RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 ANKRD1Q15327 319 aa13.66□□□□□ -0.22
PCDHGC3-201ENST00000308177 BLOC1S2Q6QNY1 142 aa13.66□□□□□ -0.22
PCDHGC3-201ENST00000308177 ANKRD44Q8N8A2 993 aa13.66□□□□□ -0.22
PCDHGC3-201ENST00000308177 TBC1D32Q96NH3 1257 aa13.66□□□□□ -0.22
PCDHGC3-201ENST00000308177 TRIM35Q9UPQ4 493 aa13.66□□□□□ -0.22
PCDHGC3-201ENST00000308177 FKBP4Q02790 459 aaKnown RBP eCLIP13.66□□□□□ -0.22
PCDHGC3-201ENST00000308177 CCDC73Q6ZRK6 1079 aa13.66□□□□□ -0.22
PCDHGC3-201ENST00000308177 PPP1R42Q7Z4L9 355 aa13.66□□□□□ -0.22
PCDHGC3-201ENST00000308177 JAKMIP1Q96N16 626 aaKnown RBP13.66□□□□□ -0.22
PCDHGC3-201ENST00000308177 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.66□□□□□ -0.22
PCDHGC3-201ENST00000308177 CCDC85AQ96PX6 553 aaPredicted RBP13.66□□□□□ -0.22
PCDHGC3-201ENST00000308177 ZBTB40Q9NUA8 1239 aa13.66□□□□□ -0.22
PCDHGC3-201ENST00000308177 MYOM2P54296 1465 aa13.66□□□□□ -0.22
PCDHGC3-201ENST00000308177 NPHP3Q7Z494 1330 aa13.66□□□□□ -0.22
PCDHGC3-201ENST00000308177 MPHOSPH8Q99549 860 aa13.66□□□□□ -0.22
PCDHGC3-201ENST00000308177 C19orf44Q9H6X5 657 aa13.66□□□□□ -0.22
PCDHGC3-201ENST00000308177 ERVK-7P63135 1459 aa13.65□□□□□ -0.22
PCDHGC3-201ENST00000308177 WDR33Q9C0J8 1336 aaKnown RBP13.65□□□□□ -0.22
PCDHGC3-201ENST00000308177 SAFBQ15424 915 aaKnown RBP eCLIP13.65□□□□□ -0.22
PCDHGC3-201ENST00000308177 AKAP4Q5JQC9 854 aa13.65□□□□□ -0.22
PCDHGC3-201ENST00000308177 LRRC59Q96AG4 307 aaKnown RBP13.65□□□□□ -0.22
PCDHGC3-201ENST00000308177 UPF3BQ9BZI7 483 aaKnown RBP13.65□□□□□ -0.22
PCDHGC3-201ENST00000308177 FIBPO43427 364 aa13.65□□□□□ -0.22
PCDHGC3-201ENST00000308177 HOXC9P31274 260 aa13.65□□□□□ -0.22
PCDHGC3-201ENST00000308177 NASPP49321 788 aaPredicted RBP13.65□□□□□ -0.22
PCDHGC3-201ENST00000308177 KDM5AP29375 1690 aaKnown RBP13.65□□□□□ -0.22
PCDHGC3-201ENST00000308177 GCP02774 474 aa13.65□□□□□ -0.22
PCDHGC3-201ENST00000308177 BOLA2Q9H3K6 86 aa13.65□□□□□ -0.22
PCDHGC3-201ENST00000308177 CHPF2Q9P2E5 772 aa13.65□□□□□ -0.22
PCDHGC3-201ENST00000308177 A0A087WZG4 1122 aa13.64□□□□□ -0.23
PCDHGC3-201ENST00000308177 C8orf34Q49A92 452 aa13.64□□□□□ -0.23
PCDHGC3-201ENST00000308177 TTC22Q5TAA0 569 aa13.64□□□□□ -0.23
PCDHGC3-201ENST00000308177 CREBRFQ8IUR6 639 aa13.64□□□□□ -0.23
PCDHGC3-201ENST00000308177 MARCH6O60337 910 aa13.64□□□□□ -0.23
PCDHGC3-201ENST00000308177 NCBP3Q53F19 620 aaKnown RBP13.64□□□□□ -0.23
PCDHGC3-201ENST00000308177 PDRG1Q9NUG6 133 aa13.64□□□□□ -0.23
PCDHGC3-201ENST00000308177 MSH6P52701 1360 aa13.64□□□□□ -0.23
PCDHGC3-201ENST00000308177 SASS6Q6UVJ0 657 aa13.64□□□□□ -0.23
PCDHGC3-201ENST00000308177 SIRT1Q96EB6 747 aa13.64□□□□□ -0.23
PCDHGC3-201ENST00000308177 PLXNC1O60486 1568 aa13.64□□□□□ -0.23
PCDHGC3-201ENST00000308177 LTKP29376 864 aa13.64□□□□□ -0.23
PCDHGC3-201ENST00000308177 CCDC8Q9H0W5 538 aaPredicted RBP13.64□□□□□ -0.23
PCDHGC3-201ENST00000308177 PIP4K2BP78356 416 aa13.63□□□□□ -0.23
PCDHGC3-201ENST00000308177 RNF214Q8ND24 703 aa13.63□□□□□ -0.23
PCDHGC3-201ENST00000308177 SNRPA1P09661 255 aaKnown RBP13.63□□□□□ -0.23
PCDHGC3-201ENST00000308177 STK3Q13188 491 aa13.63□□□□□ -0.23
PCDHGC3-201ENST00000308177 SART3Q15020 963 aaKnown RBP13.63□□□□□ -0.23
PCDHGC3-201ENST00000308177 SMC5Q8IY18 1101 aa13.63□□□□□ -0.23
PCDHGC3-201ENST00000308177 PLEKHG3A1L390 1219 aa13.63□□□□□ -0.23
PCDHGC3-201ENST00000308177 DHX16O60231 1041 aaKnown RBP13.63□□□□□ -0.23
PCDHGC3-201ENST00000308177 PRDM15P57071 1507 aaPredicted RBP13.63□□□□□ -0.23
PCDHGC3-201ENST00000308177 IP6K1Q92551 441 aa13.62□□□□□ -0.23
PCDHGC3-201ENST00000308177 ZSCAN31Q96LW9 406 aaPredicted RBP13.62□□□□□ -0.23
PCDHGC3-201ENST00000308177 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.62□□□□□ -0.23
PCDHGC3-201ENST00000308177 KRT32Q14532 448 aa13.62□□□□□ -0.23
PCDHGC3-201ENST00000308177 GNL3LQ9NVN8 582 aaKnown RBP13.62□□□□□ -0.23
PCDHGC3-201ENST00000308177 ECHDC1Q9NTX5 307 aa13.62□□□□□ -0.23
PCDHGC3-201ENST00000308177 CASTP20810 708 aaKnown RBP13.62□□□□□ -0.23
PCDHGC3-201ENST00000308177 TSHZ3Q63HK5 1081 aa13.62□□□□□ -0.23
PCDHGC3-201ENST00000308177 ZSCAN25Q6NSZ9 544 aa13.61□□□□□ -0.23
PCDHGC3-201ENST00000308177 FBXW7Q969H0 707 aa13.61□□□□□ -0.23
PCDHGC3-201ENST00000308177 MAP3K5Q99683 1374 aa13.61□□□□□ -0.23
PCDHGC3-201ENST00000308177 LARP1BQ659C4 914 aaKnown RBP13.61□□□□□ -0.23
PCDHGC3-201ENST00000308177 ARAP3Q8WWN8 1544 aa13.61□□□□□ -0.23
PCDHGC3-201ENST00000308177 SBNO1A3KN83 1393 aa13.61□□□□□ -0.23
PCDHGC3-201ENST00000308177 ZBTB3Q9H5J0 574 aa13.61□□□□□ -0.23
PCDHGC3-201ENST00000308177 SLC39A6Q13433 755 aa13.61□□□□□ -0.23
PCDHGC3-201ENST00000308177 ATP5J2-PTCD1G3V325 749 aa13.6□□□□□ -0.23
PCDHGC3-201ENST00000308177 PRPF40BQ6NWY9 871 aaKnown RBP13.6□□□□□ -0.23
PCDHGC3-201ENST00000308177 ANKRD13DQ6ZTN6 518 aa13.6□□□□□ -0.23
PCDHGC3-201ENST00000308177 RHPN1Q8TCX5 695 aa13.6□□□□□ -0.23
PCDHGC3-201ENST00000308177 ADAMTS2O95450 1211 aa13.6□□□□□ -0.23
PCDHGC3-201ENST00000308177 TPD52L1Q16890 204 aaPredicted RBP13.6□□□□□ -0.23
PCDHGC3-201ENST00000308177 RRP12Q5JTH9 1297 aaKnown RBP13.6□□□□□ -0.23
PCDHGC3-201ENST00000308177 UBE3BQ7Z3V4 1068 aa13.6□□□□□ -0.23
PCDHGC3-201ENST00000308177 DCTPP1Q9H773 170 aa13.6□□□□□ -0.23
PCDHGC3-201ENST00000308177 CTNNA3Q9UI47 895 aa13.6□□□□□ -0.23
PCDHGC3-201ENST00000308177 IQGAP3Q86VI3 1631 aa13.6□□□□□ -0.23
PCDHGC3-201ENST00000308177 SDSP20132 328 aa13.6□□□□□ -0.23
PCDHGC3-201ENST00000308177 ATP8B2P98198 1209 aa13.6□□□□□ -0.23
PCDHGC3-201ENST00000308177 METTL24Q5JXM2 366 aa13.6□□□□□ -0.23
PCDHGC3-201ENST00000308177 SDF4Q9BRK5 362 aa13.6□□□□□ -0.23
PCDHGC3-201ENST00000308177 HECW2Q9P2P5 1572 aa13.6□□□□□ -0.23
PCDHGC3-201ENST00000308177 CABLES1Q8TDN4 633 aa13.59□□□□□ -0.23
PCDHGC3-201ENST00000308177 AKAP2Q9Y2D5 859 aa13.59□□□□□ -0.23
PCDHGC3-201ENST00000308177 EXOC5O00471 708 aa13.59□□□□□ -0.23
PCDHGC3-201ENST00000308177 ZBTB7BO15156 539 aaPredicted RBP13.59□□□□□ -0.23
PCDHGC3-201ENST00000308177 HOOK1Q9UJC3 728 aaKnown RBP13.59□□□□□ -0.23
PCDHGC3-201ENST00000308177 PDE1AP54750 535 aa13.59□□□□□ -0.23
PCDHGC3-201ENST00000308177 CHL1O00533 1208 aa13.59□□□□□ -0.23
PCDHGC3-201ENST00000308177 LETM1O95202 739 aaPredicted RBP13.59□□□□□ -0.23
PCDHGC3-201ENST00000308177 CEP85Q6P2H3 762 aa13.59□□□□□ -0.23
PCDHGC3-201ENST00000308177 AEBP2Q6ZN18 517 aaPredicted RBP13.59□□□□□ -0.23
PCDHGC3-201ENST00000308177 NACAP1Q9BZK3 213 aa13.59□□□□□ -0.23
PCDHGC3-201ENST00000308177 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.59□□□□□ -0.23
PCDHGC3-201ENST00000308177 RAD21O60216 631 aa13.58□□□□□ -0.23
PCDHGC3-201ENST00000308177 KSR2Q6VAB6 950 aa13.58□□□□□ -0.23
PCDHGC3-201ENST00000308177 SYNMO15061 1565 aa13.58□□□□□ -0.24
PCDHGC3-201ENST00000308177 ALDH1L1O75891 902 aa13.58□□□□□ -0.24
PCDHGC3-201ENST00000308177 TRIM34Q9BYJ4 488 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms