RNA–Protein interactions for RNA: ENST00000316087.12

SPATA9-202, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-202ENST00000316087 CABP2Q9NPB3 220 aa7.66□□□□□ -1.18
SPATA9-202ENST00000316087 EDC4Q6P2E9 1401 aaKnown RBP7.66□□□□□ -1.18
SPATA9-202ENST00000316087 ARHGEF40Q8TER5 1519 aa7.65□□□□□ -1.18
SPATA9-202ENST00000316087 MAP3K13O43283 966 aa7.65□□□□□ -1.18
SPATA9-202ENST00000316087 EPB41L2O43491 1005 aaKnown RBP7.65□□□□□ -1.18
SPATA9-202ENST00000316087 TIE1P35590 1138 aa7.65□□□□□ -1.18
SPATA9-202ENST00000316087 LCE2DQ5TA82 110 aaPredicted RBP7.65□□□□□ -1.18
SPATA9-202ENST00000316087 ANKRD45Q5TZF3 282 aa7.65□□□□□ -1.18
SPATA9-202ENST00000316087 FBXW7Q969H0 707 aa7.65□□□□□ -1.18
SPATA9-202ENST00000316087 CCDC97Q96F63 343 aaPredicted RBP7.65□□□□□ -1.18
SPATA9-202ENST00000316087 PPP1R9BQ96SB3 815 aa7.65□□□□□ -1.18
SPATA9-202ENST00000316087 MAP7D2Q96T17 732 aa7.65□□□□□ -1.18
SPATA9-202ENST00000316087 LNPKQ9C0E8 428 aa7.65□□□□□ -1.18
SPATA9-202ENST00000316087 RRAGDQ9NQL2 400 aaPredicted RBP7.65□□□□□ -1.18
SPATA9-202ENST00000316087 CD163L1Q9NR16 1453 aa7.65□□□□□ -1.19
SPATA9-202ENST00000316087 HMMRO75330 724 aa7.64□□□□□ -1.19
SPATA9-202ENST00000316087 MSNP26038 577 aaKnown RBP7.64□□□□□ -1.19
SPATA9-202ENST00000316087 HSP90AA2PQ14568 343 aaPredicted RBP7.64□□□□□ -1.19
SPATA9-202ENST00000316087 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.64□□□□□ -1.19
SPATA9-202ENST00000316087 MTERF4Q7Z6M4 381 aaKnown RBP7.64□□□□□ -1.19
SPATA9-202ENST00000316087 MRPL50Q8N5N7 158 aaKnown RBP7.64□□□□□ -1.19
SPATA9-202ENST00000316087 SERPINA10Q9UK55 444 aa7.64□□□□□ -1.19
SPATA9-202ENST00000316087 TRPC6Q9Y210 931 aa7.64□□□□□ -1.19
SPATA9-202ENST00000316087 PTPRCP08575 1304 aa7.64□□□□□ -1.19
SPATA9-202ENST00000316087 ALKQ9UM73 1620 aa7.64□□□□□ -1.19
SPATA9-202ENST00000316087 KIAA0232Q92628 1395 aa7.63□□□□□ -1.19
SPATA9-202ENST00000316087 VAMP4O75379 141 aa7.63□□□□□ -1.19
SPATA9-202ENST00000316087 MBD3O95983 291 aa7.63□□□□□ -1.19
SPATA9-202ENST00000316087 ZNF853P0CG23 659 aa7.63□□□□□ -1.19
SPATA9-202ENST00000316087 NASPP49321 788 aaPredicted RBP7.63□□□□□ -1.19
SPATA9-202ENST00000316087 HDGFP51858 240 aaKnown RBP7.63□□□□□ -1.19
SPATA9-202ENST00000316087 ZNF445P59923 1031 aa7.63□□□□□ -1.19
SPATA9-202ENST00000316087 CSPP1Q1MSJ5 1256 aa7.63□□□□□ -1.19
SPATA9-202ENST00000316087 RBM26Q5T8P6 1007 aaKnown RBP7.63□□□□□ -1.19
SPATA9-202ENST00000316087 TBC1D9Q6ZT07 1266 aa7.63□□□□□ -1.19
SPATA9-202ENST00000316087 ZSCAN30Q86W11 494 aa7.63□□□□□ -1.19
SPATA9-202ENST00000316087 SIRT1Q96EB6 747 aa7.63□□□□□ -1.19
SPATA9-202ENST00000316087 GGNBP2Q9H3C7 697 aa7.63□□□□□ -1.19
SPATA9-202ENST00000316087 TNNQ9UQP3 1299 aa7.63□□□□□ -1.19
SPATA9-202ENST00000316087 RICTORQ6R327 1708 aa7.63□□□□□ -1.19
SPATA9-202ENST00000316087 SOS1Q07889 1333 aaPredicted RBP7.63□□□□□ -1.19
SPATA9-202ENST00000316087 POTEFA5A3E0 1075 aa7.63□□□□□ -1.19
SPATA9-202ENST00000316087 PRKAR2BP31323 418 aa7.63□□□□□ -1.19
SPATA9-202ENST00000316087 TWISTNBQ3B726 338 aaPredicted RBP7.63□□□□□ -1.19
SPATA9-202ENST00000316087 GPIHBP1Q8IV16 184 aa7.63□□□□□ -1.19
SPATA9-202ENST00000316087 SYAP1Q96A49 352 aaPredicted RBP7.63□□□□□ -1.19
SPATA9-202ENST00000316087 DCTPP1Q9H773 170 aa7.63□□□□□ -1.19
SPATA9-202ENST00000316087 DDX49Q9Y6V7 483 aaKnown RBP7.63□□□□□ -1.19
SPATA9-202ENST00000316087 PHF14O94880 888 aa7.62□□□□□ -1.19
SPATA9-202ENST00000316087 MCCP23508 829 aa7.62□□□□□ -1.19
SPATA9-202ENST00000316087 IDI1Q13907 227 aa7.62□□□□□ -1.19
SPATA9-202ENST00000316087 PRAM1Q96QH2 718 aa7.62□□□□□ -1.19
SPATA9-202ENST00000316087 CDK19Q9BWU1 502 aa7.62□□□□□ -1.19
SPATA9-202ENST00000316087 RIMS2Q9UQ26 1411 aa7.61□□□□□ -1.19
SPATA9-202ENST00000316087 KNDC1Q76NI1 1749 aa7.61□□□□□ -1.19
SPATA9-202ENST00000316087 TTC22Q5TAA0 569 aa7.61□□□□□ -1.19
SPATA9-202ENST00000316087 RASEFQ8IZ41 740 aa7.61□□□□□ -1.19
SPATA9-202ENST00000316087 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.61□□□□□ -1.19
SPATA9-202ENST00000316087 KIF2CQ99661 725 aa7.61□□□□□ -1.19
SPATA9-202ENST00000316087 CFAP65Q6ZU64 1925 aaKnown RBP7.61□□□□□ -1.19
SPATA9-202ENST00000316087 NRKQ7Z2Y5 1582 aa7.61□□□□□ -1.19
SPATA9-202ENST00000316087 AGLP35573 1532 aa7.61□□□□□ -1.19
SPATA9-202ENST00000316087 SSH2Q76I76 1423 aa7.61□□□□□ -1.19
SPATA9-202ENST00000316087 MON2Q7Z3U7 1717 aa7.6□□□□□ -1.19
SPATA9-202ENST00000316087 ARHGEF10O15013 1369 aa7.6□□□□□ -1.19
SPATA9-202ENST00000316087 BAG4O95429 457 aaKnown RBP7.6□□□□□ -1.19
SPATA9-202ENST00000316087 ANAPC15P60006 121 aa7.6□□□□□ -1.19
SPATA9-202ENST00000316087 ANKRD44Q8N8A2 993 aa7.6□□□□□ -1.19
SPATA9-202ENST00000316087 PDCL3Q9H2J4 239 aa7.6□□□□□ -1.19
SPATA9-202ENST00000316087 POLKQ9UBT6 870 aa7.6□□□□□ -1.19
SPATA9-202ENST00000316087 MAP2P11137 1827 aaKnown RBP7.6□□□□□ -1.19
SPATA9-202ENST00000316087 ITSN1Q15811 1721 aa7.6□□□□□ -1.19
SPATA9-202ENST00000316087 TTLL13PA6NNM8 815 aa7.59□□□□□ -1.19
SPATA9-202ENST00000316087 FAM184AQ8NB25 1140 aa7.59□□□□□ -1.19
SPATA9-202ENST00000316087 COG3Q96JB2 828 aa7.59□□□□□ -1.19
SPATA9-202ENST00000316087 PANK2Q9BZ23 570 aa7.59□□□□□ -1.19
SPATA9-202ENST00000316087 SRCIN1Q9C0H9 1055 aa7.59□□□□□ -1.19
SPATA9-202ENST00000316087 OSBPL3Q9H4L5 887 aa7.59□□□□□ -1.19
SPATA9-202ENST00000316087 MYO5BQ9ULV0 1848 aa7.59□□□□□ -1.19
SPATA9-202ENST00000316087 MINK1Q8N4C8 1332 aaPredicted RBP7.59□□□□□ -1.19
SPATA9-202ENST00000316087 ERC2O15083 957 aa7.59□□□□□ -1.2
SPATA9-202ENST00000316087 OFD1O75665 1012 aa7.59□□□□□ -1.2
SPATA9-202ENST00000316087 CYP2E1P05181 493 aaPredicted RBP7.59□□□□□ -1.2
SPATA9-202ENST00000316087 CHRM1P11229 460 aaPredicted RBP7.59□□□□□ -1.2
SPATA9-202ENST00000316087 NCLP19338 710 aaKnown RBP7.59□□□□□ -1.2
SPATA9-202ENST00000316087 IL13P35225 146 aa7.59□□□□□ -1.2
SPATA9-202ENST00000316087 CCT4P50991 539 aaKnown RBP7.59□□□□□ -1.2
SPATA9-202ENST00000316087 PROSER2Q86WR7 435 aaPredicted RBP7.59□□□□□ -1.2
SPATA9-202ENST00000316087 PLEKHM2Q8IWE5 1019 aa7.59□□□□□ -1.2
SPATA9-202ENST00000316087 INTS4Q96HW7 963 aaKnown RBP7.59□□□□□ -1.2
SPATA9-202ENST00000316087 USP26Q9BXU7 913 aa7.59□□□□□ -1.2
SPATA9-202ENST00000316087 MBIPQ9NS73 344 aa7.59□□□□□ -1.2
SPATA9-202ENST00000316087 CABP1Q9NZU7 370 aa7.59□□□□□ -1.2
SPATA9-202ENST00000316087 STK26Q9P289 416 aa7.59□□□□□ -1.2
SPATA9-202ENST00000316087 COLQQ9Y215 455 aaPredicted RBP7.59□□□□□ -1.2
SPATA9-202ENST00000316087 TTC21BQ7Z4L5 1316 aa7.58□□□□□ -1.2
SPATA9-202ENST00000316087 ZNF500O60304 480 aaPredicted RBP7.58□□□□□ -1.2
SPATA9-202ENST00000316087 LETM1O95202 739 aaPredicted RBP7.58□□□□□ -1.2
SPATA9-202ENST00000316087 FAM177A1Q8N128 213 aaPredicted RBP7.58□□□□□ -1.2
SPATA9-202ENST00000316087 CCDC39Q9UFE4 941 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms