RNA–Protein interactions for RNA: ENST00000303434.8

TRABD-201, Transcript of TraB domain containing, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRABD, Length 2,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-201ENST00000303434 ZNF830Q96NB3 372 aaPredicted RBP22.78■■□□□ 1.24
TRABD-201ENST00000303434 AMOTL2Q9Y2J4 779 aa22.78■■□□□ 1.24
TRABD-201ENST00000303434 SSH2Q76I76 1423 aa22.78■■□□□ 1.24
TRABD-201ENST00000303434 RGPD1P0DJD0 1748 aa22.78■■□□□ 1.24
TRABD-201ENST00000303434 SOX12O15370 315 aa22.77■■□□□ 1.24
TRABD-201ENST00000303434 ATP2B3Q16720 1220 aa22.77■■□□□ 1.24
TRABD-201ENST00000303434 ZSCAN23Q3MJ62 389 aa22.77■■□□□ 1.24
TRABD-201ENST00000303434 INTS3Q68E01 1043 aaKnown RBP22.77■■□□□ 1.24
TRABD-201ENST00000303434 BAG4O95429 457 aaKnown RBP22.75■■□□□ 1.23
TRABD-201ENST00000303434 KIAA0232Q92628 1395 aa22.75■■□□□ 1.23
TRABD-201ENST00000303434 TTC21AQ8NDW8 1320 aa22.74■■□□□ 1.23
TRABD-201ENST00000303434 KIAA2012Q0VF49 1180 aa22.74■■□□□ 1.23
TRABD-201ENST00000303434 SSFA2P28290 1259 aa22.74■■□□□ 1.23
TRABD-201ENST00000303434 TBX22Q9Y458 520 aa22.74■■□□□ 1.23
TRABD-201ENST00000303434 MAP3K19Q56UN5 1328 aa22.73■■□□□ 1.23
TRABD-201ENST00000303434 FER1L4A9Z1Z3 1794 aa22.73■■□□□ 1.23
TRABD-201ENST00000303434 DCTPP1Q9H773 170 aa22.73■■□□□ 1.23
TRABD-201ENST00000303434 VGLL3A8MV65 326 aa22.72■■□□□ 1.23
TRABD-201ENST00000303434 RGS12O14924 1447 aa22.72■■□□□ 1.23
TRABD-201ENST00000303434 CAVIN1Q6NZI2 390 aaKnown RBP22.71■■□□□ 1.23
TRABD-201ENST00000303434 CRB1P82279 1406 aa22.71■■□□□ 1.23
TRABD-201ENST00000303434 ARHGEF10O15013 1369 aa22.71■■□□□ 1.23
TRABD-201ENST00000303434 CDK11BP21127 795 aaKnown RBP22.71■■□□□ 1.23
TRABD-201ENST00000303434 TBC1D9Q6ZT07 1266 aa22.71■■□□□ 1.23
TRABD-201ENST00000303434 RGPD8O14715 1765 aaPredicted RBP22.71■■□□□ 1.23
TRABD-201ENST00000303434 SLIT1O75093 1534 aa22.7■■□□□ 1.23
TRABD-201ENST00000303434 PRIM1P49642 420 aaKnown RBP22.7■■□□□ 1.22
TRABD-201ENST00000303434 NGDNQ8NEJ9 315 aaKnown RBP22.7■■□□□ 1.22
TRABD-201ENST00000303434 PTPRCP08575 1304 aa22.7■■□□□ 1.22
TRABD-201ENST00000303434 FMN2Q9NZ56 1722 aa22.69■■□□□ 1.22
TRABD-201ENST00000303434 K7ELQ4 463 aaPredicted RBP22.69■■□□□ 1.22
TRABD-201ENST00000303434 MTHFSDQ2M296 383 aaKnown RBP22.69■■□□□ 1.22
TRABD-201ENST00000303434 ARHGAP23Q9P227 1491 aa22.69■■□□□ 1.22
TRABD-201ENST00000303434 FOXO3O43524 673 aa22.69■■□□□ 1.22
TRABD-201ENST00000303434 DNTTIP2Q5QJE6 756 aaKnown RBP22.69■■□□□ 1.22
TRABD-201ENST00000303434 PLPPR3Q6T4P5 718 aa22.69■■□□□ 1.22
TRABD-201ENST00000303434 ANKRD44Q8N8A2 993 aa22.69■■□□□ 1.22
TRABD-201ENST00000303434 MIS18AQ9NYP9 233 aa22.69■■□□□ 1.22
TRABD-201ENST00000303434 CGNQ9P2M7 1197 aaKnown RBP22.69■■□□□ 1.22
TRABD-201ENST00000303434 SBNO1A3KN83 1393 aa22.68■■□□□ 1.22
TRABD-201ENST00000303434 KIF3AQ9Y496 699 aa22.68■■□□□ 1.22
TRABD-201ENST00000303434 FLT4P35916 1363 aa22.68■■□□□ 1.22
TRABD-201ENST00000303434 PLEKHM2Q8IWE5 1019 aa22.68■■□□□ 1.22
TRABD-201ENST00000303434 RPAP2Q8IXW5 612 aaPredicted RBP22.68■■□□□ 1.22
TRABD-201ENST00000303434 KIF2CQ99661 725 aa22.67■■□□□ 1.22
TRABD-201ENST00000303434 SLC4A2P04920 1241 aa22.66■■□□□ 1.22
TRABD-201ENST00000303434 RTF1Q92541 710 aaKnown RBP22.66■■□□□ 1.22
TRABD-201ENST00000303434 AMPHP49418 695 aa22.66■■□□□ 1.22
TRABD-201ENST00000303434 ATP10DQ9P241 1426 aa22.66■■□□□ 1.22
TRABD-201ENST00000303434 DIP2AQ14689 1571 aa22.66■■□□□ 1.22
TRABD-201ENST00000303434 KDRP35968 1356 aa22.65■■□□□ 1.22
TRABD-201ENST00000303434 TSC1Q92574 1164 aa22.65■■□□□ 1.22
TRABD-201ENST00000303434 JARID2Q92833 1246 aaPredicted RBP22.65■■□□□ 1.22
TRABD-201ENST00000303434 EYA1Q99502 592 aa22.65■■□□□ 1.22
TRABD-201ENST00000303434 CDC45O75419 566 aa22.65■■□□□ 1.22
TRABD-201ENST00000303434 GSPT1P15170 499 aaKnown RBP22.65■■□□□ 1.22
TRABD-201ENST00000303434 CEP85Q6P2H3 762 aa22.65■■□□□ 1.22
TRABD-201ENST00000303434 THEMISQ8N1K5 641 aaPredicted RBP22.65■■□□□ 1.22
TRABD-201ENST00000303434 PDCL2Q8N4E4 241 aa22.65■■□□□ 1.22
TRABD-201ENST00000303434 LMBRD1Q9NUN5 540 aa22.65■■□□□ 1.22
TRABD-201ENST00000303434 RIMS1Q86UR5 1692 aaKnown RBP22.65■■□□□ 1.22
TRABD-201ENST00000303434 MSH6P52701 1360 aa22.64■■□□□ 1.21
TRABD-201ENST00000303434 PLCD3Q8N3E9 789 aa22.64■■□□□ 1.21
TRABD-201ENST00000303434 FOXD4L1Q9NU39 408 aa22.64■■□□□ 1.21
TRABD-201ENST00000303434 TSPYL4Q9UJ04 414 aa22.64■■□□□ 1.21
TRABD-201ENST00000303434 RTL1A6NKG5 1358 aa22.63■■□□□ 1.21
TRABD-201ENST00000303434 MCTP1Q6DN14 999 aa22.63■■□□□ 1.21
TRABD-201ENST00000303434 LRSAM1Q6UWE0 723 aa22.63■■□□□ 1.21
TRABD-201ENST00000303434 C16orf71Q8IYS4 520 aaPredicted RBP22.63■■□□□ 1.21
TRABD-201ENST00000303434 IGSF1Q8N6C5 1336 aa22.63■■□□□ 1.21
TRABD-201ENST00000303434 SLC20A2Q08357 652 aa22.63■■□□□ 1.21
TRABD-201ENST00000303434 PAXIP1Q6ZW49 1069 aaPredicted RBP22.63■■□□□ 1.21
TRABD-201ENST00000303434 MEIS3Q99687 375 aa22.63■■□□□ 1.21
TRABD-201ENST00000303434 ZNF771Q7L3S4 317 aaPredicted RBP22.62■■□□□ 1.21
TRABD-201ENST00000303434 ADAMTSL3P82987 1691 aa22.62■■□□□ 1.21
TRABD-201ENST00000303434 PIK3C2AO00443 1686 aa22.62■■□□□ 1.21
TRABD-201ENST00000303434 SPDYE4A6NLX3 237 aa22.62■■□□□ 1.21
TRABD-201ENST00000303434 FEZ1Q99689 392 aa22.62■■□□□ 1.21
TRABD-201ENST00000303434 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.62■■□□□ 1.21
TRABD-201ENST00000303434 PTMAP06454 111 aaKnown RBP22.61■■□□□ 1.21
TRABD-201ENST00000303434 NLRP6P59044 892 aa22.61■■□□□ 1.21
TRABD-201ENST00000303434 TTC22Q5TAA0 569 aa22.61■■□□□ 1.21
TRABD-201ENST00000303434 GAS2L2Q8NHY3 880 aa22.61■■□□□ 1.21
TRABD-201ENST00000303434 PIBF1Q8WXW3 757 aa22.61■■□□□ 1.21
TRABD-201ENST00000303434 CEP170BQ9Y4F5 1589 aaPredicted RBP22.61■■□□□ 1.21
TRABD-201ENST00000303434 NUCB2P80303 420 aa22.6■■□□□ 1.21
TRABD-201ENST00000303434 BCL2L12Q9HB09 334 aa22.6■■□□□ 1.21
TRABD-201ENST00000303434 G2E3Q7L622 706 aa22.6■■□□□ 1.21
TRABD-201ENST00000303434 CD2BP2O95400 341 aaKnown RBP22.59■■□□□ 1.21
TRABD-201ENST00000303434 ZBTB22O15209 634 aa22.59■■□□□ 1.21
TRABD-201ENST00000303434 IRX5P78411 483 aaPredicted RBP22.58■■□□□ 1.21
TRABD-201ENST00000303434 GABPB1Q06547 395 aaPredicted RBP22.58■■□□□ 1.2
TRABD-201ENST00000303434 NOLC1Q14978 699 aaKnown RBP eCLIP22.58■■□□□ 1.2
TRABD-201ENST00000303434 OTUD7AQ8TE49 926 aaPredicted RBP22.57■■□□□ 1.2
TRABD-201ENST00000303434 HTATSF1O43719 755 aaKnown RBP22.57■■□□□ 1.2
TRABD-201ENST00000303434 SLC4A10Q6U841 1118 aa22.57■■□□□ 1.2
TRABD-201ENST00000303434 RBM42Q9BTD8 480 aaKnown RBP22.57■■□□□ 1.2
TRABD-201ENST00000303434 XRN1Q8IZH2 1706 aaKnown RBP22.56■■□□□ 1.2
TRABD-201ENST00000303434 F6X3S4 739 aa22.56■■□□□ 1.2
TRABD-201ENST00000303434 SMARCA5O60264 1052 aaPredicted RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms