RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 CHL1O00533 1208 aa7.38□□□□□ -1.23
SEC22A-201ENST00000309934 UBTFL1P0CB47 393 aaPredicted RBP7.38□□□□□ -1.23
SEC22A-201ENST00000309934 C9orf78Q9NZ63 289 aaPredicted RBP7.38□□□□□ -1.23
SEC22A-201ENST00000309934 CD163L1Q9NR16 1453 aa7.37□□□□□ -1.23
SEC22A-201ENST00000309934 USP19O94966 1318 aa7.37□□□□□ -1.23
SEC22A-201ENST00000309934 MBIPQ9NS73 344 aa7.37□□□□□ -1.23
SEC22A-201ENST00000309934 BRPF3Q9ULD4 1205 aa7.37□□□□□ -1.23
SEC22A-201ENST00000309934 SPATA31A3Q5VYP0 1347 aa7.37□□□□□ -1.23
SEC22A-201ENST00000309934 MAPK8IP2Q13387 824 aaPredicted RBP7.37□□□□□ -1.23
SEC22A-201ENST00000309934 TUBGCP6Q96RT7 1819 aa7.37□□□□□ -1.23
SEC22A-201ENST00000309934 RAB11FIP3O75154 756 aa7.37□□□□□ -1.23
SEC22A-201ENST00000309934 STARD3NLO95772 234 aa7.37□□□□□ -1.23
SEC22A-201ENST00000309934 SLC4A2P04920 1241 aa7.37□□□□□ -1.23
SEC22A-201ENST00000309934 IL2RBP14784 551 aa7.37□□□□□ -1.23
SEC22A-201ENST00000309934 HSPA2P54652 639 aa7.37□□□□□ -1.23
SEC22A-201ENST00000309934 ZC3H6P61129 1189 aaKnown RBP7.37□□□□□ -1.23
SEC22A-201ENST00000309934 LARP1Q6PKG0 1096 aaKnown RBP7.37□□□□□ -1.23
SEC22A-201ENST00000309934 SLC4A10Q6U841 1118 aa7.37□□□□□ -1.23
SEC22A-201ENST00000309934 KIF6Q6ZMV9 814 aa7.37□□□□□ -1.23
SEC22A-201ENST00000309934 CNPY4Q8N129 248 aa7.37□□□□□ -1.23
SEC22A-201ENST00000309934 TSR2Q969E8 191 aaKnown RBP7.37□□□□□ -1.23
SEC22A-201ENST00000309934 RGS3P49796 1198 aa7.36□□□□□ -1.23
SEC22A-201ENST00000309934 HDAC1Q13547 482 aaPredicted RBP7.36□□□□□ -1.23
SEC22A-201ENST00000309934 ZCRB1Q8TBF4 217 aaKnown RBP7.36□□□□□ -1.23
SEC22A-201ENST00000309934 SSH1Q8WYL5 1049 aa7.36□□□□□ -1.23
SEC22A-201ENST00000309934 SMARCC1Q92922 1105 aaPredicted RBP7.36□□□□□ -1.23
SEC22A-201ENST00000309934 ERC2O15083 957 aa7.36□□□□□ -1.23
SEC22A-201ENST00000309934 ALDH1L1O75891 902 aa7.36□□□□□ -1.23
SEC22A-201ENST00000309934 IQSEC2Q5JU85 1478 aa7.36□□□□□ -1.23
SEC22A-201ENST00000309934 A0A0G2JS52 829 aa7.36□□□□□ -1.23
SEC22A-201ENST00000309934 RUFY2Q8WXA3 655 aa7.36□□□□□ -1.23
SEC22A-201ENST00000309934 ORAI2Q96SN7 254 aa7.36□□□□□ -1.23
SEC22A-201ENST00000309934 TRIM35Q9UPQ4 493 aa7.36□□□□□ -1.23
SEC22A-201ENST00000309934 AKAP12Q02952 1782 aa7.36□□□□□ -1.23
SEC22A-201ENST00000309934 MARF1Q9Y4F3 1742 aaKnown RBP7.36□□□□□ -1.23
SEC22A-201ENST00000309934 SNRPA1P09661 255 aaKnown RBP7.35□□□□□ -1.23
SEC22A-201ENST00000309934 PIP4K2BP78356 416 aa7.35□□□□□ -1.23
SEC22A-201ENST00000309934 MTHFSDQ2M296 383 aaKnown RBP7.35□□□□□ -1.23
SEC22A-201ENST00000309934 RIC3Q7Z5B4 369 aa7.35□□□□□ -1.23
SEC22A-201ENST00000309934 A0A087WZG4 1122 aa7.35□□□□□ -1.23
SEC22A-201ENST00000309934 ERVV-2B6SEH9 535 aa7.35□□□□□ -1.23
SEC22A-201ENST00000309934 HIP1O00291 1037 aa7.35□□□□□ -1.23
SEC22A-201ENST00000309934 EXOC5O00471 708 aa7.35□□□□□ -1.23
SEC22A-201ENST00000309934 PLIN1O60240 522 aa7.35□□□□□ -1.23
SEC22A-201ENST00000309934 IPO4Q8TEX9 1081 aaKnown RBP7.35□□□□□ -1.23
SEC22A-201ENST00000309934 ZFP91Q96JP5 570 aaPredicted RBP7.35□□□□□ -1.23
SEC22A-201ENST00000309934 TMOD3Q9NYL9 352 aa7.35□□□□□ -1.23
SEC22A-201ENST00000309934 THRAP3Q9Y2W1 955 aaKnown RBP7.35□□□□□ -1.23
SEC22A-201ENST00000309934 KDRP35968 1356 aa7.35□□□□□ -1.23
SEC22A-201ENST00000309934 CPDO75976 1380 aa7.35□□□□□ -1.23
SEC22A-201ENST00000309934 BCAR3O75815 825 aa7.35□□□□□ -1.23
SEC22A-201ENST00000309934 MRPL50Q8N5N7 158 aaKnown RBP7.35□□□□□ -1.23
SEC22A-201ENST00000309934 N4BP2Q86UW6 1770 aaPredicted RBP7.35□□□□□ -1.23
SEC22A-201ENST00000309934 RNMTO43148 476 aaKnown RBP7.35□□□□□ -1.23
SEC22A-201ENST00000309934 IRX3P78415 501 aaPredicted RBP7.35□□□□□ -1.23
SEC22A-201ENST00000309934 KIAA1211Q6ZU35 1233 aa7.35□□□□□ -1.23
SEC22A-201ENST00000309934 SSH2Q76I76 1423 aa7.34□□□□□ -1.23
SEC22A-201ENST00000309934 COL3A1P02461 1466 aaPredicted RBP7.34□□□□□ -1.23
SEC22A-201ENST00000309934 REC8O95072 547 aa7.34□□□□□ -1.23
SEC22A-201ENST00000309934 EIF2S2P20042 333 aaKnown RBP7.34□□□□□ -1.23
SEC22A-201ENST00000309934 FAM193AP78312 1265 aa7.34□□□□□ -1.23
SEC22A-201ENST00000309934 AEBP1Q8IUX7 1158 aa7.34□□□□□ -1.23
SEC22A-201ENST00000309934 PANK1Q8TE04 598 aa7.34□□□□□ -1.23
SEC22A-201ENST00000309934 PLCD4Q9BRC7 762 aa7.34□□□□□ -1.23
SEC22A-201ENST00000309934 CARD10Q9BWT7 1032 aa7.34□□□□□ -1.23
SEC22A-201ENST00000309934 ZRANB1Q9UGI0 708 aa7.34□□□□□ -1.23
SEC22A-201ENST00000309934 TOPAZ1Q8N9V7 1692 aa7.34□□□□□ -1.23
SEC22A-201ENST00000309934 ELL2O00472 640 aaPredicted RBP7.34□□□□□ -1.23
SEC22A-201ENST00000309934 VAMP4O75379 141 aa7.34□□□□□ -1.23
SEC22A-201ENST00000309934 CERKQ8TCT0 537 aa7.34□□□□□ -1.23
SEC22A-201ENST00000309934 BCL2L13Q9BXK5 485 aa7.34□□□□□ -1.23
SEC22A-201ENST00000309934 CHD2O14647 1828 aaKnown RBP7.34□□□□□ -1.23
SEC22A-201ENST00000309934 ZNF853P0CG23 659 aa7.34□□□□□ -1.24
SEC22A-201ENST00000309934 XPCQ01831 940 aaPredicted RBP7.34□□□□□ -1.24
SEC22A-201ENST00000309934 G3BP1Q13283 466 aaKnown RBP eCLIP7.34□□□□□ -1.24
SEC22A-201ENST00000309934 MCM10Q7L590 875 aa7.34□□□□□ -1.24
SEC22A-201ENST00000309934 MST1RQ04912 1400 aa7.33□□□□□ -1.24
SEC22A-201ENST00000309934 STRN4Q9NRL3 753 aa7.33□□□□□ -1.24
SEC22A-201ENST00000309934 SENP3-EIF4A1A0A087X0R7 540 aa7.33□□□□□ -1.24
SEC22A-201ENST00000309934 HSCBQ8IWL3 235 aa7.33□□□□□ -1.24
SEC22A-201ENST00000309934 PSMD1Q99460 953 aa7.33□□□□□ -1.24
SEC22A-201ENST00000309934 SAMD1Q6SPF0 538 aaPredicted RBP7.33□□□□□ -1.24
SEC22A-201ENST00000309934 WDR17Q8IZU2 1322 aa7.33□□□□□ -1.24
SEC22A-201ENST00000309934 GOLGA6L22H0YM25 854 aa7.32□□□□□ -1.24
SEC22A-201ENST00000309934 TRIM27P14373 513 aa7.32□□□□□ -1.24
SEC22A-201ENST00000309934 ANKRD45Q5TZF3 282 aa7.32□□□□□ -1.24
SEC22A-201ENST00000309934 INTS3Q68E01 1043 aaKnown RBP7.32□□□□□ -1.24
SEC22A-201ENST00000309934 TMX4Q9H1E5 349 aaPredicted RBP7.32□□□□□ -1.24
SEC22A-201ENST00000309934 ZNF652Q9Y2D9 606 aa7.32□□□□□ -1.24
SEC22A-201ENST00000309934 FLIIQ13045 1269 aa7.32□□□□□ -1.24
SEC22A-201ENST00000309934 PDE4AP27815 886 aa7.32□□□□□ -1.24
SEC22A-201ENST00000309934 BRINP3Q76B58 766 aa7.32□□□□□ -1.24
SEC22A-201ENST00000309934 DNAAF4Q8WXU2 420 aa7.32□□□□□ -1.24
SEC22A-201ENST00000309934 PHACTR3Q96KR7 559 aa7.32□□□□□ -1.24
SEC22A-201ENST00000309934 ERBB3P21860 1342 aa7.32□□□□□ -1.24
SEC22A-201ENST00000309934 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.32□□□□□ -1.24
SEC22A-201ENST00000309934 TMEM57Q8N5G2 664 aa7.32□□□□□ -1.24
SEC22A-201ENST00000309934 NRKQ7Z2Y5 1582 aa7.31□□□□□ -1.24
SEC22A-201ENST00000309934 CDC45O75419 566 aa7.31□□□□□ -1.24
SEC22A-201ENST00000309934 MFAP1P55081 439 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms