RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 CCDC146Q8IYE0 955 aa22.04■■□□□ 1.12
LRRC42-201ENST00000319223 MRC1P22897 1456 aa22.04■■□□□ 1.12
LRRC42-201ENST00000319223 DCTN1Q14203 1278 aa22.03■■□□□ 1.12
LRRC42-201ENST00000319223 ZNF827Q17R98 1081 aa22.03■■□□□ 1.12
LRRC42-201ENST00000319223 MCM10Q7L590 875 aa22.03■■□□□ 1.12
LRRC42-201ENST00000319223 LOC102724428A0A0B4J2F2 783 aa22.02■■□□□ 1.12
LRRC42-201ENST00000319223 SIK1P57059 783 aa22.02■■□□□ 1.12
LRRC42-201ENST00000319223 SLC4A9Q96Q91 983 aa22.02■■□□□ 1.12
LRRC42-201ENST00000319223 PNNQ9H307 717 aaKnown RBP22.02■■□□□ 1.12
LRRC42-201ENST00000319223 NEFMP07197 916 aa22.01■■□□□ 1.11
LRRC42-201ENST00000319223 SLC39A6Q13433 755 aa22.01■■□□□ 1.11
LRRC42-201ENST00000319223 SLC15A2Q16348 729 aa22.01■■□□□ 1.11
LRRC42-201ENST00000319223 CEMIPQ8WUJ3 1361 aa22.01■■□□□ 1.11
LRRC42-201ENST00000319223 MAPK8IP3Q9UPT6 1336 aa22.01■■□□□ 1.11
LRRC42-201ENST00000319223 NFE2L2Q16236 605 aa22■■□□□ 1.11
LRRC42-201ENST00000319223 PDGFDQ9GZP0 370 aaPredicted RBP22■■□□□ 1.11
LRRC42-201ENST00000319223 ITPK1Q13572 414 aa22■■□□□ 1.11
LRRC42-201ENST00000319223 AKT1S1Q96B36 256 aa22■■□□□ 1.11
LRRC42-201ENST00000319223 STK32BQ9NY57 414 aa22■■□□□ 1.11
LRRC42-201ENST00000319223 DLG5Q8TDM6 1919 aa21.99■■□□□ 1.11
LRRC42-201ENST00000319223 RBM42Q9BTD8 480 aaKnown RBP21.99■■□□□ 1.11
LRRC42-201ENST00000319223 MRS2Q9HD23 443 aa21.99■■□□□ 1.11
LRRC42-201ENST00000319223 PTCD1O75127 700 aaKnown RBP21.98■■□□□ 1.11
LRRC42-201ENST00000319223 ATP6V1AP38606 617 aa21.97■■□□□ 1.11
LRRC42-201ENST00000319223 TEFQ10587 303 aa21.97■■□□□ 1.11
LRRC42-201ENST00000319223 RTF1Q92541 710 aaKnown RBP21.97■■□□□ 1.11
LRRC42-201ENST00000319223 RUNDC1Q96C34 613 aa21.97■■□□□ 1.11
LRRC42-201ENST00000319223 TMPOP42166 694 aaKnown RBP21.97■■□□□ 1.11
LRRC42-201ENST00000319223 PNISRQ8TF01 805 aaKnown RBP21.97■■□□□ 1.11
LRRC42-201ENST00000319223 RRP7AQ9Y3A4 280 aaKnown RBP21.97■■□□□ 1.11
LRRC42-201ENST00000319223 TAF1LQ8IZX4 1826 aa21.96■■□□□ 1.11
LRRC42-201ENST00000319223 HTATSF1O43719 755 aaKnown RBP21.96■■□□□ 1.11
LRRC42-201ENST00000319223 LINC00116Q8NCU8 138 aa21.96■■□□□ 1.11
LRRC42-201ENST00000319223 THUMPD2Q9BTF0 503 aaKnown RBP21.96■■□□□ 1.11
LRRC42-201ENST00000319223 SIPA1L3O60292 1781 aaPredicted RBP21.95■■□□□ 1.1
LRRC42-201ENST00000319223 C5P01031 1676 aa21.95■■□□□ 1.1
LRRC42-201ENST00000319223 RIPK4P57078 832 aa21.94■■□□□ 1.1
LRRC42-201ENST00000319223 NEUROD2Q15784 382 aa21.94■■□□□ 1.1
LRRC42-201ENST00000319223 KCNQ3O43525 872 aa21.93■■□□□ 1.1
LRRC42-201ENST00000319223 SMIM5Q71RC9 77 aa21.92■■□□□ 1.1
LRRC42-201ENST00000319223 AMIGO3Q86WK7 504 aa21.92■■□□□ 1.1
LRRC42-201ENST00000319223 KCPQ6ZWJ8 1503 aa21.92■■□□□ 1.1
LRRC42-201ENST00000319223 TFCP2L1Q9NZI6 479 aa21.92■■□□□ 1.1
LRRC42-201ENST00000319223 C4BP0C0L5 1744 aa21.91■■□□□ 1.1
LRRC42-201ENST00000319223 TUBGCP6Q96RT7 1819 aa21.91■■□□□ 1.1
LRRC42-201ENST00000319223 BTBD11A6QL63 1104 aa21.91■■□□□ 1.1
LRRC42-201ENST00000319223 ZNF790Q6PG37 636 aa21.91■■□□□ 1.1
LRRC42-201ENST00000319223 PNPLA7Q6ZV29 1317 aa21.91■■□□□ 1.1
LRRC42-201ENST00000319223 CASZ1Q86V15 1759 aa21.9■■□□□ 1.1
LRRC42-201ENST00000319223 MIS18AQ9NYP9 233 aa21.9■■□□□ 1.1
LRRC42-201ENST00000319223 ZNF831Q5JPB2 1677 aa21.9■■□□□ 1.1
LRRC42-201ENST00000319223 SENP3-EIF4A1A0A087X0R7 540 aa21.89■■□□□ 1.1
LRRC42-201ENST00000319223 APAF1O14727 1248 aa21.89■■□□□ 1.09
LRRC42-201ENST00000319223 DNAJC10Q8IXB1 793 aa21.89■■□□□ 1.09
LRRC42-201ENST00000319223 ZNF496Q96IT1 587 aaPredicted RBP21.89■■□□□ 1.09
LRRC42-201ENST00000319223 TRIM35Q9UPQ4 493 aa21.89■■□□□ 1.09
LRRC42-201ENST00000319223 TJP1Q07157 1748 aa21.88■■□□□ 1.09
LRRC42-201ENST00000319223 UBR2Q8IWV8 1755 aa21.88■■□□□ 1.09
LRRC42-201ENST00000319223 TAF7Q15545 349 aaPredicted RBP21.88■■□□□ 1.09
LRRC42-201ENST00000319223 TTC5Q8N0Z6 440 aa21.88■■□□□ 1.09
LRRC42-201ENST00000319223 AK7Q96M32 723 aa21.87■■□□□ 1.09
LRRC42-201ENST00000319223 COL5A3P25940 1745 aaPredicted RBP21.86■■□□□ 1.09
LRRC42-201ENST00000319223 DIEXFQ68CQ4 756 aaKnown RBP21.86■■□□□ 1.09
LRRC42-201ENST00000319223 SRCAPQ6ZRS2 3230 aa21.86■■□□□ 1.09
LRRC42-201ENST00000319223 COL23A1Q86Y22 540 aaPredicted RBP21.86■■□□□ 1.09
LRRC42-201ENST00000319223 ZBTB7AO95365 584 aa21.86■■□□□ 1.09
LRRC42-201ENST00000319223 QSER1Q2KHR3 1735 aa21.85■■□□□ 1.09
LRRC42-201ENST00000319223 FAM9BQ8IZU0 186 aa21.84■■□□□ 1.09
LRRC42-201ENST00000319223 MYH14Q7Z406 1995 aaKnown RBP21.83■■□□□ 1.09
LRRC42-201ENST00000319223 CICQ96RK0 1608 aaPredicted RBP21.83■■□□□ 1.09
LRRC42-201ENST00000319223 GNPATO15228 680 aa21.83■■□□□ 1.09
LRRC42-201ENST00000319223 PHF14O94880 888 aa21.83■■□□□ 1.09
LRRC42-201ENST00000319223 UBR3Q6ZT12 1888 aa21.83■■□□□ 1.09
LRRC42-201ENST00000319223 HEG1Q9ULI3 1381 aa21.83■■□□□ 1.09
LRRC42-201ENST00000319223 CNTNAP4Q9C0A0 1308 aa21.83■■□□□ 1.08
LRRC42-201ENST00000319223 CRKLP46109 303 aaKnown RBP21.83■■□□□ 1.08
LRRC42-201ENST00000319223 LMOD3Q0VAK6 560 aa21.83■■□□□ 1.08
LRRC42-201ENST00000319223 VSIG10Q8N0Z9 540 aa21.83■■□□□ 1.08
LRRC42-201ENST00000319223 ATF5Q9Y2D1 282 aaPredicted RBP21.83■■□□□ 1.08
LRRC42-201ENST00000319223 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.82■■□□□ 1.08
LRRC42-201ENST00000319223 PRAMEF22A3QJZ6 481 aa21.82■■□□□ 1.08
LRRC42-201ENST00000319223 CYP19A1P11511 503 aaPredicted RBP21.82■■□□□ 1.08
LRRC42-201ENST00000319223 HMGB2P26583 209 aaKnown RBP21.82■■□□□ 1.08
LRRC42-201ENST00000319223 RC3H1Q5TC82 1133 aaKnown RBP21.82■■□□□ 1.08
LRRC42-201ENST00000319223 INTS5Q6P9B9 1019 aaKnown RBP21.82■■□□□ 1.08
LRRC42-201ENST00000319223 FMNL2Q96PY5 1086 aa21.82■■□□□ 1.08
LRRC42-201ENST00000319223 MSH5O43196 834 aa21.81■■□□□ 1.08
LRRC42-201ENST00000319223 RPS6KA4O75676 772 aa21.79■■□□□ 1.08
LRRC42-201ENST00000319223 SPON1Q9HCB6 807 aa21.79■■□□□ 1.08
LRRC42-201ENST00000319223 KDM3BQ7LBC6 1761 aa21.79■■□□□ 1.08
LRRC42-201ENST00000319223 SSFA2P28290 1259 aa21.78■■□□□ 1.08
LRRC42-201ENST00000319223 MIER1Q8N108 512 aa21.78■■□□□ 1.08
LRRC42-201ENST00000319223 RTCBQ9Y3I0 505 aaKnown RBP21.78■■□□□ 1.08
LRRC42-201ENST00000319223 LRP5O75197 1615 aa21.78■■□□□ 1.08
LRRC42-201ENST00000319223 MTFR1LQ9H019 292 aa21.77■■□□□ 1.08
LRRC42-201ENST00000319223 CCDC87Q9NVE4 849 aa21.77■■□□□ 1.08
LRRC42-201ENST00000319223 USP16Q9Y5T5 823 aa21.77■■□□□ 1.08
LRRC42-201ENST00000319223 PTGER2P43116 358 aa21.77■■□□□ 1.08
LRRC42-201ENST00000319223 FLAD1Q8NFF5 587 aa21.77■■□□□ 1.08
LRRC42-201ENST00000319223 SLC16A10Q8TF71 515 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms