RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 PTF1AQ7RTS3 328 aa16.56■□□□□ 0.24
CHMP2A-201ENST00000312547 BCL11BQ9C0K0 894 aaPredicted RBP16.56■□□□□ 0.24
CHMP2A-201ENST00000312547 TMOD3Q9NYL9 352 aa16.56■□□□□ 0.24
CHMP2A-201ENST00000312547 NHSQ6T4R5 1651 aa16.56■□□□□ 0.24
CHMP2A-201ENST00000312547 ZBED9Q6R2W3 1325 aa16.55■□□□□ 0.24
CHMP2A-201ENST00000312547 ZNF853P0CG23 659 aa16.55■□□□□ 0.24
CHMP2A-201ENST00000312547 CHL1O00533 1208 aa16.54■□□□□ 0.24
CHMP2A-201ENST00000312547 SYTL4Q96C24 671 aaPredicted RBP16.54■□□□□ 0.24
CHMP2A-201ENST00000312547 IFT57Q9NWB7 429 aa16.54■□□□□ 0.24
CHMP2A-201ENST00000312547 BABAM1Q9NWV8 329 aa16.54■□□□□ 0.24
CHMP2A-201ENST00000312547 TRIM37O94972 964 aa16.53■□□□□ 0.24
CHMP2A-201ENST00000312547 CFAP44Q96MT7 982 aa16.53■□□□□ 0.24
CHMP2A-201ENST00000312547 SIPA1L3O60292 1781 aaPredicted RBP16.53■□□□□ 0.24
CHMP2A-201ENST00000312547 SPINK5Q9NQ38 1064 aaPredicted RBP16.52■□□□□ 0.24
CHMP2A-201ENST00000312547 ATG3Q9NT62 314 aa16.52■□□□□ 0.24
CHMP2A-201ENST00000312547 SBF2Q86WG5 1849 aa16.52■□□□□ 0.23
CHMP2A-201ENST00000312547 BTBD11A6QL63 1104 aa16.51■□□□□ 0.23
CHMP2A-201ENST00000312547 GNAI1P63096 354 aa16.51■□□□□ 0.23
CHMP2A-201ENST00000312547 GOLGA2Q08379 1002 aa16.51■□□□□ 0.23
CHMP2A-201ENST00000312547 MIS18AQ9NYP9 233 aa16.51■□□□□ 0.23
CHMP2A-201ENST00000312547 ASAP1Q9ULH1 1129 aa16.51■□□□□ 0.23
CHMP2A-201ENST00000312547 ITGB4P16144 1822 aa16.5■□□□□ 0.23
CHMP2A-201ENST00000312547 SLC39A6Q13433 755 aa16.5■□□□□ 0.23
CHMP2A-201ENST00000312547 ZNF790Q6PG37 636 aa16.5■□□□□ 0.23
CHMP2A-201ENST00000312547 KCNQ3O43525 872 aa16.49■□□□□ 0.23
CHMP2A-201ENST00000312547 SLFN5Q08AF3 891 aa16.49■□□□□ 0.23
CHMP2A-201ENST00000312547 MBIPQ9NS73 344 aa16.49■□□□□ 0.23
CHMP2A-201ENST00000312547 TSPYL4Q9UJ04 414 aa16.49■□□□□ 0.23
CHMP2A-201ENST00000312547 VIRMAQ69YN4 1812 aaKnown RBP16.49■□□□□ 0.23
CHMP2A-201ENST00000312547 PAPPAQ13219 1627 aa16.48■□□□□ 0.23
CHMP2A-201ENST00000312547 E9PSI1 815 aa16.48■□□□□ 0.23
CHMP2A-201ENST00000312547 TRMT2AQ8IZ69 625 aaKnown RBP16.48■□□□□ 0.23
CHMP2A-201ENST00000312547 SMARCC1Q92922 1105 aaPredicted RBP16.48■□□□□ 0.23
CHMP2A-201ENST00000312547 CDCA7LQ96GN5 454 aa16.48■□□□□ 0.23
CHMP2A-201ENST00000312547 YTHDC1Q96MU7 727 aaKnown RBP16.48■□□□□ 0.23
CHMP2A-201ENST00000312547 LAS1LQ9Y4W2 734 aaKnown RBP16.48■□□□□ 0.23
CHMP2A-201ENST00000312547 KCPQ6ZWJ8 1503 aa16.47■□□□□ 0.23
CHMP2A-201ENST00000312547 PALLDQ8WX93 1383 aa16.47■□□□□ 0.23
CHMP2A-201ENST00000312547 HEG1Q9ULI3 1381 aa16.47■□□□□ 0.23
CHMP2A-201ENST00000312547 BTAF1O14981 1849 aa16.47■□□□□ 0.23
CHMP2A-201ENST00000312547 FANCIQ9NVI1 1328 aa16.46■□□□□ 0.23
CHMP2A-201ENST00000312547 TNS1Q9HBL0 1735 aaKnown RBP16.46■□□□□ 0.23
CHMP2A-201ENST00000312547 EIF4A1P60842 406 aaKnown RBP16.46■□□□□ 0.23
CHMP2A-201ENST00000312547 CCDC125Q86Z20 511 aa16.46■□□□□ 0.23
CHMP2A-201ENST00000312547 TTC5Q8N0Z6 440 aa16.46■□□□□ 0.23
CHMP2A-201ENST00000312547 TSR2Q969E8 191 aaKnown RBP16.46■□□□□ 0.23
CHMP2A-201ENST00000312547 ZNF496Q96IT1 587 aaPredicted RBP16.46■□□□□ 0.23
CHMP2A-201ENST00000312547 MYH16Q9H6N6 1097 aa16.46■□□□□ 0.23
CHMP2A-201ENST00000312547 KDM3BQ7LBC6 1761 aa16.46■□□□□ 0.22
CHMP2A-201ENST00000312547 PLSCR1O15162 318 aa16.45■□□□□ 0.22
CHMP2A-201ENST00000312547 APBA3O96018 575 aa16.45■□□□□ 0.22
CHMP2A-201ENST00000312547 SLC4A9Q96Q91 983 aa16.45■□□□□ 0.22
CHMP2A-201ENST00000312547 DUSP27Q5VZP5 1158 aa16.44■□□□□ 0.22
CHMP2A-201ENST00000312547 LOC102724428A0A0B4J2F2 783 aa16.43■□□□□ 0.22
CHMP2A-201ENST00000312547 PTCD1O75127 700 aaKnown RBP16.43■□□□□ 0.22
CHMP2A-201ENST00000312547 SIK1P57059 783 aa16.43■□□□□ 0.22
CHMP2A-201ENST00000312547 VSIG10Q8N0Z9 540 aa16.43■□□□□ 0.22
CHMP2A-201ENST00000312547 FMNL2Q96PY5 1086 aa16.43■□□□□ 0.22
CHMP2A-201ENST00000312547 LRP5O75197 1615 aa16.43■□□□□ 0.22
CHMP2A-201ENST00000312547 UBR2Q8IWV8 1755 aa16.43■□□□□ 0.22
CHMP2A-201ENST00000312547 PROM2Q8N271 834 aa16.42■□□□□ 0.22
CHMP2A-201ENST00000312547 GIGYF1O75420 1035 aaPredicted RBP16.41■□□□□ 0.22
CHMP2A-201ENST00000312547 KRT24Q2M2I5 525 aa16.41■□□□□ 0.22
CHMP2A-201ENST00000312547 DEFB132Q7Z7B7 95 aa16.41■□□□□ 0.22
CHMP2A-201ENST00000312547 C8orf58Q8NAV2 365 aa16.41■□□□□ 0.22
CHMP2A-201ENST00000312547 CAMKK2Q96RR4 588 aa16.41■□□□□ 0.22
CHMP2A-201ENST00000312547 RBM42Q9BTD8 480 aaKnown RBP16.41■□□□□ 0.22
CHMP2A-201ENST00000312547 SF3B2Q13435 895 aaKnown RBP16.4■□□□□ 0.22
CHMP2A-201ENST00000312547 TXNRD1Q16881 649 aa16.4■□□□□ 0.22
CHMP2A-201ENST00000312547 KAT6BQ8WYB5 2073 aa16.4■□□□□ 0.22
CHMP2A-201ENST00000312547 LY75O60449 1722 aa16.39■□□□□ 0.21
CHMP2A-201ENST00000312547 RGPD3A6NKT7 1758 aaPredicted RBP16.39■□□□□ 0.21
CHMP2A-201ENST00000312547 RGPD4Q7Z3J3 1758 aa16.39■□□□□ 0.21
CHMP2A-201ENST00000312547 CICQ96RK0 1608 aaPredicted RBP16.39■□□□□ 0.21
CHMP2A-201ENST00000312547 PRAMEF22A3QJZ6 481 aa16.39■□□□□ 0.21
CHMP2A-201ENST00000312547 HOXB7P09629 217 aa16.39■□□□□ 0.21
CHMP2A-201ENST00000312547 SNRPA1P09661 255 aaKnown RBP16.39■□□□□ 0.21
CHMP2A-201ENST00000312547 BAG6P46379 1132 aa16.39■□□□□ 0.21
CHMP2A-201ENST00000312547 EXOSC9Q06265 439 aaKnown RBP16.39■□□□□ 0.21
CHMP2A-201ENST00000312547 ITPK1Q13572 414 aa16.39■□□□□ 0.21
CHMP2A-201ENST00000312547 SLC27A3Q5K4L6 730 aa16.39■□□□□ 0.21
CHMP2A-201ENST00000312547 TSPYL6Q8N831 410 aa16.39■□□□□ 0.21
CHMP2A-201ENST00000312547 LRRC4BQ9NT99 713 aa16.39■□□□□ 0.21
CHMP2A-201ENST00000312547 CCNL1Q9UK58 526 aaPredicted RBP16.39■□□□□ 0.21
CHMP2A-201ENST00000312547 ZNF831Q5JPB2 1677 aa16.39■□□□□ 0.21
CHMP2A-201ENST00000312547 SOS1Q07889 1333 aaPredicted RBP16.39■□□□□ 0.21
CHMP2A-201ENST00000312547 ATP6V1AP38606 617 aa16.38■□□□□ 0.21
CHMP2A-201ENST00000312547 EN1Q05925 392 aaPredicted RBP16.38■□□□□ 0.21
CHMP2A-201ENST00000312547 DNAJC10Q8IXB1 793 aa16.38■□□□□ 0.21
CHMP2A-201ENST00000312547 EZH2Q15910 746 aaKnown RBP16.37■□□□□ 0.21
CHMP2A-201ENST00000312547 TEX13AQ9BXU3 409 aaPredicted RBP16.37■□□□□ 0.21
CHMP2A-201ENST00000312547 USP16Q9Y5T5 823 aa16.37■□□□□ 0.21
CHMP2A-201ENST00000312547 VAMP4O75379 141 aa16.36■□□□□ 0.21
CHMP2A-201ENST00000312547 KCNQ4P56696 695 aa16.36■□□□□ 0.21
CHMP2A-201ENST00000312547 ELL2O00472 640 aaPredicted RBP16.35■□□□□ 0.21
CHMP2A-201ENST00000312547 CYP19A1P11511 503 aaPredicted RBP16.35■□□□□ 0.21
CHMP2A-201ENST00000312547 TWISTNBQ3B726 338 aaPredicted RBP16.35■□□□□ 0.21
CHMP2A-201ENST00000312547 LINC00116Q8NCU8 138 aa16.35■□□□□ 0.21
CHMP2A-201ENST00000312547 TJP1Q07157 1748 aa16.35■□□□□ 0.21
CHMP2A-201ENST00000312547 CT47B1P0C2W7 299 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms