST00000319406 RTF1Q92541 710 aaKnown RBP12.51□□□□□ -0.41
LCLAT1-202ENST00000319406 MAP7D2Q96T17 732 aa12.51□□□□□ -0.41
LCLAT1-202ENST00000319406 MEIS3Q99687 375 aa12.51□□□□□ -0.41
LCLAT1-202ENST00000319406 CIZ1Q9ULV3 898 aaPredicted RBP12.51□□□□□ -0.41
LCLAT1-202ENST00000319406 ADGRL3Q9HAR2 1447 aa12.5□□□□□ -0.41
LCLAT1-202ENST00000319406 UQCRHLA0A096LP55 91 aa12.5□□□□□ -0.41
LCLAT1-202ENST00000319406 UQCRHP07919 91 aa12.5□□□□□ -0.41
LCLAT1-202ENST00000319406 SMAP1Q8IYB5 467 aaPredicted RBP12.5□□□□□ -0.41
LCLAT1-202ENST00000319406 SSFA2P28290 1259 aa12.49□□□□□ -0.41
LCLAT1-202ENST00000319406 ABTB2Q8N961 1025 aa12.49□□□□□ -0.41
LCLAT1-202ENST00000319406 PRDM10Q9NQV6 1147 aa12.49□□□□□ -0.41
LCLAT1-202ENST00000319406 MAP3K5Q99683 1374 aa12.49□□□□□ -0.41
LCLAT1-202ENST00000319406 IL17REQ8NFR9 667 aa12.49□□□□□ -0.41
LCLAT1-202ENST00000319406 ZHX1Q9UKY1 873 aaPredicted RBP12.49□□□□□ -0.41
LCLAT1-202ENST00000319406 PHF8Q9UPP1 1060 aa12.49□□□□□ -0.41
LCLAT1-202ENST00000319406 CACNA1FO60840 1977 aa12.49□□□□□ -0.41
LCLAT1-202ENST00000319406 GNAT3A8MTJ3 354 aa12.48□□□□□ -0.41
LCLAT1-202ENST00000319406 ZNF500O60304 480 aaPredicted RBP12.48□□□□□ -0.41
LCLAT1-202ENST00000319406 HSP90AB1P08238 724 aaKnown RBP12.48□□□□□ -0.41
LCLAT1-202ENST00000319406 NUTM2GQ5VZR2 741 aa12.48□□□□□ -0.41
LCLAT1-202ENST00000319406 BABAM1Q9NWV8 329 aa12.48□□□□□ -0.41
LCLAT1-202ENST00000319406 NOL7Q9UMY1 257 aaKnown RBP12.48□□□□□ -0.41
LCLAT1-202ENST00000319406 CEMIPQ8WUJ3 1361 aa12.48□□□□□ -0.41
LCLAT1-202ENST00000319406 SOS1Q07889 1333 aaPredicted RBP12.48□□□□□ -0.41
LCLAT1-202ENST00000319406 TTC22Q5TAA0 569 aa12.47□□□□□ -0.41
LCLAT1-202ENST00000319406 ANKLE2Q86XL3 938 aa12.47□□□□□ -0.41
LCLAT1-202ENST00000319406 CDC45O75419 566 aa12.47□□□□□ -0.41
LCLAT1-202ENST00000319406 KLHL40Q2TBA0 621 aa12.47□□□□□ -0.41
LCLAT1-202ENST00000319406 DDX49Q9Y6V7 483 aaKnown RBP12.47□□□□□ -0.41
LCLAT1-202ENST00000319406 NCAPD2Q15021 1401 aa12.46□□□□□ -0.41
LCLAT1-202ENST00000319406 F6X3S4 739 aa12.46□□□□□ -0.41
LCLAT1-202ENST00000319406 CCT4P50991 539 aaKnown RBP12.46□□□□□ -0.41
LCLAT1-202ENST00000319406 C16orf71Q8IYS4 520 aaPredicted RBP12.46□□□□□ -0.41
LCLAT1-202ENST00000319406 OTUD7AQ8TE49 926 aaPredicted RBP12.46□□□□□ -0.41
LCLAT1-202ENST00000319406 IP6K1Q92551 441 aa12.46□□□□□ -0.41
LCLAT1-202ENST00000319406 PXDNLA1KZ92 1463 aa12.46□□□□□ -0.41
LCLAT1-202ENST00000319406 IBTKQ9P2D0 1353 aaPredicted RBP12.46□□□□□ -0.42
LCLAT1-202ENST00000319406 HS1BP3Q53T59 392 aa12.46□□□□□ -0.42
LCLAT1-202ENST00000319406 ANP32BQ92688 251 aaKnown RBP12.46□□□□□ -0.42
LCLAT1-202ENST00000319406 PDLIM2Q96JY6 352 aa12.46□□□□□ -0.42
LCLAT1-202ENST00000319406 RBM42Q9BTD8 480 aaKnown RBP12.46□□□□□ -0.42
LCLAT1-202ENST00000319406 RBSNQ9H1K0 784 aa12.46□□□□□ -0.42
LCLAT1-202ENST00000319406 SLIT3O75094 1523 aa12.45□□□□□ -0.42
LCLAT1-202ENST00000319406 SETD1BQ9UPS6 1966 aaKnown RBP12.45□□□□□ -0.42
LCLAT1-202ENST00000319406 KDM3BQ7LBC6 1761 aa12.45□□□□□ -0.42
LCLAT1-202ENST00000319406 TUBGCP6Q96RT7 1819 aa12.45□□□□□ -0.42
LCLAT1-202ENST00000319406 BAG4O95429 457 aaKnown RBP12.45□□□□□ -0.42
LCLAT1-202ENST00000319406 PTMSP20962 102 aa12.44□□□□□ -0.42
LCLAT1-202ENST00000319406 ZNF445P59923 1031 aa12.44□□□□□ -0.42
LCLAT1-202ENST00000319406 FGD1P98174 961 aa12.44□□□□□ -0.42
LCLAT1-202ENST00000319406 FLIIQ13045 1269 aa12.44□□□□□ -0.42
LCLAT1-202ENST00000319406 CLEC17AQ6ZS10 378 aa12.44□□□□□ -0.42
LCLAT1-202ENST00000319406 LMO7Q8WWI1 1683 aa12.44□□□□□ -0.42
LCLAT1-202ENST00000319406 RGPD2P0DJD1 1756 aa12.44□□□□□ -0.42
LCLAT1-202ENST00000319406 DYNC1I1O14576 645 aa12.44□□□□□ -0.42
LCLAT1-202ENST00000319406 SALL3Q9BXA9 1300 aa12.44□□□□□ -0.42
LCLAT1-202ENST00000319406 CAMTA1Q9Y6Y1 1673 aa12.44□□□□□ -0.42
LCLAT1-202ENST00000319406 TAF7Q15545 349 aaPredicted RBP12.43□□□□□ -0.42
LCLAT1-202ENST00000319406 CCDC30Q5VVM6 783 aa12.43□□□□□ -0.42
LCLAT1-202ENST00000319406 NBPF6Q5VWK0 638 aa12.43□□□□□ -0.42
LCLAT1-202ENST00000319406 RBM33Q96EV2 1170 aaKnown RBP12.43□□□□□ -0.42
LCLAT1-202ENST00000319406 NBPF4Q96M43 638 aa12.43□□□□□ -0.42
LCLAT1-202ENST00000319406 OSBPL3Q9H4L5 887 aa12.43□□□□□ -0.42
LCLAT1-202ENST00000319406 NPHP4O75161 1426 aaPredicted RBP12.43□□□□□ -0.42
LCLAT1-202ENST00000319406 TRPM3Q9HCF6 1732 aaPredicted RBP12.43□□□□□ -0.42
LCLAT1-202ENST00000319406 SMARCA5O60264 1052 aaPredicted RBP12.42□□□□□ -0.42
LCLAT1-202ENST00000319406 ZSCAN20P17040 1043 aaPredicted RBP12.42□□□□□ -0.42
LCLAT1-202ENST00000319406 ZSCAN23Q3MJ62 389 aa12.42□□□□□ -0.42
LCLAT1-202ENST00000319406 USHBP1Q8N6Y0 703 aa12.42□□□□□ -0.42
LCLAT1-202ENST00000319406 JARID2Q92833 1246 aaPredicted RBP12.42□□□□□ -0.42
LCLAT1-202ENST00000319406 K7ELQ4 463 aaPredicted RBP12.42□□□□□ -0.42
LCLAT1-202ENST00000319406 PRIM1P49642 420 aaKnown RBP12.42□□□□□ -0.42
LCLAT1-202ENST00000319406 CAVIN1Q6NZI2 390 aaKnown RBP12.42□□□□□ -0.42
LCLAT1-202ENST00000319406 LTV1Q96GA3 475 aaPredicted RBP12.42□□□□□ -0.42
LCLAT1-202ENST00000319406 STK31Q9BXU1 1019 aa12.42□□□□□ -0.42
LCLAT1-202ENST00000319406 ZKSCAN5Q9Y2L8 839 aa12.42□□□□□ -0.42
LCLAT1-202ENST00000319406 DMTNQ08495 405 aa12.41□□□□□ -0.42
LCLAT1-202ENST00000319406 SDSP20132 328 aa12.41□□□□□ -0.42
LCLAT1-202ENST00000319406 TRHP20396 242 aaPredicted RBP12.41□□□□□ -0.42
LCLAT1-202ENST00000319406 SLC4A10Q6U841 1118 aa12.41□□□□□ -0.42
LCLAT1-202ENST00000319406 MST1RQ04912 1400 aa12.41□□□□□ -0.42
LCLAT1-202ENST00000319406 HMMRO75330 724 aa12.41□□□□□ -0.42
LCLAT1-202ENST00000319406 GNAI2P04899 355 aa12.41□□□□□ -0.42
LCLAT1-202ENST00000319406 MTERF4Q7Z6M4 381 aaKnown RBP12.4□□□□□ -0.42
LCLAT1-202ENST00000319406 KCNH5Q8NCM2 988 aa12.4□□□□□ -0.42
LCLAT1-202ENST00000319406 USP26Q9BXU7 913 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms