RNA–Protein interactions for RNA: ENST00000301050.6

CACNB3-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACNB3, Length 2,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-201ENST00000301050 AEBP1Q8IUX7 1158 aa19.39■□□□□ 0.69
CACNB3-201ENST00000301050 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.39■□□□□ 0.69
CACNB3-201ENST00000301050 NOB1Q9ULX3 412 aaKnown RBP19.38■□□□□ 0.69
CACNB3-201ENST00000301050 FMN2Q9NZ56 1722 aa19.38■□□□□ 0.69
CACNB3-201ENST00000301050 LETM1O95202 739 aaPredicted RBP19.38■□□□□ 0.69
CACNB3-201ENST00000301050 PTMAP06454 111 aaKnown RBP19.38■□□□□ 0.69
CACNB3-201ENST00000301050 HSP90AB2PQ58FF8 381 aa19.38■□□□□ 0.69
CACNB3-201ENST00000301050 USP31Q70CQ4 1352 aa19.38■□□□□ 0.69
CACNB3-201ENST00000301050 RNF214Q8ND24 703 aa19.38■□□□□ 0.69
CACNB3-201ENST00000301050 PRIMPOLQ96LW4 560 aa19.38■□□□□ 0.69
CACNB3-201ENST00000301050 TTC21AQ8NDW8 1320 aa19.37■□□□□ 0.69
CACNB3-201ENST00000301050 CHD2O14647 1828 aaKnown RBP19.37■□□□□ 0.69
CACNB3-201ENST00000301050 DLG5Q8TDM6 1919 aa19.36■□□□□ 0.69
CACNB3-201ENST00000301050 GTF2F1P35269 517 aaKnown RBP eCLIP19.36■□□□□ 0.69
CACNB3-201ENST00000301050 PIK3C2AO00443 1686 aa19.36■□□□□ 0.69
CACNB3-201ENST00000301050 ANKARQ7Z5J8 1434 aa19.36■□□□□ 0.69
CACNB3-201ENST00000301050 ANKRD45Q5TZF3 282 aa19.36■□□□□ 0.69
CACNB3-201ENST00000301050 SULT6B1Q6IMI4 303 aa19.36■□□□□ 0.69
CACNB3-201ENST00000301050 NSFL1CQ9UNZ2 370 aaKnown RBP19.36■□□□□ 0.69
CACNB3-201ENST00000301050 RABEP1Q15276 862 aa19.35■□□□□ 0.69
CACNB3-201ENST00000301050 NUTM2GQ5VZR2 741 aa19.35■□□□□ 0.69
CACNB3-201ENST00000301050 FAM83GA6ND36 823 aa19.35■□□□□ 0.69
CACNB3-201ENST00000301050 HMGN5P82970 282 aaKnown RBP19.35■□□□□ 0.69
CACNB3-201ENST00000301050 MAP3K19Q56UN5 1328 aa19.34■□□□□ 0.69
CACNB3-201ENST00000301050 CHAMP1Q96JM3 812 aa19.34■□□□□ 0.69
CACNB3-201ENST00000301050 ZDHHC9Q9Y397 364 aa19.33■□□□□ 0.69
CACNB3-201ENST00000301050 FAM177BA6PVY3 158 aa19.33■□□□□ 0.68
CACNB3-201ENST00000301050 DCTN1Q14203 1278 aa19.33■□□□□ 0.68
CACNB3-201ENST00000301050 CWC22Q9HCG8 908 aaKnown RBP19.32■□□□□ 0.68
CACNB3-201ENST00000301050 CDC45O75419 566 aa19.31■□□□□ 0.68
CACNB3-201ENST00000301050 NLRP6P59044 892 aa19.31■□□□□ 0.68
CACNB3-201ENST00000301050 ZGPATQ8N5A5 531 aaKnown RBP19.31■□□□□ 0.68
CACNB3-201ENST00000301050 PIBF1Q8WXW3 757 aa19.31■□□□□ 0.68
CACNB3-201ENST00000301050 KIF3AQ9Y496 699 aa19.3■□□□□ 0.68
CACNB3-201ENST00000301050 SETD1BQ9UPS6 1966 aaKnown RBP19.3■□□□□ 0.68
CACNB3-201ENST00000301050 NOLC1Q14978 699 aaKnown RBP eCLIP19.3■□□□□ 0.68
CACNB3-201ENST00000301050 MBIPQ9NS73 344 aa19.3■□□□□ 0.68
CACNB3-201ENST00000301050 RGPD1P0DJD0 1748 aa19.3■□□□□ 0.68
CACNB3-201ENST00000301050 NPHP4O75161 1426 aaPredicted RBP19.3■□□□□ 0.68
CACNB3-201ENST00000301050 MPNDQ8N594 471 aa19.29■□□□□ 0.68
CACNB3-201ENST00000301050 ZNF830Q96NB3 372 aaPredicted RBP19.29■□□□□ 0.68
CACNB3-201ENST00000301050 DNAJC5Q9H3Z4 198 aa19.29■□□□□ 0.68
CACNB3-201ENST00000301050 SPDYE4A6NLX3 237 aa19.29■□□□□ 0.68
CACNB3-201ENST00000301050 GNAI1P63096 354 aa19.29■□□□□ 0.68
CACNB3-201ENST00000301050 IFT57Q9NWB7 429 aa19.29■□□□□ 0.68
CACNB3-201ENST00000301050 LMOD3Q0VAK6 560 aa19.28■□□□□ 0.68
CACNB3-201ENST00000301050 C14orf37Q86TY3 774 aa19.28■□□□□ 0.68
CACNB3-201ENST00000301050 TSPYL6Q8N831 410 aa19.28■□□□□ 0.68
CACNB3-201ENST00000301050 GCC1Q96CN9 775 aa19.28■□□□□ 0.68
CACNB3-201ENST00000301050 BCL2L12Q9HB09 334 aa19.28■□□□□ 0.68
CACNB3-201ENST00000301050 SBNO1A3KN83 1393 aa19.28■□□□□ 0.68
CACNB3-201ENST00000301050 MARF1Q9Y4F3 1742 aaKnown RBP19.28■□□□□ 0.68
CACNB3-201ENST00000301050 ELL2O00472 640 aaPredicted RBP19.28■□□□□ 0.68
CACNB3-201ENST00000301050 AMPHP49418 695 aa19.28■□□□□ 0.68
CACNB3-201ENST00000301050 TSPY26PQ9H489 355 aa19.28■□□□□ 0.68
CACNB3-201ENST00000301050 IPO8O15397 1037 aaKnown RBP19.28■□□□□ 0.68
CACNB3-201ENST00000301050 ZNF853P0CG23 659 aa19.28■□□□□ 0.68
CACNB3-201ENST00000301050 TMEM51Q9NW97 253 aa19.28■□□□□ 0.68
CACNB3-201ENST00000301050 PHF8Q9UPP1 1060 aa19.28■□□□□ 0.68
CACNB3-201ENST00000301050 FLT4P35916 1363 aa19.27■□□□□ 0.68
CACNB3-201ENST00000301050 ABTB2Q8N961 1025 aa19.27■□□□□ 0.68
CACNB3-201ENST00000301050 MBD3O95983 291 aa19.27■□□□□ 0.67
CACNB3-201ENST00000301050 C17orf53Q8N3J3 647 aaPredicted RBP19.27■□□□□ 0.67
CACNB3-201ENST00000301050 PDCL2Q8N4E4 241 aa19.26■□□□□ 0.67
CACNB3-201ENST00000301050 VAMP4O75379 141 aa19.25■□□□□ 0.67
CACNB3-201ENST00000301050 ALDH1L2Q3SY69 923 aa19.25■□□□□ 0.67
CACNB3-201ENST00000301050 CFAP44Q96MT7 982 aa19.25■□□□□ 0.67
CACNB3-201ENST00000301050 ADGRL3Q9HAR2 1447 aa19.25■□□□□ 0.67
CACNB3-201ENST00000301050 IGSF3O75054 1194 aa19.24■□□□□ 0.67
CACNB3-201ENST00000301050 GSPT1P15170 499 aaKnown RBP19.24■□□□□ 0.67
CACNB3-201ENST00000301050 MCM10Q7L590 875 aa19.24■□□□□ 0.67
CACNB3-201ENST00000301050 USP26Q9BXU7 913 aa19.24■□□□□ 0.67
CACNB3-201ENST00000301050 C1orf115Q9H7X2 142 aa19.24■□□□□ 0.67
CACNB3-201ENST00000301050 ARHGEF10O15013 1369 aa19.24■□□□□ 0.67
CACNB3-201ENST00000301050 FKBP5Q13451 457 aaPredicted RBP19.24■□□□□ 0.67
CACNB3-201ENST00000301050 ESCO1Q5FWF5 840 aa19.24■□□□□ 0.67
CACNB3-201ENST00000301050 FOXD4L5Q5VV16 416 aaPredicted RBP19.24■□□□□ 0.67
CACNB3-201ENST00000301050 FOXD4L4Q8WXT5 416 aaPredicted RBP19.24■□□□□ 0.67
CACNB3-201ENST00000301050 TTC12Q9H892 705 aaPredicted RBP19.23■□□□□ 0.67
CACNB3-201ENST00000301050 C8orf58Q8NAV2 365 aa19.23■□□□□ 0.67
CACNB3-201ENST00000301050 SPTLC3Q9NUV7 552 aa19.23■□□□□ 0.67
CACNB3-201ENST00000301050 NAP1L2Q9ULW6 460 aaPredicted RBP19.23■□□□□ 0.67
CACNB3-201ENST00000301050 U2AF2P26368 475 aaKnown RBP eCLIP19.22■□□□□ 0.67
CACNB3-201ENST00000301050 EYA1Q99502 592 aa19.22■□□□□ 0.67
CACNB3-201ENST00000301050 BCL11BQ9C0K0 894 aaPredicted RBP19.22■□□□□ 0.67
CACNB3-201ENST00000301050 ZBTB7BO15156 539 aaPredicted RBP19.21■□□□□ 0.67
CACNB3-201ENST00000301050 FOXO3O43524 673 aa19.21■□□□□ 0.67
CACNB3-201ENST00000301050 TWISTNBQ3B726 338 aaPredicted RBP19.21■□□□□ 0.67
CACNB3-201ENST00000301050 ST18O60284 1047 aa19.21■□□□□ 0.67
CACNB3-201ENST00000301050 TAF3Q5VWG9 929 aa19.21■□□□□ 0.67
CACNB3-201ENST00000301050 MRPL50Q8N5N7 158 aaKnown RBP19.21■□□□□ 0.67
CACNB3-201ENST00000301050 HOXC9P31274 260 aa19.2■□□□□ 0.66
CACNB3-201ENST00000301050 SIRT2Q8IXJ6 389 aa19.2■□□□□ 0.66
CACNB3-201ENST00000301050 USP54Q70EL1 1684 aa19.2■□□□□ 0.66
CACNB3-201ENST00000301050 LTV1Q96GA3 475 aaPredicted RBP19.2■□□□□ 0.66
CACNB3-201ENST00000301050 USP25Q9UHP3 1055 aa19.19■□□□□ 0.66
CACNB3-201ENST00000301050 MTHFSDQ2M296 383 aaKnown RBP19.19■□□□□ 0.66
CACNB3-201ENST00000301050 ANKRD7Q92527 254 aa19.19■□□□□ 0.66
CACNB3-201ENST00000301050 IGSF1Q8N6C5 1336 aa19.19■□□□□ 0.66
CACNB3-201ENST00000301050 PSME1Q06323 249 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms