RNA–Protein interactions for RNA: ENST00000310169.2

CHRNA9-201, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA9, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-201ENST00000310169 LGR6Q9HBX8 967 aa12.84□□□□□ -0.35
CHRNA9-201ENST00000310169 MAP3K5Q99683 1374 aa12.84□□□□□ -0.35
CHRNA9-201ENST00000310169 PLEKHF1Q96S99 279 aa12.83□□□□□ -0.35
CHRNA9-201ENST00000310169 TOGARAM1Q9Y4F4 1720 aa12.83□□□□□ -0.36
CHRNA9-201ENST00000310169 RNMTO43148 476 aaKnown RBP12.83□□□□□ -0.36
CHRNA9-201ENST00000310169 CCDC146Q8IYE0 955 aa12.83□□□□□ -0.36
CHRNA9-201ENST00000310169 KDM6AO15550 1401 aaPredicted RBP12.83□□□□□ -0.36
CHRNA9-201ENST00000310169 VIRMAQ69YN4 1812 aaKnown RBP12.82□□□□□ -0.36
CHRNA9-201ENST00000310169 NBPF14Q5TI25 921 aa12.82□□□□□ -0.36
CHRNA9-201ENST00000310169 SMARCC1Q92922 1105 aaPredicted RBP12.82□□□□□ -0.36
CHRNA9-201ENST00000310169 SCN11AQ9UI33 1791 aa12.82□□□□□ -0.36
CHRNA9-201ENST00000310169 ZBED9Q6R2W3 1325 aa12.82□□□□□ -0.36
CHRNA9-201ENST00000310169 TEFQ10587 303 aa12.82□□□□□ -0.36
CHRNA9-201ENST00000310169 PROM2Q8N271 834 aa12.82□□□□□ -0.36
CHRNA9-201ENST00000310169 SLC52A2Q9HAB3 445 aa12.81□□□□□ -0.36
CHRNA9-201ENST00000310169 ASAP1Q9ULH1 1129 aa12.81□□□□□ -0.36
CHRNA9-201ENST00000310169 NFE2L2Q16236 605 aa12.81□□□□□ -0.36
CHRNA9-201ENST00000310169 RUNDC1Q96C34 613 aa12.81□□□□□ -0.36
CHRNA9-201ENST00000310169 RGPD3A6NKT7 1758 aaPredicted RBP12.81□□□□□ -0.36
CHRNA9-201ENST00000310169 RGPD4Q7Z3J3 1758 aa12.81□□□□□ -0.36
CHRNA9-201ENST00000310169 PALLDQ8WX93 1383 aa12.8□□□□□ -0.36
CHRNA9-201ENST00000310169 SRCAPQ6ZRS2 3230 aa12.8□□□□□ -0.36
CHRNA9-201ENST00000310169 NEUROD2Q15784 382 aa12.8□□□□□ -0.36
CHRNA9-201ENST00000310169 SLC27A3Q5K4L6 730 aa12.8□□□□□ -0.36
CHRNA9-201ENST00000310169 IL17REQ8NFR9 667 aa12.8□□□□□ -0.36
CHRNA9-201ENST00000310169 CCNL1Q9UK58 526 aaPredicted RBP12.8□□□□□ -0.36
CHRNA9-201ENST00000310169 KCNQ4P56696 695 aa12.79□□□□□ -0.36
CHRNA9-201ENST00000310169 MCM10Q7L590 875 aa12.79□□□□□ -0.36
CHRNA9-201ENST00000310169 ATG3Q9NT62 314 aa12.79□□□□□ -0.36
CHRNA9-201ENST00000310169 HTATSF1O43719 755 aaKnown RBP12.79□□□□□ -0.36
CHRNA9-201ENST00000310169 RIPK4P57078 832 aa12.79□□□□□ -0.36
CHRNA9-201ENST00000310169 PNISRQ8TF01 805 aaKnown RBP12.79□□□□□ -0.36
CHRNA9-201ENST00000310169 RBM42Q9BTD8 480 aaKnown RBP12.79□□□□□ -0.36
CHRNA9-201ENST00000310169 DLG5Q8TDM6 1919 aa12.78□□□□□ -0.36
CHRNA9-201ENST00000310169 DCTN1Q14203 1278 aa12.78□□□□□ -0.36
CHRNA9-201ENST00000310169 HMGB2P26583 209 aaKnown RBP12.78□□□□□ -0.36
CHRNA9-201ENST00000310169 TMPOP42166 694 aaKnown RBP12.78□□□□□ -0.36
CHRNA9-201ENST00000310169 LRRC4BQ9NT99 713 aa12.78□□□□□ -0.36
CHRNA9-201ENST00000310169 RRP7AQ9Y3A4 280 aaKnown RBP12.78□□□□□ -0.36
CHRNA9-201ENST00000310169 RREB1Q92766 1687 aa12.78□□□□□ -0.36
CHRNA9-201ENST00000310169 LOC102724428A0A0B4J2F2 783 aa12.77□□□□□ -0.36
CHRNA9-201ENST00000310169 PTCD1O75127 700 aaKnown RBP12.77□□□□□ -0.36
CHRNA9-201ENST00000310169 SIK1P57059 783 aa12.77□□□□□ -0.36
CHRNA9-201ENST00000310169 FAM9BQ8IZU0 186 aa12.77□□□□□ -0.36
CHRNA9-201ENST00000310169 LY75O60449 1722 aa12.77□□□□□ -0.37
CHRNA9-201ENST00000310169 ATP6V1AP38606 617 aa12.77□□□□□ -0.37
CHRNA9-201ENST00000310169 HNRNPUQ00839 825 aaKnown RBP eCLIP12.77□□□□□ -0.37
CHRNA9-201ENST00000310169 R3HDM1Q15032 1099 aaKnown RBP12.77□□□□□ -0.37
CHRNA9-201ENST00000310169 TTC5Q8N0Z6 440 aa12.77□□□□□ -0.37
CHRNA9-201ENST00000310169 STK32BQ9NY57 414 aa12.77□□□□□ -0.37
CHRNA9-201ENST00000310169 NUP188Q5SRE5 1749 aa12.76□□□□□ -0.37
CHRNA9-201ENST00000310169 PSDA5PKW4 1024 aaPredicted RBP12.76□□□□□ -0.37
CHRNA9-201ENST00000310169 LMOD3Q0VAK6 560 aa12.76□□□□□ -0.37
CHRNA9-201ENST00000310169 SLC39A6Q13433 755 aa12.76□□□□□ -0.37
CHRNA9-201ENST00000310169 BTBD11A6QL63 1104 aa12.76□□□□□ -0.37
CHRNA9-201ENST00000310169 APAF1O14727 1248 aa12.76□□□□□ -0.37
CHRNA9-201ENST00000310169 SALL2Q9Y467 1007 aaPredicted RBP12.76□□□□□ -0.37
CHRNA9-201ENST00000310169 CEMIPQ8WUJ3 1361 aa12.75□□□□□ -0.37
CHRNA9-201ENST00000310169 ADAMTS7Q9UKP4 1686 aa12.75□□□□□ -0.37
CHRNA9-201ENST00000310169 TAF7Q15545 349 aaPredicted RBP12.74□□□□□ -0.37
CHRNA9-201ENST00000310169 SLC15A2Q16348 729 aa12.74□□□□□ -0.37
CHRNA9-201ENST00000310169 THUMPD2Q9BTF0 503 aaKnown RBP12.74□□□□□ -0.37
CHRNA9-201ENST00000310169 TFCP2L1Q9NZI6 479 aa12.74□□□□□ -0.37
CHRNA9-201ENST00000310169 MRC1P22897 1456 aa12.74□□□□□ -0.37
CHRNA9-201ENST00000310169 ZNF790Q6PG37 636 aa12.73□□□□□ -0.37
CHRNA9-201ENST00000310169 RNF123Q5XPI4 1314 aa12.73□□□□□ -0.37
CHRNA9-201ENST00000310169 SENP3-EIF4A1A0A087X0R7 540 aa12.72□□□□□ -0.37
CHRNA9-201ENST00000310169 AK7Q96M32 723 aa12.72□□□□□ -0.37
CHRNA9-201ENST00000310169 MIS18AQ9NYP9 233 aa12.72□□□□□ -0.37
CHRNA9-201ENST00000310169 SIPA1L3O60292 1781 aaPredicted RBP12.71□□□□□ -0.37
CHRNA9-201ENST00000310169 C5P01031 1676 aa12.71□□□□□ -0.38
CHRNA9-201ENST00000310169 TAF1LQ8IZX4 1826 aa12.71□□□□□ -0.38
CHRNA9-201ENST00000310169 ITPK1Q13572 414 aa12.71□□□□□ -0.38
CHRNA9-201ENST00000310169 ZNF827Q17R98 1081 aa12.71□□□□□ -0.38
CHRNA9-201ENST00000310169 FMNL2Q96PY5 1086 aa12.71□□□□□ -0.38
CHRNA9-201ENST00000310169 SLC4A9Q96Q91 983 aa12.71□□□□□ -0.38
CHRNA9-201ENST00000310169 LAS1LQ9Y4W2 734 aaKnown RBP12.71□□□□□ -0.38
CHRNA9-201ENST00000310169 LINC00116Q8NCU8 138 aa12.7□□□□□ -0.38
CHRNA9-201ENST00000310169 AKT1S1Q96B36 256 aa12.7□□□□□ -0.38
CHRNA9-201ENST00000310169 TRIM35Q9UPQ4 493 aa12.7□□□□□ -0.38
CHRNA9-201ENST00000310169 ZNF496Q96IT1 587 aaPredicted RBP12.69□□□□□ -0.38
CHRNA9-201ENST00000310169 PKNOX2Q96KN3 472 aa12.69□□□□□ -0.38
CHRNA9-201ENST00000310169 PODXL2Q9NZ53 605 aa12.69□□□□□ -0.38
CHRNA9-201ENST00000310169 KCNQ3O43525 872 aa12.69□□□□□ -0.38
CHRNA9-201ENST00000310169 VSIG10Q8N0Z9 540 aa12.69□□□□□ -0.38
CHRNA9-201ENST00000310169 CCDC136Q96JN2 1154 aa12.69□□□□□ -0.38
CHRNA9-201ENST00000310169 TSPYL4Q9UJ04 414 aa12.69□□□□□ -0.38
CHRNA9-201ENST00000310169 NOP58Q9Y2X3 529 aaKnown RBP12.69□□□□□ -0.38
CHRNA9-201ENST00000310169 PAPPAQ13219 1627 aa12.68□□□□□ -0.38
CHRNA9-201ENST00000310169 GNPATO15228 680 aa12.68□□□□□ -0.38
CHRNA9-201ENST00000310169 STARD3NLO95772 234 aa12.68□□□□□ -0.38
CHRNA9-201ENST00000310169 CALD1Q05682 793 aaKnown RBP12.68□□□□□ -0.38
CHRNA9-201ENST00000310169 DNAJC10Q8IXB1 793 aa12.68□□□□□ -0.38
CHRNA9-201ENST00000310169 C4BP0C0L5 1744 aa12.68□□□□□ -0.38
CHRNA9-201ENST00000310169 PHF14O94880 888 aa12.67□□□□□ -0.38
CHRNA9-201ENST00000310169 TEX13AQ9BXU3 409 aaPredicted RBP12.67□□□□□ -0.38
CHRNA9-201ENST00000310169 FLAD1Q8NFF5 587 aa12.67□□□□□ -0.38
CHRNA9-201ENST00000310169 RTCBQ9Y3I0 505 aaKnown RBP12.67□□□□□ -0.38
CHRNA9-201ENST00000310169 ZNF831Q5JPB2 1677 aa12.67□□□□□ -0.38
CHRNA9-201ENST00000310169 KCPQ6ZWJ8 1503 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms