RNA–Protein interactions for RNA: ENST00000317459.10

TRPT1-201, Transcript of tRNA phosphotransferase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPT1, Length 962 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-201ENST00000317459 MAP3K5Q99683 1374 aa27.31■■□□□ 1.96
TRPT1-201ENST00000317459 GNAT3A8MTJ3 354 aa27.3■■□□□ 1.96
TRPT1-201ENST00000317459 SLC52A2Q9HAB3 445 aa27.3■■□□□ 1.96
TRPT1-201ENST00000317459 C5P01031 1676 aa27.3■■□□□ 1.96
TRPT1-201ENST00000317459 ZBTB7AO95365 584 aa27.29■■□□□ 1.96
TRPT1-201ENST00000317459 RBM42Q9BTD8 480 aaKnown RBP27.29■■□□□ 1.96
TRPT1-201ENST00000317459 PRKRIP1Q9H875 184 aaPredicted RBP27.29■■□□□ 1.96
TRPT1-201ENST00000317459 NEFMP07197 916 aa27.28■■□□□ 1.96
TRPT1-201ENST00000317459 ATP6V1AP38606 617 aa27.28■■□□□ 1.96
TRPT1-201ENST00000317459 SRCAPQ6ZRS2 3230 aa27.28■■□□□ 1.96
TRPT1-201ENST00000317459 MRC1P22897 1456 aa27.25■■□□□ 1.95
TRPT1-201ENST00000317459 PNPLA7Q6ZV29 1317 aa27.25■■□□□ 1.95
TRPT1-201ENST00000317459 AK7Q96M32 723 aa27.25■■□□□ 1.95
TRPT1-201ENST00000317459 TAF1LQ8IZX4 1826 aa27.25■■□□□ 1.95
TRPT1-201ENST00000317459 ADAMTS7Q9UKP4 1686 aa27.24■■□□□ 1.95
TRPT1-201ENST00000317459 ITPK1Q13572 414 aa27.24■■□□□ 1.95
TRPT1-201ENST00000317459 LINC00116Q8NCU8 138 aa27.24■■□□□ 1.95
TRPT1-201ENST00000317459 PNNQ9H307 717 aaKnown RBP27.24■■□□□ 1.95
TRPT1-201ENST00000317459 ATF5Q9Y2D1 282 aaPredicted RBP27.24■■□□□ 1.95
TRPT1-201ENST00000317459 PTCD1O75127 700 aaKnown RBP27.23■■□□□ 1.95
TRPT1-201ENST00000317459 MTFR1LQ9H019 292 aa27.23■■□□□ 1.95
TRPT1-201ENST00000317459 C4BP0C0L5 1744 aa27.23■■□□□ 1.95
TRPT1-201ENST00000317459 QSER1Q2KHR3 1735 aa27.23■■□□□ 1.95
TRPT1-201ENST00000317459 MSH5O43196 834 aa27.22■■□□□ 1.95
TRPT1-201ENST00000317459 TEFQ10587 303 aa27.22■■□□□ 1.95
TRPT1-201ENST00000317459 IL17REQ8NFR9 667 aa27.22■■□□□ 1.95
TRPT1-201ENST00000317459 PPP1R1BQ9UD71 204 aaPredicted RBP27.22■■□□□ 1.95
TRPT1-201ENST00000317459 VIRMAQ69YN4 1812 aaKnown RBP27.22■■□□□ 1.95
TRPT1-201ENST00000317459 TUBGCP6Q96RT7 1819 aa27.21■■□□□ 1.95
TRPT1-201ENST00000317459 RTF1Q92541 710 aaKnown RBP27.21■■□□□ 1.95
TRPT1-201ENST00000317459 SLC4A9Q96Q91 983 aa27.21■■□□□ 1.95
TRPT1-201ENST00000317459 SLC16A10Q8TF71 515 aa27.2■■□□□ 1.94
TRPT1-201ENST00000317459 MAPK8IP3Q9UPT6 1336 aa27.19■■□□□ 1.94
TRPT1-201ENST00000317459 SLC39A6Q13433 755 aa27.19■■□□□ 1.94
TRPT1-201ENST00000317459 FLAD1Q8NFF5 587 aa27.19■■□□□ 1.94
TRPT1-201ENST00000317459 COL23A1Q86Y22 540 aaPredicted RBP27.18■■□□□ 1.94
TRPT1-201ENST00000317459 PLEKHF1Q96S99 279 aa27.18■■□□□ 1.94
TRPT1-201ENST00000317459 ZNF831Q5JPB2 1677 aa27.17■■□□□ 1.94
TRPT1-201ENST00000317459 WDR43Q15061 677 aaKnown RBP eCLIP27.17■■□□□ 1.94
TRPT1-201ENST00000317459 GNPATO15228 680 aa27.16■■□□□ 1.94
TRPT1-201ENST00000317459 PHF14O94880 888 aa27.16■■□□□ 1.94
TRPT1-201ENST00000317459 CEMIPQ8WUJ3 1361 aa27.16■■□□□ 1.94
TRPT1-201ENST00000317459 HTATSF1O43719 755 aaKnown RBP27.15■■□□□ 1.94
TRPT1-201ENST00000317459 PTGER2P43116 358 aa27.15■■□□□ 1.94
TRPT1-201ENST00000317459 TTC5Q8N0Z6 440 aa27.15■■□□□ 1.94
TRPT1-201ENST00000317459 MCM10Q7L590 875 aa27.14■■□□□ 1.94
TRPT1-201ENST00000317459 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.13■■□□□ 1.93
TRPT1-201ENST00000317459 SSFA2P28290 1259 aa27.13■■□□□ 1.93
TRPT1-201ENST00000317459 NFE2L2Q16236 605 aa27.13■■□□□ 1.93
TRPT1-201ENST00000317459 AMIGO3Q86WK7 504 aa27.12■■□□□ 1.93
TRPT1-201ENST00000317459 CNTNAP4Q9C0A0 1308 aa27.12■■□□□ 1.93
TRPT1-201ENST00000317459 DCTN1Q14203 1278 aa27.11■■□□□ 1.93
TRPT1-201ENST00000317459 RC3H1Q5TC82 1133 aaKnown RBP27.11■■□□□ 1.93
TRPT1-201ENST00000317459 SMIM5Q71RC9 77 aa27.11■■□□□ 1.93
TRPT1-201ENST00000317459 KCPQ6ZWJ8 1503 aa27.11■■□□□ 1.93
TRPT1-201ENST00000317459 UBR3Q6ZT12 1888 aa27.1■■□□□ 1.93
TRPT1-201ENST00000317459 BTBD11A6QL63 1104 aa27.1■■□□□ 1.93
TRPT1-201ENST00000317459 POLD1P28340 1107 aa27.1■■□□□ 1.93
TRPT1-201ENST00000317459 SGIP1Q9BQI5 828 aa27.1■■□□□ 1.93
TRPT1-201ENST00000317459 RTCBQ9Y3I0 505 aaKnown RBP27.1■■□□□ 1.93
TRPT1-201ENST00000317459 COL5A3P25940 1745 aaPredicted RBP27.1■■□□□ 1.93
TRPT1-201ENST00000317459 ANP32CO43423 234 aa27.09■■□□□ 1.93
TRPT1-201ENST00000317459 ZNF790Q6PG37 636 aa27.09■■□□□ 1.93
TRPT1-201ENST00000317459 DNAJC10Q8IXB1 793 aa27.09■■□□□ 1.93
TRPT1-201ENST00000317459 SIPA1L3O60292 1781 aaPredicted RBP27.09■■□□□ 1.93
TRPT1-201ENST00000317459 TJP1Q07157 1748 aa27.08■■□□□ 1.93
TRPT1-201ENST00000317459 CRKLP46109 303 aaKnown RBP27.07■■□□□ 1.92
TRPT1-201ENST00000317459 MSL1Q68DK7 614 aa27.07■■□□□ 1.92
TRPT1-201ENST00000317459 VSIG10Q8N0Z9 540 aa27.07■■□□□ 1.92
TRPT1-201ENST00000317459 CICQ96RK0 1608 aaPredicted RBP27.07■■□□□ 1.92
TRPT1-201ENST00000317459 CCDC146Q8IYE0 955 aa27.06■■□□□ 1.92
TRPT1-201ENST00000317459 ARXQ96QS3 562 aa27.06■■□□□ 1.92
TRPT1-201ENST00000317459 ADAMTS8Q9UP79 889 aa27.06■■□□□ 1.92
TRPT1-201ENST00000317459 UBR2Q8IWV8 1755 aa27.05■■□□□ 1.92
TRPT1-201ENST00000317459 RPS6KA4O75676 772 aa27.05■■□□□ 1.92
TRPT1-201ENST00000317459 TRAPPC3LQ5T215 181 aa27.05■■□□□ 1.92
TRPT1-201ENST00000317459 ZNF496Q96IT1 587 aaPredicted RBP27.05■■□□□ 1.92
TRPT1-201ENST00000317459 ADRA2BP18089 450 aa27.04■■□□□ 1.92
TRPT1-201ENST00000317459 FMNL2Q96PY5 1086 aa27.04■■□□□ 1.92
TRPT1-201ENST00000317459 DLG5Q8TDM6 1919 aa27.04■■□□□ 1.92
TRPT1-201ENST00000317459 RIPK4P57078 832 aa27.03■■□□□ 1.92
TRPT1-201ENST00000317459 RUNDC1Q96C34 613 aa27.03■■□□□ 1.92
TRPT1-201ENST00000317459 HEG1Q9ULI3 1381 aa27.02■■□□□ 1.92
TRPT1-201ENST00000317459 KCNQ3O43525 872 aa27.02■■□□□ 1.92
TRPT1-201ENST00000317459 CYP19A1P11511 503 aaPredicted RBP27.02■■□□□ 1.92
TRPT1-201ENST00000317459 TAF7Q15545 349 aaPredicted RBP27.02■■□□□ 1.92
TRPT1-201ENST00000317459 CCDC87Q9NVE4 849 aa27.02■■□□□ 1.92
TRPT1-201ENST00000317459 TMPOP42166 694 aaKnown RBP27.01■■□□□ 1.91
TRPT1-201ENST00000317459 INTS5Q6P9B9 1019 aaKnown RBP27.01■■□□□ 1.91
TRPT1-201ENST00000317459 COL24A1Q17RW2 1714 aa27■■□□□ 1.91
TRPT1-201ENST00000317459 STARD3NLO95772 234 aa27■■□□□ 1.91
TRPT1-201ENST00000317459 RFC4P35249 363 aa27■■□□□ 1.91
TRPT1-201ENST00000317459 LMOD3Q0VAK6 560 aa27■■□□□ 1.91
TRPT1-201ENST00000317459 ARHGEF1Q92888 912 aaKnown RBP27■■□□□ 1.91
TRPT1-201ENST00000317459 THUMPD2Q9BTF0 503 aaKnown RBP27■■□□□ 1.91
TRPT1-201ENST00000317459 FHDC1Q9C0D6 1143 aaPredicted RBP27■■□□□ 1.91
TRPT1-201ENST00000317459 MYH14Q7Z406 1995 aaKnown RBP27■■□□□ 1.91
TRPT1-201ENST00000317459 TEX13AQ9BXU3 409 aaPredicted RBP26.99■■□□□ 1.91
TRPT1-201ENST00000317459 RRP7AQ9Y3A4 280 aaKnown RBP26.99■■□□□ 1.91
TRPT1-201ENST00000317459 NEUROD2Q15784 382 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms