RNA–Protein interactions for RNA: ENST00000313050.11

SEC16A-203, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SEC16A, Length 8,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-203ENST00000313050 TOP1P11387 765 aaKnown RBP12.21□□□□□ -0.45
SEC16A-203ENST00000313050 LNPKQ9C0E8 428 aa12.21□□□□□ -0.45
SEC16A-203ENST00000313050 EHBP1Q8NDI1 1231 aa12.21□□□□□ -0.45
SEC16A-203ENST00000313050 APBB1IPQ7Z5R6 666 aaPredicted RBP12.21□□□□□ -0.46
SEC16A-203ENST00000313050 PFDN1O60925 122 aa12.21□□□□□ -0.46
SEC16A-203ENST00000313050 TMEM132AQ24JP5 1023 aa12.21□□□□□ -0.46
SEC16A-203ENST00000313050 PRPF31Q8WWY3 499 aaKnown RBP12.21□□□□□ -0.46
SEC16A-203ENST00000313050 VPS37DQ86XT2 251 aa12.2□□□□□ -0.46
SEC16A-203ENST00000313050 ZBTB16Q05516 673 aa12.2□□□□□ -0.46
SEC16A-203ENST00000313050 NBPF8Q3BBV2 869 aa12.2□□□□□ -0.46
SEC16A-203ENST00000313050 PDCD7Q8N8D1 485 aaKnown RBP12.2□□□□□ -0.46
SEC16A-203ENST00000313050 MAP7D1Q3KQU3 841 aa12.2□□□□□ -0.46
SEC16A-203ENST00000313050 PPP1R12CQ9BZL4 782 aa12.2□□□□□ -0.46
SEC16A-203ENST00000313050 SEPT8Q92599 483 aa12.2□□□□□ -0.46
SEC16A-203ENST00000313050 CFDP1Q9UEE9 299 aaPredicted RBP12.2□□□□□ -0.46
SEC16A-203ENST00000313050 NGEFQ8N5V2 710 aa12.2□□□□□ -0.46
SEC16A-203ENST00000313050 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.2□□□□□ -0.461e-6■■■□□ 16.9
SEC16A-203ENST00000313050 MVPQ14764 893 aaKnown RBP12.2□□□□□ -0.46
SEC16A-203ENST00000313050 CCDC38Q502W7 563 aa12.2□□□□□ -0.46
SEC16A-203ENST00000313050 DNAI2Q9GZS0 605 aa12.2□□□□□ -0.46
SEC16A-203ENST00000313050 RLBP1P12271 317 aa12.19□□□□□ -0.46
SEC16A-203ENST00000313050 BAZ1BQ9UIG0 1483 aaKnown RBP12.19□□□□□ -0.46
SEC16A-203ENST00000313050 LARP1Q6PKG0 1096 aaKnown RBP12.19□□□□□ -0.46
SEC16A-203ENST00000313050 ANKRD30AQ9BXX3 1397 aa12.19□□□□□ -0.46
SEC16A-203ENST00000313050 ERCC3P19447 782 aa12.19□□□□□ -0.46
SEC16A-203ENST00000313050 TRIM21P19474 475 aaKnown RBP12.19□□□□□ -0.46
SEC16A-203ENST00000313050 G3BP1Q13283 466 aaKnown RBP eCLIP12.19□□□□□ -0.462e-6■■■□□ 18.6
SEC16A-203ENST00000313050 TSNARE1Q96NA8 513 aa12.19□□□□□ -0.46
SEC16A-203ENST00000313050 VPS18Q9P253 973 aa12.19□□□□□ -0.46
SEC16A-203ENST00000313050 MAP4K4O95819 1239 aaPredicted RBP12.18□□□□□ -0.46
SEC16A-203ENST00000313050 PSMC4P43686 418 aa12.18□□□□□ -0.46
SEC16A-203ENST00000313050 SETDB1Q15047 1291 aa12.18□□□□□ -0.46
SEC16A-203ENST00000313050 CPLX4Q7Z7G2 160 aa12.18□□□□□ -0.46
SEC16A-203ENST00000313050 PHLDB2Q86SQ0 1253 aa12.18□□□□□ -0.46
SEC16A-203ENST00000313050 CCDC170Q8IYT3 715 aa12.18□□□□□ -0.46
SEC16A-203ENST00000313050 TRMT1Q9NXH9 659 aaKnown RBP12.18□□□□□ -0.46
SEC16A-203ENST00000313050 SAMD15Q9P1V8 674 aa12.18□□□□□ -0.46
SEC16A-203ENST00000313050 FHAD1B1AJZ9 1412 aa12.18□□□□□ -0.46
SEC16A-203ENST00000313050 TRIM4Q9C037 500 aa12.18□□□□□ -0.46
SEC16A-203ENST00000313050 NACADO15069 1562 aa12.17□□□□□ -0.46
SEC16A-203ENST00000313050 ARHGAP35Q9NRY4 1499 aa12.17□□□□□ -0.46
SEC16A-203ENST00000313050 CIB2O75838 187 aa12.17□□□□□ -0.46
SEC16A-203ENST00000313050 ANO10Q9NW15 660 aa12.17□□□□□ -0.46
SEC16A-203ENST00000313050 A6NNZ2 444 aa12.17□□□□□ -0.46
SEC16A-203ENST00000313050 TUBB8Q3ZCM7 444 aa12.17□□□□□ -0.46
SEC16A-203ENST00000313050 MORC4Q8TE76 937 aa12.17□□□□□ -0.46
SEC16A-203ENST00000313050 GBP5Q96PP8 586 aa12.17□□□□□ -0.46
SEC16A-203ENST00000313050 NUP88Q99567 741 aaPredicted RBP12.17□□□□□ -0.46
SEC16A-203ENST00000313050 MGEA5O60502 916 aa12.17□□□□□ -0.46
SEC16A-203ENST00000313050 IQCGQ9H095 443 aaKnown RBP12.17□□□□□ -0.46
SEC16A-203ENST00000313050 RUFY3Q7L099 469 aa12.17□□□□□ -0.46
SEC16A-203ENST00000313050 TRIM7Q9C029 511 aa12.17□□□□□ -0.46
SEC16A-203ENST00000313050 DIXDC1Q155Q3 683 aa12.17□□□□□ -0.46
SEC16A-203ENST00000313050 BACH2Q9BYV9 841 aa12.17□□□□□ -0.46
SEC16A-203ENST00000313050 JADE2Q9NQC1 790 aa12.17□□□□□ -0.46
SEC16A-203ENST00000313050 CEP164Q9UPV0 1460 aa12.17□□□□□ -0.46
SEC16A-203ENST00000313050 GMNNO75496 209 aa12.16□□□□□ -0.46
SEC16A-203ENST00000313050 CTNNBL1Q8WYA6 563 aaPredicted RBP12.16□□□□□ -0.46
SEC16A-203ENST00000313050 LARP1BQ659C4 914 aaKnown RBP12.16□□□□□ -0.46
SEC16A-203ENST00000313050 FKBP15Q5T1M5 1219 aa12.16□□□□□ -0.46
SEC16A-203ENST00000313050 TERF2IPQ9NYB0 399 aa12.16□□□□□ -0.46
SEC16A-203ENST00000313050 MTUS1Q9ULD2 1270 aa12.16□□□□□ -0.46
SEC16A-203ENST00000313050 CEP104O60308 925 aa12.16□□□□□ -0.46
SEC16A-203ENST00000313050 GTF2E1P29083 439 aaPredicted RBP12.16□□□□□ -0.46
SEC16A-203ENST00000313050 ARHGAP25P42331 645 aa12.16□□□□□ -0.46
SEC16A-203ENST00000313050 NUF2Q9BZD4 464 aa12.16□□□□□ -0.46
SEC16A-203ENST00000313050 RB1CC1Q8TDY2 1594 aa12.16□□□□□ -0.46
SEC16A-203ENST00000313050 PIP4K2BP78356 416 aa12.16□□□□□ -0.46
SEC16A-203ENST00000313050 BICDL2A1A5D9 508 aa12.15□□□□□ -0.46
SEC16A-203ENST00000313050 INPP5BP32019 993 aa12.15□□□□□ -0.46
SEC16A-203ENST00000313050 CCDC129Q6ZRS4 1044 aa12.15□□□□□ -0.46
SEC16A-203ENST00000313050 CCDC150Q8NCX0 1101 aa12.15□□□□□ -0.46
SEC16A-203ENST00000313050 FAM76AQ8TAV0 307 aa12.15□□□□□ -0.46
SEC16A-203ENST00000313050 ADCY5O95622 1261 aa12.15□□□□□ -0.46
SEC16A-203ENST00000313050 USP6NLQ92738 828 aa12.15□□□□□ -0.46
SEC16A-203ENST00000313050 CTAGE5O15320 804 aa12.15□□□□□ -0.46
SEC16A-203ENST00000313050 LUC7L3O95232 432 aaKnown RBP12.15□□□□□ -0.46
SEC16A-203ENST00000313050 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.15□□□□□ -0.464e-6■■■■■ 58.9
SEC16A-203ENST00000313050 ZEB2O60315 1214 aa12.15□□□□□ -0.46
SEC16A-203ENST00000313050 EPSTI1Q96J88 318 aa12.15□□□□□ -0.46
SEC16A-203ENST00000313050 CYP46A1Q9Y6A2 500 aa12.15□□□□□ -0.46
SEC16A-203ENST00000313050 HDGFP51858 240 aaKnown RBP12.15□□□□□ -0.47
SEC16A-203ENST00000313050 LRRC43Q8N309 656 aa12.15□□□□□ -0.47
SEC16A-203ENST00000313050 PPP1R9BQ96SB3 815 aa12.15□□□□□ -0.47
SEC16A-203ENST00000313050 API5Q9BZZ5 524 aaKnown RBP12.15□□□□□ -0.47
SEC16A-203ENST00000313050 PRC1O43663 620 aa12.14□□□□□ -0.47
SEC16A-203ENST00000313050 TRIM22Q8IYM9 498 aa12.14□□□□□ -0.47
SEC16A-203ENST00000313050 KIF5AQ12840 1032 aa12.14□□□□□ -0.47
SEC16A-203ENST00000313050 FGFR1OPO95684 399 aaKnown RBP12.14□□□□□ -0.47
SEC16A-203ENST00000313050 CACNA2D4Q7Z3S7 1137 aa12.14□□□□□ -0.47
SEC16A-203ENST00000313050 CTCFLQ8NI51 663 aaPredicted RBP12.14□□□□□ -0.47
SEC16A-203ENST00000313050 MRFAP1L1Q96HT8 127 aa12.14□□□□□ -0.47
SEC16A-203ENST00000313050 DIAPH1O60610 1272 aaKnown RBP12.14□□□□□ -0.47
SEC16A-203ENST00000313050 COG7P83436 770 aa12.14□□□□□ -0.47
SEC16A-203ENST00000313050 GOLGA1Q92805 767 aa12.14□□□□□ -0.47
SEC16A-203ENST00000313050 YEATS4O95619 227 aa12.14□□□□□ -0.47
SEC16A-203ENST00000313050 CAVIN2O95810 425 aa12.14□□□□□ -0.47
SEC16A-203ENST00000313050 GABPB1Q06547 395 aaPredicted RBP12.14□□□□□ -0.47
SEC16A-203ENST00000313050 RRP7AQ9Y3A4 280 aaKnown RBP12.14□□□□□ -0.47
SEC16A-203ENST00000313050 CTAGE9A4FU28 777 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms