RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 ISY1Q9ULR0 285 aaKnown RBP16.58■□□□□ 0.24
CTTN-201ENST00000301843 MTHFSDQ2M296 383 aaKnown RBP16.58■□□□□ 0.24
CTTN-201ENST00000301843 TMX3Q96JJ7 454 aa16.58■□□□□ 0.24
CTTN-201ENST00000301843 R3HCC1Q9Y3T6 440 aaKnown RBP16.58■□□□□ 0.24
CTTN-201ENST00000301843 IL25Q9H293 177 aa16.57■□□□□ 0.24
CTTN-201ENST00000301843 ROBO2Q9HCK4 1378 aa16.57■□□□□ 0.24
CTTN-201ENST00000301843 FKBP5Q13451 457 aaPredicted RBP16.57■□□□□ 0.24
CTTN-201ENST00000301843 ZSCAN30Q86W11 494 aa16.57■□□□□ 0.24
CTTN-201ENST00000301843 ACEP12821 1306 aa16.56■□□□□ 0.24
CTTN-201ENST00000301843 REC8O95072 547 aa16.56■□□□□ 0.24
CTTN-201ENST00000301843 MAP3K19Q56UN5 1328 aa16.56■□□□□ 0.24
CTTN-201ENST00000301843 ADAMTS13Q76LX8 1427 aa16.56■□□□□ 0.24
CTTN-201ENST00000301843 PPP1R9BQ96SB3 815 aa16.55■□□□□ 0.24
CTTN-201ENST00000301843 NUTM1Q86Y26 1132 aa16.55■□□□□ 0.24
CTTN-201ENST00000301843 RTF1Q92541 710 aaKnown RBP16.55■□□□□ 0.24
CTTN-201ENST00000301843 SLC26A8Q96RN1 970 aa16.55■□□□□ 0.24
CTTN-201ENST00000301843 NRKQ7Z2Y5 1582 aa16.55■□□□□ 0.24
CTTN-201ENST00000301843 TTC21BQ7Z4L5 1316 aa16.54■□□□□ 0.24
CTTN-201ENST00000301843 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.54■□□□□ 0.24
CTTN-201ENST00000301843 PTMSP20962 102 aa16.53■□□□□ 0.24
CTTN-201ENST00000301843 GADD45BO75293 160 aaPredicted RBP16.53■□□□□ 0.24
CTTN-201ENST00000301843 ZNF445P59923 1031 aa16.53■□□□□ 0.24
CTTN-201ENST00000301843 DDX54Q8TDD1 881 aaKnown RBP16.53■□□□□ 0.24
CTTN-201ENST00000301843 LRRFIP2Q9Y608 721 aaKnown RBP16.53■□□□□ 0.24
CTTN-201ENST00000301843 TOPAZ1Q8N9V7 1692 aa16.52■□□□□ 0.24
CTTN-201ENST00000301843 CLEC17AQ6ZS10 378 aa16.52■□□□□ 0.24
CTTN-201ENST00000301843 HMMRO75330 724 aa16.52■□□□□ 0.23
CTTN-201ENST00000301843 USHBP1Q8N6Y0 703 aa16.51■□□□□ 0.23
CTTN-201ENST00000301843 ESYT1Q9BSJ8 1104 aa16.51■□□□□ 0.23
CTTN-201ENST00000301843 FAM13BQ9NYF5 915 aa16.51■□□□□ 0.23
CTTN-201ENST00000301843 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.51■□□□□ 0.23
CTTN-201ENST00000301843 GNAI2P04899 355 aa16.51■□□□□ 0.23
CTTN-201ENST00000301843 CPA1P15085 419 aa16.51■□□□□ 0.23
CTTN-201ENST00000301843 RIMS1Q86UR5 1692 aaKnown RBP16.51■□□□□ 0.23
CTTN-201ENST00000301843 MX1P20591 662 aa16.51■□□□□ 0.23
CTTN-201ENST00000301843 PLEKHG1Q9ULL1 1385 aa16.5■□□□□ 0.23
CTTN-201ENST00000301843 JARID2Q92833 1246 aaPredicted RBP16.5■□□□□ 0.23
CTTN-201ENST00000301843 LRRCC1Q9C099 1032 aa16.5■□□□□ 0.23
CTTN-201ENST00000301843 OVOS2A0A0J9YW53 1432 aa16.5■□□□□ 0.23
CTTN-201ENST00000301843 OVOS2Q6IE36 1432 aa16.5■□□□□ 0.23
CTTN-201ENST00000301843 PLEKHG3A1L390 1219 aa16.5■□□□□ 0.23
CTTN-201ENST00000301843 ZNF830Q96NB3 372 aaPredicted RBP16.5■□□□□ 0.23
CTTN-201ENST00000301843 ANXA1P04083 346 aa16.5■□□□□ 0.23
CTTN-201ENST00000301843 LTKP29376 864 aa16.5■□□□□ 0.23
CTTN-201ENST00000301843 STK31Q9BXU1 1019 aa16.5■□□□□ 0.23
CTTN-201ENST00000301843 CWC22Q9HCG8 908 aaKnown RBP16.5■□□□□ 0.23
CTTN-201ENST00000301843 PTPRCP08575 1304 aa16.49■□□□□ 0.23
CTTN-201ENST00000301843 AMPHP49418 695 aa16.49■□□□□ 0.23
CTTN-201ENST00000301843 FLIIQ13045 1269 aa16.49■□□□□ 0.23
CTTN-201ENST00000301843 EIF2S2P20042 333 aaKnown RBP16.49■□□□□ 0.23
CTTN-201ENST00000301843 PHAXQ9H814 394 aaKnown RBP16.48■□□□□ 0.23
CTTN-201ENST00000301843 USP6P35125 1406 aa16.48■□□□□ 0.23
CTTN-201ENST00000301843 RRP9O43818 475 aaKnown RBP16.48■□□□□ 0.23
CTTN-201ENST00000301843 CHMLP26374 656 aa16.48■□□□□ 0.23
CTTN-201ENST00000301843 EYA1Q99502 592 aa16.48■□□□□ 0.23
CTTN-201ENST00000301843 C14orf37Q86TY3 774 aa16.48■□□□□ 0.23
CTTN-201ENST00000301843 NALCNQ8IZF0 1738 aa16.47■□□□□ 0.23
CTTN-201ENST00000301843 PTMAP06454 111 aaKnown RBP16.47■□□□□ 0.23
CTTN-201ENST00000301843 PLCB2Q00722 1185 aa16.47■□□□□ 0.23
CTTN-201ENST00000301843 ZMYND15Q9H091 742 aa16.47■□□□□ 0.23
CTTN-201ENST00000301843 PEAK1Q9H792 1746 aa16.47■□□□□ 0.23
CTTN-201ENST00000301843 LRSAM1Q6UWE0 723 aa16.47■□□□□ 0.23
CTTN-201ENST00000301843 OFD1O75665 1012 aa16.46■□□□□ 0.23
CTTN-201ENST00000301843 C17orf53Q8N3J3 647 aaPredicted RBP16.46■□□□□ 0.23
CTTN-201ENST00000301843 CRB1P82279 1406 aa16.46■□□□□ 0.23
CTTN-201ENST00000301843 PTPRUQ92729 1446 aa16.46■□□□□ 0.23
CTTN-201ENST00000301843 USP31Q70CQ4 1352 aa16.45■□□□□ 0.22
CTTN-201ENST00000301843 RGPD1P0DJD0 1748 aa16.45■□□□□ 0.22
CTTN-201ENST00000301843 CCT4P50991 539 aaKnown RBP16.45■□□□□ 0.22
CTTN-201ENST00000301843 NGDNQ8NEJ9 315 aaKnown RBP16.45■□□□□ 0.22
CTTN-201ENST00000301843 SPG7Q9UQ90 795 aa16.45■□□□□ 0.22
CTTN-201ENST00000301843 KIF24Q5T7B8 1368 aa16.45■□□□□ 0.22
CTTN-201ENST00000301843 TSC1Q92574 1164 aa16.45■□□□□ 0.22
CTTN-201ENST00000301843 SURF6O75683 361 aaKnown RBP16.44■□□□□ 0.22
CTTN-201ENST00000301843 CEBPAP49715 358 aaPredicted RBP16.44■□□□□ 0.22
CTTN-201ENST00000301843 SSH2Q76I76 1423 aa16.44■□□□□ 0.22
CTTN-201ENST00000301843 RBM33Q96EV2 1170 aaKnown RBP16.44■□□□□ 0.22
CTTN-201ENST00000301843 BRD1O95696 1058 aa16.44■□□□□ 0.22
CTTN-201ENST00000301843 GLIPR1L2Q4G1C9 344 aa16.44■□□□□ 0.22
CTTN-201ENST00000301843 USP48Q86UV5 1035 aa16.44■□□□□ 0.22
CTTN-201ENST00000301843 IBTKQ9P2D0 1353 aaPredicted RBP16.44■□□□□ 0.22
CTTN-201ENST00000301843 CNPY2Q9Y2B0 182 aa16.43■□□□□ 0.22
CTTN-201ENST00000301843 KIAA0232Q92628 1395 aa16.43■□□□□ 0.22
CTTN-201ENST00000301843 HAP1P54257 671 aaPredicted RBP16.43■□□□□ 0.22
CTTN-201ENST00000301843 NOL7Q9UMY1 257 aaKnown RBP16.43■□□□□ 0.22
CTTN-201ENST00000301843 FAM177BA6PVY3 158 aa16.43■□□□□ 0.22
CTTN-201ENST00000301843 PDLIM2Q96JY6 352 aa16.43■□□□□ 0.22
CTTN-201ENST00000301843 CHMP3Q9Y3E7 222 aa16.43■□□□□ 0.22
CTTN-201ENST00000301843 UQCRHLA0A096LP55 91 aa16.42■□□□□ 0.22
CTTN-201ENST00000301843 UQCRHP07919 91 aa16.42■□□□□ 0.22
CTTN-201ENST00000301843 MCCP23508 829 aa16.42■□□□□ 0.22
CTTN-201ENST00000301843 CWC27Q6UX04 472 aaKnown RBP16.42■□□□□ 0.22
CTTN-201ENST00000301843 USP44Q9H0E7 712 aa16.42■□□□□ 0.22
CTTN-201ENST00000301843 TCHHQ07283 1943 aa16.42■□□□□ 0.22
CTTN-201ENST00000301843 TPM2P07951 284 aa16.42■□□□□ 0.22
CTTN-201ENST00000301843 UBTFL1P0CB47 393 aaPredicted RBP16.41■□□□□ 0.22
CTTN-201ENST00000301843 NLRP6P59044 892 aa16.41■□□□□ 0.22
CTTN-201ENST00000301843 ATP8B2P98198 1209 aa16.41■□□□□ 0.22
CTTN-201ENST00000301843 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.41■□□□□ 0.22
CTTN-201ENST00000301843 RASEFQ8IZ41 740 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms