RNA–Protein interactions for RNA: ENST00000308783.9

KDM2A-201, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 3,666 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-201ENST00000308783 ZNF526Q8TF50 670 aaPredicted RBP12.99□□□□□ -0.33
KDM2A-201ENST00000308783 MVPQ14764 893 aaKnown RBP12.99□□□□□ -0.33
KDM2A-201ENST00000308783 ARHGEF25Q86VW2 580 aa12.99□□□□□ -0.33
KDM2A-201ENST00000308783 CENPQQ7L2Z9 268 aaPredicted RBP12.98□□□□□ -0.33
KDM2A-201ENST00000308783 KCNH5Q8NCM2 988 aa12.98□□□□□ -0.33
KDM2A-201ENST00000308783 USP54Q70EL1 1684 aa12.98□□□□□ -0.33
KDM2A-201ENST00000308783 RGPD2P0DJD1 1756 aa12.98□□□□□ -0.33
KDM2A-201ENST00000308783 CHL1O00533 1208 aa12.98□□□□□ -0.33
KDM2A-201ENST00000308783 RTF1Q92541 710 aaKnown RBP12.98□□□□□ -0.33
KDM2A-201ENST00000308783 MRPL50Q8N5N7 158 aaKnown RBP12.97□□□□□ -0.33
KDM2A-201ENST00000308783 PANK2Q9BZ23 570 aa12.97□□□□□ -0.33
KDM2A-201ENST00000308783 RNF216Q9NWF9 866 aaPredicted RBP12.97□□□□□ -0.33
KDM2A-201ENST00000308783 CRB1P82279 1406 aa12.97□□□□□ -0.33
KDM2A-201ENST00000308783 TRPM3Q9HCF6 1732 aaPredicted RBP12.97□□□□□ -0.33
KDM2A-201ENST00000308783 PDE4AP27815 886 aa12.97□□□□□ -0.33
KDM2A-201ENST00000308783 TPRNQ4KMQ1 711 aa12.97□□□□□ -0.33
KDM2A-201ENST00000308783 CADPS2Q86UW7 1296 aa12.97□□□□□ -0.33
KDM2A-201ENST00000308783 IL17REQ8NFR9 667 aa12.97□□□□□ -0.33
KDM2A-201ENST00000308783 MSH6P52701 1360 aa12.96□□□□□ -0.34
KDM2A-201ENST00000308783 KIF24Q5T7B8 1368 aa12.96□□□□□ -0.34
KDM2A-201ENST00000308783 GOLGA6L3A6NEY3 463 aa12.95□□□□□ -0.34
KDM2A-201ENST00000308783 ALDH1L2Q3SY69 923 aa12.95□□□□□ -0.34
KDM2A-201ENST00000308783 ESPNB1AK53 854 aa12.95□□□□□ -0.34
KDM2A-201ENST00000308783 CHRNA2Q15822 529 aa12.95□□□□□ -0.34
KDM2A-201ENST00000308783 CCDC9Q9Y3X0 531 aaKnown RBP12.95□□□□□ -0.34
KDM2A-201ENST00000308783 XIRP1Q702N8 1843 aaKnown RBP12.95□□□□□ -0.34
KDM2A-201ENST00000308783 GAS2L2Q8NHY3 880 aa12.95□□□□□ -0.34
KDM2A-201ENST00000308783 ANKRD24Q8TF21 1146 aa12.95□□□□□ -0.34
KDM2A-201ENST00000308783 TSPYL4Q9UJ04 414 aa12.95□□□□□ -0.34
KDM2A-201ENST00000308783 USP19O94966 1318 aa12.95□□□□□ -0.34
KDM2A-201ENST00000308783 GNAT3A8MTJ3 354 aa12.94□□□□□ -0.34
KDM2A-201ENST00000308783 BRINP3Q76B58 766 aa12.94□□□□□ -0.34
KDM2A-201ENST00000308783 RTL1A6NKG5 1358 aa12.94□□□□□ -0.34
KDM2A-201ENST00000308783 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.94□□□□□ -0.34
KDM2A-201ENST00000308783 MED1Q15648 1581 aaPredicted RBP12.94□□□□□ -0.34
KDM2A-201ENST00000308783 NECTIN2Q92692 538 aa12.94□□□□□ -0.34
KDM2A-201ENST00000308783 LGR6Q9HBX8 967 aa12.94□□□□□ -0.34
KDM2A-201ENST00000308783 KIF16BQ96L93 1317 aa12.94□□□□□ -0.34
KDM2A-201ENST00000308783 IGSF3O75054 1194 aa12.93□□□□□ -0.34
KDM2A-201ENST00000308783 MAP7D2Q96T17 732 aa12.93□□□□□ -0.34
KDM2A-201ENST00000308783 C1orf115Q9H7X2 142 aa12.93□□□□□ -0.34
KDM2A-201ENST00000308783 TAOK2Q9UL54 1235 aa12.93□□□□□ -0.34
KDM2A-201ENST00000308783 SLIT3O75094 1523 aa12.93□□□□□ -0.34
KDM2A-201ENST00000308783 RGPD5Q99666 1765 aa12.92□□□□□ -0.34
KDM2A-201ENST00000308783 R3HCC1Q9Y3T6 440 aaKnown RBP12.92□□□□□ -0.34
KDM2A-201ENST00000308783 IPO8O15397 1037 aaKnown RBP12.92□□□□□ -0.34
KDM2A-201ENST00000308783 KIF1AQ12756 1690 aa12.91□□□□□ -0.34
KDM2A-201ENST00000308783 NPHP3Q7Z494 1330 aa12.91□□□□□ -0.34
KDM2A-201ENST00000308783 DMTNQ08495 405 aa12.91□□□□□ -0.34
KDM2A-201ENST00000308783 MPRIPQ6WCQ1 1025 aa12.91□□□□□ -0.34
KDM2A-201ENST00000308783 SLAIN2Q9P270 581 aa12.91□□□□□ -0.34
KDM2A-201ENST00000308783 ALS2Q96Q42 1657 aa12.91□□□□□ -0.34
KDM2A-201ENST00000308783 DCCP43146 1447 aa12.91□□□□□ -0.34
KDM2A-201ENST00000308783 MAP3K5Q99683 1374 aa12.91□□□□□ -0.34
KDM2A-201ENST00000308783 CHRM1P11229 460 aaPredicted RBP12.91□□□□□ -0.34
KDM2A-201ENST00000308783 CBX1P83916 185 aa12.9□□□□□ -0.34
KDM2A-201ENST00000308783 DDX19BQ9UMR2 479 aa12.9□□□□□ -0.34
KDM2A-201ENST00000308783 ZBTB40Q9NUA8 1239 aa12.9□□□□□ -0.34
KDM2A-201ENST00000308783 BRPF1P55201 1214 aaPredicted RBP12.9□□□□□ -0.35
KDM2A-201ENST00000308783 G2E3Q7L622 706 aa12.9□□□□□ -0.35
KDM2A-201ENST00000308783 ZNF428Q96B54 188 aa12.9□□□□□ -0.35
KDM2A-201ENST00000308783 ERBB3P21860 1342 aa12.89□□□□□ -0.35
KDM2A-201ENST00000308783 SLC4A2P04920 1241 aa12.89□□□□□ -0.35
KDM2A-201ENST00000308783 SPATA31A3Q5VYP0 1347 aa12.89□□□□□ -0.35
KDM2A-201ENST00000308783 KCNQ3O43525 872 aa12.89□□□□□ -0.35
KDM2A-201ENST00000308783 FAM43BQ6ZT52 329 aaPredicted RBP12.89□□□□□ -0.35
KDM2A-201ENST00000308783 PXDNQ92626 1479 aa12.89□□□□□ -0.35
KDM2A-201ENST00000308783 NCOA3Q9Y6Q9 1424 aa12.89□□□□□ -0.35
KDM2A-201ENST00000308783 ZNF530Q6P9A1 599 aaPredicted RBP12.89□□□□□ -0.35
KDM2A-201ENST00000308783 BACH2Q9BYV9 841 aa12.89□□□□□ -0.35
KDM2A-201ENST00000308783 NLRP2Q9NX02 1062 aa12.89□□□□□ -0.35
KDM2A-201ENST00000308783 XRCC6P12956 609 aaKnown RBP eCLIP12.88□□□□□ -0.35
KDM2A-201ENST00000308783 ZBTB7BO15156 539 aaPredicted RBP12.88□□□□□ -0.35
KDM2A-201ENST00000308783 MS4A1P11836 297 aa12.88□□□□□ -0.35
KDM2A-201ENST00000308783 CLGNO14967 610 aa12.87□□□□□ -0.35
KDM2A-201ENST00000308783 KIAA0232Q92628 1395 aa12.87□□□□□ -0.35
KDM2A-201ENST00000308783 TNS3Q68CZ2 1445 aa12.87□□□□□ -0.35
KDM2A-201ENST00000308783 PDZRN3Q9UPQ7 1066 aa12.87□□□□□ -0.35
KDM2A-201ENST00000308783 F6X3S4 739 aa12.87□□□□□ -0.35
KDM2A-201ENST00000308783 PTMAP06454 111 aaKnown RBP12.87□□□□□ -0.35
KDM2A-201ENST00000308783 KCNJ4P48050 445 aa12.87□□□□□ -0.35
KDM2A-201ENST00000308783 TAF7Q15545 349 aaPredicted RBP12.87□□□□□ -0.35
KDM2A-201ENST00000308783 PTMSP20962 102 aa12.86□□□□□ -0.35
KDM2A-201ENST00000308783 ZNF771Q7L3S4 317 aaPredicted RBP12.86□□□□□ -0.35
KDM2A-201ENST00000308783 ABCC4O15439 1325 aa12.86□□□□□ -0.35
KDM2A-201ENST00000308783 PHRF1Q9P1Y6 1649 aaKnown RBP12.86□□□□□ -0.35
KDM2A-201ENST00000308783 HTATSF1O43719 755 aaKnown RBP12.86□□□□□ -0.35
KDM2A-201ENST00000308783 ARHGAP45Q92619 1136 aa12.86□□□□□ -0.35
KDM2A-201ENST00000308783 SLKQ9H2G2 1235 aaPredicted RBP12.86□□□□□ -0.35
KDM2A-201ENST00000308783 CSB-PGBD3P0DP91 1061 aa12.86□□□□□ -0.35
KDM2A-201ENST00000308783 SPRYD3Q8NCJ5 442 aa12.85□□□□□ -0.35
KDM2A-201ENST00000308783 RWDD1Q9H446 243 aaPredicted RBP12.85□□□□□ -0.35
KDM2A-201ENST00000308783 RGS12O14924 1447 aa12.85□□□□□ -0.35
KDM2A-201ENST00000308783 OS9Q13438 667 aaPredicted RBP12.84□□□□□ -0.35
KDM2A-201ENST00000308783 PLEKHO1Q53GL0 409 aaPredicted RBP12.84□□□□□ -0.35
KDM2A-201ENST00000308783 ZNF592Q92610 1267 aa12.84□□□□□ -0.35
KDM2A-201ENST00000308783 C8orf34Q49A92 452 aa12.84□□□□□ -0.35
KDM2A-201ENST00000308783 CEMIPQ8WUJ3 1361 aa12.84□□□□□ -0.35
KDM2A-201ENST00000308783 LRRC37A3O60309 1634 aa12.84□□□□□ -0.35
KDM2A-201ENST00000308783 SLC4A10Q6U841 1118 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms