RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 QSER1Q2KHR3 1735 aa14.52□□□□□ -0.08
CSPG4P2Y-201ENST00000306853 HMGB2P26583 209 aaKnown RBP14.52□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 NFE2L2Q16236 605 aa14.52□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 CCDC146Q8IYE0 955 aa14.52□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 RUNDC1Q96C34 613 aa14.52□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 LGR6Q9HBX8 967 aa14.52□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 CCNL1Q9UK58 526 aaPredicted RBP14.52□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 ADAMTS8Q9UP79 889 aa14.52□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 HTATSF1O43719 755 aaKnown RBP14.51□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 DIEXFQ68CQ4 756 aaKnown RBP14.51□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 NFATC2IPQ8NCF5 419 aa14.51□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 COL5A3P25940 1745 aaPredicted RBP14.51□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 C4BP0C0L5 1744 aa14.5□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 LMOD3Q0VAK6 560 aa14.5□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 CCDC184Q52MB2 194 aa14.5□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 STK32BQ9NY57 414 aa14.5□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 ASAP1Q9ULH1 1129 aa14.5□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 CICQ96RK0 1608 aaPredicted RBP14.5□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 CEMIPQ8WUJ3 1361 aa14.49□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 MCM10Q7L590 875 aa14.49□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 PROM2Q8N271 834 aa14.49□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 RBM42Q9BTD8 480 aaKnown RBP14.49□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 ATG3Q9NT62 314 aa14.49□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 KDM3BQ7LBC6 1761 aa14.49□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 TJP1Q07157 1748 aa14.49□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 LOC102724428A0A0B4J2F2 783 aa14.48□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 SIK1P57059 783 aa14.48□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 TTC5Q8N0Z6 440 aa14.48□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 IL17REQ8NFR9 667 aa14.48□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 UBR3Q6ZT12 1888 aa14.47□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 TMPOP42166 694 aaKnown RBP14.47□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 RIPK4P57078 832 aa14.47□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 R3HDM1Q15032 1099 aaKnown RBP14.47□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 ANO8Q9HCE9 1232 aaPredicted RBP14.47□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 LRRC4BQ9NT99 713 aa14.47□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 PSDA5PKW4 1024 aaPredicted RBP14.46□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 ATP6V1AP38606 617 aa14.46□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 KCNQ4P56696 695 aa14.46□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 DCTN1Q14203 1278 aa14.46□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 NEUROD2Q15784 382 aa14.46□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 PNISRQ8TF01 805 aaKnown RBP14.46□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 CASZ1Q86V15 1759 aa14.46□□□□□ -0.09
CSPG4P2Y-201ENST00000306853 KCPQ6ZWJ8 1503 aa14.46□□□□□ -0.1
CSPG4P2Y-201ENST00000306853 BTBD11A6QL63 1104 aa14.45□□□□□ -0.1
CSPG4P2Y-201ENST00000306853 PTCD1O75127 700 aaKnown RBP14.45□□□□□ -0.1
CSPG4P2Y-201ENST00000306853 SLC39A6Q13433 755 aa14.45□□□□□ -0.1
CSPG4P2Y-201ENST00000306853 RRP7AQ9Y3A4 280 aaKnown RBP14.45□□□□□ -0.1
CSPG4P2Y-201ENST00000306853 LAMB4A4D0S4 1761 aa14.45□□□□□ -0.1
CSPG4P2Y-201ENST00000306853 SLC15A2Q16348 729 aa14.44□□□□□ -0.1
CSPG4P2Y-201ENST00000306853 FAM9BQ8IZU0 186 aa14.44□□□□□ -0.1
CSPG4P2Y-201ENST00000306853 AK7Q96M32 723 aa14.44□□□□□ -0.1
CSPG4P2Y-201ENST00000306853 CCER2I3L3R5 266 aa14.43□□□□□ -0.1
CSPG4P2Y-201ENST00000306853 APAF1O14727 1248 aa14.43□□□□□ -0.1
CSPG4P2Y-201ENST00000306853 TFCP2L1Q9NZI6 479 aa14.43□□□□□ -0.1
CSPG4P2Y-201ENST00000306853 MYH14Q7Z406 1995 aaKnown RBP14.42□□□□□ -0.1
CSPG4P2Y-201ENST00000306853 TAF7Q15545 349 aaPredicted RBP14.42□□□□□ -0.1
CSPG4P2Y-201ENST00000306853 ZNF827Q17R98 1081 aa14.42□□□□□ -0.1
CSPG4P2Y-201ENST00000306853 ZNF790Q6PG37 636 aa14.42□□□□□ -0.1
CSPG4P2Y-201ENST00000306853 ITPK1Q13572 414 aa14.41□□□□□ -0.1
CSPG4P2Y-201ENST00000306853 AKT1S1Q96B36 256 aa14.41□□□□□ -0.1
CSPG4P2Y-201ENST00000306853 FMNL2Q96PY5 1086 aa14.41□□□□□ -0.1
CSPG4P2Y-201ENST00000306853 THUMPD2Q9BTF0 503 aaKnown RBP14.41□□□□□ -0.1
CSPG4P2Y-201ENST00000306853 HEG1Q9ULI3 1381 aa14.4□□□□□ -0.1
CSPG4P2Y-201ENST00000306853 LINC00116Q8NCU8 138 aa14.4□□□□□ -0.1
CSPG4P2Y-201ENST00000306853 C4AP0C0L4 1744 aa14.4□□□□□ -0.1
CSPG4P2Y-201ENST00000306853 LRP5O75197 1615 aa14.4□□□□□ -0.1
CSPG4P2Y-201ENST00000306853 CALD1Q05682 793 aaKnown RBP14.39□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 VSIG10Q8N0Z9 540 aa14.39□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 CNTNAP4Q9C0A0 1308 aa14.39□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 GNPATO15228 680 aa14.38□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 MSH5O43196 834 aa14.38□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 FLAD1Q8NFF5 587 aa14.38□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 ZNF496Q96IT1 587 aaPredicted RBP14.38□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 SLC4A9Q96Q91 983 aa14.38□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 TSPYL4Q9UJ04 414 aa14.38□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 TRIM35Q9UPQ4 493 aa14.38□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 PHF14O94880 888 aa14.37□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 DNAJC10Q8IXB1 793 aa14.37□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 TEX13AQ9BXU3 409 aaPredicted RBP14.37□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 LAS1LQ9Y4W2 734 aaKnown RBP14.37□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 PNPLA7Q6ZV29 1317 aa14.37□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 KCNQ3O43525 872 aa14.36□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 STARD3NLO95772 234 aa14.36□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 SSFA2P28290 1259 aa14.36□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 CRKLP46109 303 aaKnown RBP14.36□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 RC3H1Q5TC82 1133 aaKnown RBP14.36□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 BABAM1Q9NWV8 329 aa14.36□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 MIS18AQ9NYP9 233 aa14.36□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 RTCBQ9Y3I0 505 aaKnown RBP14.36□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 SNRPA1P09661 255 aaKnown RBP14.35□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 MIER1Q8N108 512 aa14.35□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 CCDC27Q2M243 656 aa14.34□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 CCDC87Q9NVE4 849 aa14.34□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 COL24A1Q17RW2 1714 aa14.34□□□□□ -0.11
CSPG4P2Y-201ENST00000306853 SENP3-EIF4A1A0A087X0R7 540 aa14.33□□□□□ -0.12
CSPG4P2Y-201ENST00000306853 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.33□□□□□ -0.12
CSPG4P2Y-201ENST00000306853 ZBTB7AO95365 584 aa14.33□□□□□ -0.12
CSPG4P2Y-201ENST00000306853 CYP19A1P11511 503 aaPredicted RBP14.33□□□□□ -0.12
CSPG4P2Y-201ENST00000306853 ADRA2BP18089 450 aa14.33□□□□□ -0.12
CSPG4P2Y-201ENST00000306853 NCBP3Q53F19 620 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms