RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 KIAA0586Q9BVV6 1533 aa16.34■□□□□ 0.21
PRKCB-201ENST00000303531 METTL24Q5JXM2 366 aa16.33■□□□□ 0.21
PRKCB-201ENST00000303531 KCNH5Q8NCM2 988 aa16.33■□□□□ 0.21
PRKCB-201ENST00000303531 HMGXB3Q12766 1538 aa16.33■□□□□ 0.2
PRKCB-201ENST00000303531 EIF3JO75822 258 aaKnown RBP16.33■□□□□ 0.2
PRKCB-201ENST00000303531 TRIM27P14373 513 aa16.33■□□□□ 0.2
PRKCB-201ENST00000303531 SSFA2P28290 1259 aa16.33■□□□□ 0.2
PRKCB-201ENST00000303531 TAF7Q15545 349 aaPredicted RBP16.33■□□□□ 0.2
PRKCB-201ENST00000303531 EMILIN1Q9Y6C2 1016 aa16.33■□□□□ 0.2
PRKCB-201ENST00000303531 IGHMBP2P38935 993 aaKnown RBP16.33■□□□□ 0.2
PRKCB-201ENST00000303531 CCDC183Q5T5S1 534 aa16.33■□□□□ 0.2
PRKCB-201ENST00000303531 IQGAP2Q13576 1575 aa16.33■□□□□ 0.2
PRKCB-201ENST00000303531 LARP1Q6PKG0 1096 aaKnown RBP16.33■□□□□ 0.2
PRKCB-201ENST00000303531 NUTM2BA6NNL0 878 aaPredicted RBP16.32■□□□□ 0.2
PRKCB-201ENST00000303531 NUTM2EB1AL46 878 aaPredicted RBP16.32■□□□□ 0.2
PRKCB-201ENST00000303531 NUTM2AQ8IVF1 878 aaPredicted RBP16.32■□□□□ 0.2
PRKCB-201ENST00000303531 BMP2KQ9NSY1 1161 aaPredicted RBP16.32■□□□□ 0.2
PRKCB-201ENST00000303531 NCOA1Q15788 1441 aa16.32■□□□□ 0.2
PRKCB-201ENST00000303531 RBM5P52756 815 aaKnown RBP eCLIP16.32■□□□□ 0.2
PRKCB-201ENST00000303531 MYD88Q99836 296 aa16.32■□□□□ 0.2
PRKCB-201ENST00000303531 USHBP1Q8N6Y0 703 aa16.32■□□□□ 0.2
PRKCB-201ENST00000303531 ABCF2Q9UG63 623 aa16.32■□□□□ 0.2
PRKCB-201ENST00000303531 LRRFIP2Q9Y608 721 aaKnown RBP16.32■□□□□ 0.2
PRKCB-201ENST00000303531 CEP131Q9UPN4 1083 aa16.32■□□□□ 0.2
PRKCB-201ENST00000303531 EPB41L2O43491 1005 aaKnown RBP16.32■□□□□ 0.2
PRKCB-201ENST00000303531 SH2B1Q9NRF2 756 aaPredicted RBP16.32■□□□□ 0.2
PRKCB-201ENST00000303531 TNPO1Q92973 898 aaKnown RBP16.31■□□□□ 0.2
PRKCB-201ENST00000303531 SCAND2PQ9GZW5 306 aaPredicted RBP16.31■□□□□ 0.2
PRKCB-201ENST00000303531 AKAP2Q9Y2D5 859 aa16.31■□□□□ 0.2
PRKCB-201ENST00000303531 EIF5P55010 431 aaKnown RBP16.31■□□□□ 0.2
PRKCB-201ENST00000303531 FAM193AP78312 1265 aa16.3■□□□□ 0.2
PRKCB-201ENST00000303531 BICDL1Q6ZP65 573 aa16.3■□□□□ 0.2
PRKCB-201ENST00000303531 PLEKHH1Q9ULM0 1364 aa16.3■□□□□ 0.2
PRKCB-201ENST00000303531 ARHGAP29Q52LW3 1261 aa16.3■□□□□ 0.2
PRKCB-201ENST00000303531 CENPHQ9H3R5 247 aa16.3■□□□□ 0.2
PRKCB-201ENST00000303531 STARD3NLO95772 234 aa16.3■□□□□ 0.2
PRKCB-201ENST00000303531 NEFHP12036 1026 aa16.3■□□□□ 0.2
PRKCB-201ENST00000303531 CCDC8Q9H0W5 538 aaPredicted RBP16.3■□□□□ 0.2
PRKCB-201ENST00000303531 PTCD1O75127 700 aaKnown RBP16.3■□□□□ 0.2
PRKCB-201ENST00000303531 IFIT1P09914 478 aaKnown RBP16.3■□□□□ 0.2
PRKCB-201ENST00000303531 WWC2Q6AWC2 1192 aa16.3■□□□□ 0.2
PRKCB-201ENST00000303531 IQCEQ6IPM2 695 aa16.3■□□□□ 0.2
PRKCB-201ENST00000303531 ADGRF5Q8IZF2 1346 aa16.3■□□□□ 0.2
PRKCB-201ENST00000303531 SEPT11Q9NVA2 429 aaKnown RBP16.3■□□□□ 0.2
PRKCB-201ENST00000303531 CC2D2AQ9P2K1 1620 aa16.3■□□□□ 0.2
PRKCB-201ENST00000303531 KIAA1328Q86T90 577 aa16.29■□□□□ 0.2
PRKCB-201ENST00000303531 FAM135AQ9P2D6 1515 aa16.29■□□□□ 0.2
PRKCB-201ENST00000303531 SFPQP23246 707 aaKnown RBP eCLIP16.29■□□□□ 0.2
PRKCB-201ENST00000303531 ANO10Q9NW15 660 aa16.29■□□□□ 0.2
PRKCB-201ENST00000303531 ZSCAN29Q8IWY8 852 aaPredicted RBP16.29■□□□□ 0.2
PRKCB-201ENST00000303531 UBXN4Q92575 508 aa16.29■□□□□ 0.2
PRKCB-201ENST00000303531 DNAAF4Q8WXU2 420 aa16.28■□□□□ 0.2
PRKCB-201ENST00000303531 KIAA0754O94854 1291 aa16.28■□□□□ 0.2
PRKCB-201ENST00000303531 PDCL2Q8N4E4 241 aa16.28■□□□□ 0.2
PRKCB-201ENST00000303531 LIMCH1Q9UPQ0 1083 aa16.28■□□□□ 0.2
PRKCB-201ENST00000303531 USP5P45974 858 aa16.28■□□□□ 0.2
PRKCB-201ENST00000303531 GUCY1B3Q02153 619 aa16.28■□□□□ 0.2
PRKCB-201ENST00000303531 KIF14Q15058 1648 aa16.28■□□□□ 0.2
PRKCB-201ENST00000303531 C8orf76Q96K31 380 aa16.28■□□□□ 0.2
PRKCB-201ENST00000303531 RRP9O43818 475 aaKnown RBP16.27■□□□□ 0.2
PRKCB-201ENST00000303531 PTPN14Q15678 1187 aa16.27■□□□□ 0.2
PRKCB-201ENST00000303531 TBC1D9Q6ZT07 1266 aa16.27■□□□□ 0.2
PRKCB-201ENST00000303531 CCDC102AQ96A19 550 aa16.27■□□□□ 0.19
PRKCB-201ENST00000303531 MINDY4BA8MYZ0 360 aa16.27■□□□□ 0.19
PRKCB-201ENST00000303531 PTPRCP08575 1304 aa16.27■□□□□ 0.19
PRKCB-201ENST00000303531 LARP6Q9BRS8 491 aaKnown RBP16.26■□□□□ 0.19
PRKCB-201ENST00000303531 AMOTQ4VCS5 1084 aa16.26■□□□□ 0.19
PRKCB-201ENST00000303531 MPRIPQ6WCQ1 1025 aa16.26■□□□□ 0.19
PRKCB-201ENST00000303531 HMGB1P09429 215 aaKnown RBP16.26■□□□□ 0.19
PRKCB-201ENST00000303531 NAPBQ9H115 298 aa16.26■□□□□ 0.19
PRKCB-201ENST00000303531 ABCA10Q8WWZ4 1543 aa16.26■□□□□ 0.19
PRKCB-201ENST00000303531 PLB1Q6P1J6 1458 aa16.26■□□□□ 0.19
PRKCB-201ENST00000303531 POGZQ7Z3K3 1410 aa16.26■□□□□ 0.19
PRKCB-201ENST00000303531 ZNF76P36508 570 aa16.26■□□□□ 0.19
PRKCB-201ENST00000303531 FLIIQ13045 1269 aa16.25■□□□□ 0.19
PRKCB-201ENST00000303531 SEPT7Q16181 437 aaKnown RBP16.25■□□□□ 0.19
PRKCB-201ENST00000303531 KLHL10Q6JEL2 608 aa16.25■□□□□ 0.19
PRKCB-201ENST00000303531 CKAP2LQ8IYA6 745 aa16.25■□□□□ 0.19
PRKCB-201ENST00000303531 KIF2AO00139 706 aaPredicted RBP16.25■□□□□ 0.19
PRKCB-201ENST00000303531 IGHDP01880 384 aa16.25■□□□□ 0.19
PRKCB-201ENST00000303531 SCAF11Q99590 1463 aaKnown RBP16.25■□□□□ 0.19
PRKCB-201ENST00000303531 RPRD2Q5VT52 1461 aaKnown RBP16.25■□□□□ 0.19
PRKCB-201ENST00000303531 BMP2KLQ5H9B9 411 aa16.25■□□□□ 0.19
PRKCB-201ENST00000303531 CLIP2Q9UDT6 1046 aa16.25■□□□□ 0.19
PRKCB-201ENST00000303531 TAX1BP1Q86VP1 789 aa16.24■□□□□ 0.19
PRKCB-201ENST00000303531 TMOD3Q9NYL9 352 aa16.24■□□□□ 0.19
PRKCB-201ENST00000303531 USP25Q9UHP3 1055 aa16.24■□□□□ 0.19
PRKCB-201ENST00000303531 CCDC148Q8NFR7 591 aa16.24■□□□□ 0.19
PRKCB-201ENST00000303531 DISP3Q9P2K9 1392 aa16.24■□□□□ 0.19
PRKCB-201ENST00000303531 ZNF397Q8NF99 534 aaPredicted RBP16.24■□□□□ 0.19
PRKCB-201ENST00000303531 GDPD2Q9HCC8 539 aa16.24■□□□□ 0.19
PRKCB-201ENST00000303531 PPP1R1BQ9UD71 204 aaPredicted RBP16.24■□□□□ 0.19
PRKCB-201ENST00000303531 WASLO00401 505 aaPredicted RBP16.24■□□□□ 0.19
PRKCB-201ENST00000303531 ZSCAN12O43309 604 aa16.24■□□□□ 0.19
PRKCB-201ENST00000303531 ENOX2Q16206 610 aaKnown RBP16.24■□□□□ 0.19
PRKCB-201ENST00000303531 TAF4BQ92750 862 aa16.24■□□□□ 0.19
PRKCB-201ENST00000303531 DBF4Q9UBU7 674 aaPredicted RBP16.24■□□□□ 0.19
PRKCB-201ENST00000303531 CCDC196A0A1B0GTZ2 297 aa16.23■□□□□ 0.19
PRKCB-201ENST00000303531 IFIT5Q13325 482 aaKnown RBP16.23■□□□□ 0.19
PRKCB-201ENST00000303531 PHF23Q9BUL5 403 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms