RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 CCDC39Q9UFE4 941 aa16.86■□□□□ 0.29
MKS1-201ENST00000313863 PEAK1Q9H792 1746 aa16.86■□□□□ 0.29
MKS1-201ENST00000313863 SOS1Q07889 1333 aaPredicted RBP16.86■□□□□ 0.29
MKS1-201ENST00000313863 PRIM1P49642 420 aaKnown RBP16.85■□□□□ 0.29
MKS1-201ENST00000313863 TMX3Q96JJ7 454 aa16.85■□□□□ 0.29
MKS1-201ENST00000313863 LRRCC1Q9C099 1032 aa16.85■□□□□ 0.29
MKS1-201ENST00000313863 USP31Q70CQ4 1352 aa16.85■□□□□ 0.29
MKS1-201ENST00000313863 TSPYL4Q9UJ04 414 aa16.85■□□□□ 0.29
MKS1-201ENST00000313863 AOX1Q06278 1338 aa16.85■□□□□ 0.29
MKS1-201ENST00000313863 PLEKHG3A1L390 1219 aa16.84■□□□□ 0.29
MKS1-201ENST00000313863 PHF14O94880 888 aa16.84■□□□□ 0.29
MKS1-201ENST00000313863 SLC4A10Q6U841 1118 aa16.84■□□□□ 0.29
MKS1-201ENST00000313863 IL17RAQ96F46 866 aa16.84■□□□□ 0.29
MKS1-201ENST00000313863 BRD1O95696 1058 aa16.84■□□□□ 0.29
MKS1-201ENST00000313863 MX1P20591 662 aa16.84■□□□□ 0.29
MKS1-201ENST00000313863 PDCL3Q9H2J4 239 aa16.84■□□□□ 0.29
MKS1-201ENST00000313863 PRR36Q9H6K5 1346 aa16.83■□□□□ 0.29
MKS1-201ENST00000313863 FAM208AQ9UK61 1670 aaKnown RBP16.83■□□□□ 0.29
MKS1-201ENST00000313863 HTATSF1O43719 755 aaKnown RBP16.83■□□□□ 0.28
MKS1-201ENST00000313863 USP6P35125 1406 aa16.83■□□□□ 0.28
MKS1-201ENST00000313863 SALL3Q9BXA9 1300 aa16.83■□□□□ 0.28
MKS1-201ENST00000313863 ZKSCAN5Q9Y2L8 839 aa16.82■□□□□ 0.28
MKS1-201ENST00000313863 XRN1Q8IZH2 1706 aaKnown RBP16.82■□□□□ 0.28
MKS1-201ENST00000313863 NCKAP5LQ9HCH0 1330 aa16.82■□□□□ 0.28
MKS1-201ENST00000313863 TMEM63CQ9P1W3 806 aa16.82■□□□□ 0.28
MKS1-201ENST00000313863 STAP2Q9UGK3 403 aa16.82■□□□□ 0.28
MKS1-201ENST00000313863 PXDNLA1KZ92 1463 aa16.82■□□□□ 0.28
MKS1-201ENST00000313863 ATP8B2P98198 1209 aa16.81■□□□□ 0.28
MKS1-201ENST00000313863 FAM69CQ0P6D2 419 aa16.81■□□□□ 0.28
MKS1-201ENST00000313863 CCDC30Q5VVM6 783 aa16.81■□□□□ 0.28
MKS1-201ENST00000313863 MAP7D2Q96T17 732 aa16.81■□□□□ 0.28
MKS1-201ENST00000313863 RBM27Q9P2N5 1060 aaKnown RBP16.81■□□□□ 0.28
MKS1-201ENST00000313863 ACEP12821 1306 aa16.81■□□□□ 0.28
MKS1-201ENST00000313863 TTC21AQ8NDW8 1320 aa16.81■□□□□ 0.28
MKS1-201ENST00000313863 LRRC37A3O60309 1634 aa16.81■□□□□ 0.28
MKS1-201ENST00000313863 SYCE3A1L190 88 aa16.8■□□□□ 0.28
MKS1-201ENST00000313863 CHMLP26374 656 aa16.8■□□□□ 0.28
MKS1-201ENST00000313863 HSP90AB2PQ58FF8 381 aa16.8■□□□□ 0.28
MKS1-201ENST00000313863 TSPY26PQ9H489 355 aa16.8■□□□□ 0.28
MKS1-201ENST00000313863 ESF1Q9H501 851 aaKnown RBP16.8■□□□□ 0.28
MKS1-201ENST00000313863 SBNO1A3KN83 1393 aa16.8■□□□□ 0.28
MKS1-201ENST00000313863 TSPOAP1O95153 1857 aa16.8■□□□□ 0.28
MKS1-201ENST00000313863 FLT4P35916 1363 aa16.8■□□□□ 0.28
MKS1-201ENST00000313863 KDRP35968 1356 aa16.8■□□□□ 0.28
MKS1-201ENST00000313863 ANO2Q9NQ90 1003 aa16.79■□□□□ 0.28
MKS1-201ENST00000313863 EXOC6BQ9Y2D4 811 aa16.79■□□□□ 0.28
MKS1-201ENST00000313863 WDR33Q9C0J8 1336 aaKnown RBP16.79■□□□□ 0.28
MKS1-201ENST00000313863 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.79■□□□□ 0.28
MKS1-201ENST00000313863 TRIM6-TRIM34B2RNG4 842 aa16.79■□□□□ 0.28
MKS1-201ENST00000313863 G2E3Q7L622 706 aa16.79■□□□□ 0.28
MKS1-201ENST00000313863 KLHL34Q8N239 644 aa16.79■□□□□ 0.28
MKS1-201ENST00000313863 F6X3S4 739 aa16.78■□□□□ 0.28
MKS1-201ENST00000313863 FAM184AQ8NB25 1140 aa16.78■□□□□ 0.28
MKS1-201ENST00000313863 BABAM1Q9NWV8 329 aa16.78■□□□□ 0.28
MKS1-201ENST00000313863 UBR1Q8IWV7 1749 aa16.78■□□□□ 0.28
MKS1-201ENST00000313863 FLIIQ13045 1269 aa16.77■□□□□ 0.28
MKS1-201ENST00000313863 MTHFSDQ2M296 383 aaKnown RBP16.77■□□□□ 0.28
MKS1-201ENST00000313863 RILPL2Q969X0 211 aa16.77■□□□□ 0.28
MKS1-201ENST00000313863 ZMYND15Q9H091 742 aa16.77■□□□□ 0.28
MKS1-201ENST00000313863 MAP3K19Q56UN5 1328 aa16.77■□□□□ 0.28
MKS1-201ENST00000313863 ROBO2Q9HCK4 1378 aa16.77■□□□□ 0.28
MKS1-201ENST00000313863 TMEM2Q9UHN6 1383 aa16.77■□□□□ 0.28
MKS1-201ENST00000313863 FKBP5Q13451 457 aaPredicted RBP16.77■□□□□ 0.27
MKS1-201ENST00000313863 RAB11FIP3O75154 756 aa16.76■□□□□ 0.27
MKS1-201ENST00000313863 UVSSAQ2YD98 709 aa16.76■□□□□ 0.27
MKS1-201ENST00000313863 RIMS1Q86UR5 1692 aaKnown RBP16.76■□□□□ 0.27
MKS1-201ENST00000313863 ADAMTS13Q76LX8 1427 aa16.76■□□□□ 0.27
MKS1-201ENST00000313863 TNRQ92752 1358 aa16.76■□□□□ 0.27
MKS1-201ENST00000313863 MTERF4Q7Z6M4 381 aaKnown RBP16.76■□□□□ 0.27
MKS1-201ENST00000313863 LETM1O95202 739 aaPredicted RBP16.75■□□□□ 0.27
MKS1-201ENST00000313863 VSIG10Q8N0Z9 540 aa16.75■□□□□ 0.27
MKS1-201ENST00000313863 MIS18AQ9NYP9 233 aa16.75■□□□□ 0.27
MKS1-201ENST00000313863 R3HCC1Q9Y3T6 440 aaKnown RBP16.75■□□□□ 0.27
MKS1-201ENST00000313863 IGSF1Q8N6C5 1336 aa16.74■□□□□ 0.27
MKS1-201ENST00000313863 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.74■□□□□ 0.27
MKS1-201ENST00000313863 PTMAP06454 111 aaKnown RBP16.74■□□□□ 0.27
MKS1-201ENST00000313863 FOXD4L5Q5VV16 416 aaPredicted RBP16.74■□□□□ 0.27
MKS1-201ENST00000313863 FOXD4L4Q8WXT5 416 aaPredicted RBP16.74■□□□□ 0.27
MKS1-201ENST00000313863 CHMP4AQ9BY43 222 aa16.74■□□□□ 0.27
MKS1-201ENST00000313863 PALD1Q9ULE6 856 aa16.74■□□□□ 0.27
MKS1-201ENST00000313863 PTPRUQ92729 1446 aa16.74■□□□□ 0.27
MKS1-201ENST00000313863 PLEKHG1Q9ULL1 1385 aa16.73■□□□□ 0.27
MKS1-201ENST00000313863 HSPA4P34932 840 aa16.73■□□□□ 0.27
MKS1-201ENST00000313863 TMEM87AQ8NBN3 555 aa16.73■□□□□ 0.27
MKS1-201ENST00000313863 PLEKHG5O94827 1062 aa16.73■□□□□ 0.27
MKS1-201ENST00000313863 UBTFL1P0CB47 393 aaPredicted RBP16.73■□□□□ 0.27
MKS1-201ENST00000313863 MLECQ14165 292 aa16.73■□□□□ 0.27
MKS1-201ENST00000313863 NSFL1CQ9UNZ2 370 aaKnown RBP16.73■□□□□ 0.27
MKS1-201ENST00000313863 TCHHQ07283 1943 aa16.72■□□□□ 0.27
MKS1-201ENST00000313863 PNMA6EA0A0J9YXQ4 647 aa16.72■□□□□ 0.27
MKS1-201ENST00000313863 GNAT3A8MTJ3 354 aa16.72■□□□□ 0.27
MKS1-201ENST00000313863 DYNC1I1O14576 645 aa16.72■□□□□ 0.27
MKS1-201ENST00000313863 FOXO3O43524 673 aa16.72■□□□□ 0.27
MKS1-201ENST00000313863 CYB5RLQ6IPT4 315 aa16.72■□□□□ 0.27
MKS1-201ENST00000313863 ATP6V1DQ9Y5K8 247 aa16.72■□□□□ 0.27
MKS1-201ENST00000313863 AMPHP49418 695 aa16.71■□□□□ 0.27
MKS1-201ENST00000313863 XPCQ01831 940 aaPredicted RBP16.71■□□□□ 0.27
MKS1-201ENST00000313863 SASS6Q6UVJ0 657 aa16.71■□□□□ 0.27
MKS1-201ENST00000313863 LRRFIP2Q9Y608 721 aaKnown RBP16.71■□□□□ 0.27
MKS1-201ENST00000313863 KIAA2012Q0VF49 1180 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms