RNA–Protein interactions for RNA: ENST00000317668.8

PROM2-202, Transcript of prominin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PROM2, Length 3,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-202ENST00000317668 PLEKHF1Q96S99 279 aa12.72□□□□□ -0.37
PROM2-202ENST00000317668 ISY1Q9ULR0 285 aaKnown RBP12.72□□□□□ -0.37
PROM2-202ENST00000317668 NPHP3Q7Z494 1330 aa12.72□□□□□ -0.37
PROM2-202ENST00000317668 DDIT3P35638 169 aa12.72□□□□□ -0.37
PROM2-202ENST00000317668 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.72□□□□□ -0.37
PROM2-202ENST00000317668 EFCAB6Q5THR3 1501 aa12.72□□□□□ -0.37
PROM2-202ENST00000317668 SRGAP3O43295 1099 aa12.71□□□□□ -0.37
PROM2-202ENST00000317668 TOM1O60784 492 aa12.71□□□□□ -0.37
PROM2-202ENST00000317668 CABP4P57796 275 aa12.71□□□□□ -0.37
PROM2-202ENST00000317668 ZRSR1Q15695 479 aaKnown RBP12.71□□□□□ -0.37
PROM2-202ENST00000317668 TSC1Q92574 1164 aa12.71□□□□□ -0.37
PROM2-202ENST00000317668 NEUROD6Q96NK8 337 aa12.71□□□□□ -0.37
PROM2-202ENST00000317668 GCC1Q96CN9 775 aa12.71□□□□□ -0.37
PROM2-202ENST00000317668 ABCC11Q96J66 1382 aa12.71□□□□□ -0.37
PROM2-202ENST00000317668 KIDINS220Q9ULH0 1771 aa12.71□□□□□ -0.38
PROM2-202ENST00000317668 SLC39A6Q13433 755 aa12.71□□□□□ -0.38
PROM2-202ENST00000317668 RIC3Q7Z5B4 369 aa12.71□□□□□ -0.38
PROM2-202ENST00000317668 ZNF830Q96NB3 372 aaPredicted RBP12.71□□□□□ -0.38
PROM2-202ENST00000317668 EYA1Q99502 592 aa12.71□□□□□ -0.38
PROM2-202ENST00000317668 CT47B1P0C2W7 299 aaPredicted RBP12.7□□□□□ -0.38
PROM2-202ENST00000317668 CWC27Q6UX04 472 aaKnown RBP12.7□□□□□ -0.38
PROM2-202ENST00000317668 PDCL3Q9H2J4 239 aa12.7□□□□□ -0.38
PROM2-202ENST00000317668 NSFL1CQ9UNZ2 370 aaKnown RBP12.7□□□□□ -0.38
PROM2-202ENST00000317668 GNAI2P04899 355 aa12.7□□□□□ -0.38
PROM2-202ENST00000317668 TAF7LQ5H9L4 462 aa12.7□□□□□ -0.38
PROM2-202ENST00000317668 ARAP3Q8WWN8 1544 aa12.7□□□□□ -0.38
PROM2-202ENST00000317668 AK9Q5TCS8 1911 aa12.7□□□□□ -0.38
PROM2-202ENST00000317668 STK3Q13188 491 aa12.7□□□□□ -0.38
PROM2-202ENST00000317668 DIP2CQ9Y2E4 1556 aa12.7□□□□□ -0.38
PROM2-202ENST00000317668 BTBD11A6QL63 1104 aa12.69□□□□□ -0.38
PROM2-202ENST00000317668 FIBPO43427 364 aa12.69□□□□□ -0.38
PROM2-202ENST00000317668 OFD1O75665 1012 aa12.69□□□□□ -0.38
PROM2-202ENST00000317668 VAMP4O75379 141 aa12.69□□□□□ -0.38
PROM2-202ENST00000317668 NUCB2P80303 420 aa12.69□□□□□ -0.38
PROM2-202ENST00000317668 TOMM22Q9NS69 142 aa12.69□□□□□ -0.38
PROM2-202ENST00000317668 CEP152O94986 1710 aa12.69□□□□□ -0.38
PROM2-202ENST00000317668 PTMSP20962 102 aa12.69□□□□□ -0.38
PROM2-202ENST00000317668 CEBPZQ03701 1054 aaKnown RBP12.69□□□□□ -0.38
PROM2-202ENST00000317668 RABEP1Q15276 862 aa12.69□□□□□ -0.38
PROM2-202ENST00000317668 G2E3Q7L622 706 aa12.69□□□□□ -0.38
PROM2-202ENST00000317668 STK11IPQ8N1F8 1099 aa12.69□□□□□ -0.38
PROM2-202ENST00000317668 ACSBG1Q96GR2 724 aa12.69□□□□□ -0.38
PROM2-202ENST00000317668 LRRFIP2Q9Y608 721 aaKnown RBP12.69□□□□□ -0.38
PROM2-202ENST00000317668 A2ML1A8K2U0 1454 aa12.69□□□□□ -0.38
PROM2-202ENST00000317668 ABCA6Q8N139 1617 aa12.68□□□□□ -0.38
PROM2-202ENST00000317668 GNAT3A8MTJ3 354 aa12.68□□□□□ -0.38
PROM2-202ENST00000317668 CCDC30Q5VVM6 783 aa12.68□□□□□ -0.38
PROM2-202ENST00000317668 PLEKHM2Q8IWE5 1019 aa12.68□□□□□ -0.38
PROM2-202ENST00000317668 LMBRD1Q9NUN5 540 aa12.68□□□□□ -0.38
PROM2-202ENST00000317668 SETD1BQ9UPS6 1966 aaKnown RBP12.68□□□□□ -0.38
PROM2-202ENST00000317668 TET3O43151 1660 aa12.68□□□□□ -0.38
PROM2-202ENST00000317668 MRPL50Q8N5N7 158 aaKnown RBP12.68□□□□□ -0.38
PROM2-202ENST00000317668 MYOM1P52179 1685 aa12.67□□□□□ -0.38
PROM2-202ENST00000317668 TAF7Q15545 349 aaPredicted RBP12.67□□□□□ -0.38
PROM2-202ENST00000317668 GPT2Q8TD30 523 aa12.67□□□□□ -0.38
PROM2-202ENST00000317668 SDSP20132 328 aa12.67□□□□□ -0.38
PROM2-202ENST00000317668 FERMT3Q86UX7 667 aa12.67□□□□□ -0.38
PROM2-202ENST00000317668 DNAJC2Q99543 621 aaKnown RBP12.67□□□□□ -0.38
PROM2-202ENST00000317668 BTG4Q9NY30 223 aa12.67□□□□□ -0.38
PROM2-202ENST00000317668 C17orf53Q8N3J3 647 aaPredicted RBP12.67□□□□□ -0.38
PROM2-202ENST00000317668 TMEM63CQ9P1W3 806 aa12.67□□□□□ -0.38
PROM2-202ENST00000317668 G3BP1Q13283 466 aaKnown RBP eCLIP12.66□□□□□ -0.38
PROM2-202ENST00000317668 MTHFSDQ2M296 383 aaKnown RBP12.66□□□□□ -0.38
PROM2-202ENST00000317668 CHMP4CQ96CF2 233 aa12.66□□□□□ -0.38
PROM2-202ENST00000317668 TCEANC2Q96MN5 208 aa12.66□□□□□ -0.38
PROM2-202ENST00000317668 CFAP44Q96MT7 982 aa12.66□□□□□ -0.38
PROM2-202ENST00000317668 PPP1R9BQ96SB3 815 aa12.66□□□□□ -0.38
PROM2-202ENST00000317668 LRRCC1Q9C099 1032 aa12.66□□□□□ -0.38
PROM2-202ENST00000317668 MAP3K4Q9Y6R4 1608 aa12.66□□□□□ -0.38
PROM2-202ENST00000317668 SPG7Q9UQ90 795 aa12.66□□□□□ -0.38
PROM2-202ENST00000317668 IQSEC2Q5JU85 1478 aa12.65□□□□□ -0.38
PROM2-202ENST00000317668 ZHX1Q9UKY1 873 aaPredicted RBP12.65□□□□□ -0.38
PROM2-202ENST00000317668 HOXC9P31274 260 aa12.65□□□□□ -0.38
PROM2-202ENST00000317668 ALDH1L2Q3SY69 923 aa12.65□□□□□ -0.38
PROM2-202ENST00000317668 USP26Q9BXU7 913 aa12.65□□□□□ -0.38
PROM2-202ENST00000317668 VIRMAQ69YN4 1812 aaKnown RBP12.65□□□□□ -0.38
PROM2-202ENST00000317668 KLHL34Q8N239 644 aa12.65□□□□□ -0.38
PROM2-202ENST00000317668 NPHP4O75161 1426 aaPredicted RBP12.65□□□□□ -0.39
PROM2-202ENST00000317668 NEXNQ0ZGT2 675 aa12.64□□□□□ -0.39
PROM2-202ENST00000317668 TTC22Q5TAA0 569 aa12.64□□□□□ -0.39
PROM2-202ENST00000317668 CLASRPQ8N2M8 674 aaKnown RBP12.64□□□□□ -0.39
PROM2-202ENST00000317668 GPATCH3Q96I76 525 aa12.64□□□□□ -0.39
PROM2-202ENST00000317668 SRCIN1Q9C0H9 1055 aa12.64□□□□□ -0.39
PROM2-202ENST00000317668 IFT57Q9NWB7 429 aa12.64□□□□□ -0.39
PROM2-202ENST00000317668 KIF1BO60333 1816 aa12.64□□□□□ -0.39
PROM2-202ENST00000317668 GNAI3P08754 354 aa12.64□□□□□ -0.39
PROM2-202ENST00000317668 NBPF6Q5VWK0 638 aa12.64□□□□□ -0.39
PROM2-202ENST00000317668 NBPF4Q96M43 638 aa12.64□□□□□ -0.39
PROM2-202ENST00000317668 KDM4FA0A1W2PPD8 638 aa12.64□□□□□ -0.39
PROM2-202ENST00000317668 ERC2O15083 957 aa12.64□□□□□ -0.39
PROM2-202ENST00000317668 CCDC8Q9H0W5 538 aaPredicted RBP12.64□□□□□ -0.39
PROM2-202ENST00000317668 SMC3Q9UQE7 1217 aa12.64□□□□□ -0.39
PROM2-202ENST00000317668 PLEKHG1Q9ULL1 1385 aa12.64□□□□□ -0.39
PROM2-202ENST00000317668 FAM182BQ5T319 152 aa12.63□□□□□ -0.39
PROM2-202ENST00000317668 FSD1Q9BTV5 496 aa12.63□□□□□ -0.39
PROM2-202ENST00000317668 NCOA3Q9Y6Q9 1424 aa12.63□□□□□ -0.39
PROM2-202ENST00000317668 FLIIQ13045 1269 aa12.63□□□□□ -0.39
PROM2-202ENST00000317668 MYOM2P54296 1465 aa12.63□□□□□ -0.39
PROM2-202ENST00000317668 PLEKHG3A1L390 1219 aa12.62□□□□□ -0.39
PROM2-202ENST00000317668 GNL2Q13823 731 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms