RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 RRP9O43818 475 aaKnown RBP15.9■□□□□ 0.14
CASC4-201ENST00000299957 CDK11BP21127 795 aaKnown RBP15.9■□□□□ 0.14
CASC4-201ENST00000299957 CBX1P83916 185 aa15.9■□□□□ 0.14
CASC4-201ENST00000299957 HSP90AB4PQ58FF6 505 aa15.9■□□□□ 0.14
CASC4-201ENST00000299957 ZNF771Q7L3S4 317 aaPredicted RBP15.9■□□□□ 0.14
CASC4-201ENST00000299957 HOMER1Q86YM7 354 aa15.9■□□□□ 0.14
CASC4-201ENST00000299957 RAB11FIP4Q86YS3 637 aa15.9■□□□□ 0.14
CASC4-201ENST00000299957 EIF4G3O43432 1585 aaKnown RBP15.9■□□□□ 0.14
CASC4-201ENST00000299957 IL16Q14005 1332 aa15.9■□□□□ 0.14
CASC4-201ENST00000299957 INSRP06213 1382 aa15.89■□□□□ 0.14
CASC4-201ENST00000299957 RAB11FIP3O75154 756 aa15.89■□□□□ 0.13
CASC4-201ENST00000299957 RBM25P49756 843 aaKnown RBP15.89■□□□□ 0.13
CASC4-201ENST00000299957 HDAC5Q9UQL6 1122 aa15.89■□□□□ 0.13
CASC4-201ENST00000299957 TPD52L1Q16890 204 aaPredicted RBP15.89■□□□□ 0.13
CASC4-201ENST00000299957 TNMDQ9H2S6 317 aa15.89■□□□□ 0.13
CASC4-201ENST00000299957 PES1O00541 588 aaKnown RBP15.89■□□□□ 0.13
CASC4-201ENST00000299957 BLOC1S2Q6QNY1 142 aa15.89■□□□□ 0.13
CASC4-201ENST00000299957 USP48Q86UV5 1035 aa15.89■□□□□ 0.13
CASC4-201ENST00000299957 IGSF3O75054 1194 aa15.88■□□□□ 0.13
CASC4-201ENST00000299957 CCDC73Q6ZRK6 1079 aa15.88■□□□□ 0.13
CASC4-201ENST00000299957 FAM177A1Q8N128 213 aaPredicted RBP15.88■□□□□ 0.13
CASC4-201ENST00000299957 PNMA6EA0A0J9YXQ4 647 aa15.87■□□□□ 0.13
CASC4-201ENST00000299957 ADCY5O95622 1261 aa15.87■□□□□ 0.13
CASC4-201ENST00000299957 ESYT1Q9BSJ8 1104 aa15.87■□□□□ 0.13
CASC4-201ENST00000299957 AMOTL2Q9Y2J4 779 aa15.87■□□□□ 0.13
CASC4-201ENST00000299957 CEP170Q5SW79 1584 aa15.87■□□□□ 0.13
CASC4-201ENST00000299957 SPDYE4A6NLX3 237 aa15.86■□□□□ 0.13
CASC4-201ENST00000299957 SIRT2Q8IXJ6 389 aa15.86■□□□□ 0.13
CASC4-201ENST00000299957 ARHGAP45Q92619 1136 aa15.86■□□□□ 0.13
CASC4-201ENST00000299957 SPATA32Q96LK8 384 aa15.86■□□□□ 0.13
CASC4-201ENST00000299957 KRT85P78386 507 aa15.86■□□□□ 0.13
CASC4-201ENST00000299957 KIF1BPQ96EK5 621 aa15.86■□□□□ 0.13
CASC4-201ENST00000299957 TARBP1Q13395 1621 aaKnown RBP15.86■□□□□ 0.13
CASC4-201ENST00000299957 ME1P48163 572 aa15.86■□□□□ 0.13
CASC4-201ENST00000299957 MAPK8IP2Q13387 824 aaPredicted RBP15.86■□□□□ 0.13
CASC4-201ENST00000299957 ZHX1Q9UKY1 873 aaPredicted RBP15.86■□□□□ 0.13
CASC4-201ENST00000299957 CCDC192P0DO97 292 aa15.85■□□□□ 0.13
CASC4-201ENST00000299957 GJB2P29033 226 aa15.85■□□□□ 0.13
CASC4-201ENST00000299957 FKBP4Q02790 459 aaKnown RBP eCLIP15.85■□□□□ 0.13
CASC4-201ENST00000299957 CHMP4AQ9BY43 222 aa15.85■□□□□ 0.13
CASC4-201ENST00000299957 CHPF2Q9P2E5 772 aa15.85■□□□□ 0.13
CASC4-201ENST00000299957 MSH6P52701 1360 aa15.85■□□□□ 0.13
CASC4-201ENST00000299957 A0A0U1RQG5 324 aaPredicted RBP15.85■□□□□ 0.13
CASC4-201ENST00000299957 DNM1Q05193 864 aaKnown RBP15.85■□□□□ 0.13
CASC4-201ENST00000299957 ATP5J2-PTCD1G3V325 749 aa15.85■□□□□ 0.13
CASC4-201ENST00000299957 PTCD1O75127 700 aaKnown RBP15.85■□□□□ 0.13
CASC4-201ENST00000299957 GADD45BO75293 160 aaPredicted RBP15.85■□□□□ 0.13
CASC4-201ENST00000299957 C16orf45Q96MC5 204 aaPredicted RBP15.85■□□□□ 0.13
CASC4-201ENST00000299957 PALD1Q9ULE6 856 aa15.85■□□□□ 0.13
CASC4-201ENST00000299957 STX6O43752 255 aa15.85■□□□□ 0.13
CASC4-201ENST00000299957 CCT2P78371 535 aaKnown RBP15.85■□□□□ 0.13
CASC4-201ENST00000299957 RHPN1Q8TCX5 695 aa15.85■□□□□ 0.13
CASC4-201ENST00000299957 IL13P35225 146 aa15.84■□□□□ 0.13
CASC4-201ENST00000299957 UBE2Q2Q8WVN8 375 aa15.84■□□□□ 0.13
CASC4-201ENST00000299957 PLEKHF1Q96S99 279 aa15.84■□□□□ 0.13
CASC4-201ENST00000299957 SMC2O95347 1197 aa15.84■□□□□ 0.13
CASC4-201ENST00000299957 NUP62CLQ9H1M0 184 aa15.84■□□□□ 0.13
CASC4-201ENST00000299957 TMEM63CQ9P1W3 806 aa15.84■□□□□ 0.13
CASC4-201ENST00000299957 NPC1L1Q9UHC9 1359 aa15.84■□□□□ 0.13
CASC4-201ENST00000299957 ERVK-7P63135 1459 aa15.84■□□□□ 0.13
CASC4-201ENST00000299957 SLC39A6Q13433 755 aa15.84■□□□□ 0.13
CASC4-201ENST00000299957 DNAAF4Q8WXU2 420 aa15.84■□□□□ 0.13
CASC4-201ENST00000299957 LRRC59Q96AG4 307 aaKnown RBP15.84■□□□□ 0.13
CASC4-201ENST00000299957 MTMR7Q9Y216 660 aa15.84■□□□□ 0.13
CASC4-201ENST00000299957 NDUFB9Q9Y6M9 179 aa15.84■□□□□ 0.13
CASC4-201ENST00000299957 PBRM1Q86U86 1689 aa15.83■□□□□ 0.13
CASC4-201ENST00000299957 ASXL2Q76L83 1435 aa15.83■□□□□ 0.13
CASC4-201ENST00000299957 ISM2Q6H9L7 571 aa15.83■□□□□ 0.13
CASC4-201ENST00000299957 TRMT1Q9NXH9 659 aaKnown RBP15.83■□□□□ 0.13
CASC4-201ENST00000299957 LIMCH1Q9UPQ0 1083 aa15.83■□□□□ 0.13
CASC4-201ENST00000299957 PSMA5P28066 241 aa15.83■□□□□ 0.12
CASC4-201ENST00000299957 CWF19L2Q2TBE0 894 aaKnown RBP15.83■□□□□ 0.12
CASC4-201ENST00000299957 TTLL5Q6EMB2 1281 aa15.83■□□□□ 0.12
CASC4-201ENST00000299957 LRSAM1Q6UWE0 723 aa15.83■□□□□ 0.12
CASC4-201ENST00000299957 NSD2O96028 1365 aa15.83■□□□□ 0.12
CASC4-201ENST00000299957 TTC21BQ7Z4L5 1316 aa15.83■□□□□ 0.12
CASC4-201ENST00000299957 PLEKHO1Q53GL0 409 aaPredicted RBP15.83■□□□□ 0.12
CASC4-201ENST00000299957 KLHDC4Q8TBB5 520 aa15.83■□□□□ 0.12
CASC4-201ENST00000299957 KIF3AQ9Y496 699 aa15.83■□□□□ 0.12
CASC4-201ENST00000299957 EYA1Q99502 592 aa15.82■□□□□ 0.12
CASC4-201ENST00000299957 KINO60870 393 aaKnown RBP15.82■□□□□ 0.12
CASC4-201ENST00000299957 NFXL1Q6ZNB6 911 aa15.82■□□□□ 0.12
CASC4-201ENST00000299957 RASSF8Q8NHQ8 419 aa15.82■□□□□ 0.12
CASC4-201ENST00000299957 MAP3K2Q9Y2U5 619 aa15.82■□□□□ 0.12
CASC4-201ENST00000299957 GLRX3O76003 335 aaKnown RBP15.81■□□□□ 0.12
CASC4-201ENST00000299957 PPIP5K1Q6PFW1 1433 aa15.81■□□□□ 0.12
CASC4-201ENST00000299957 SNRKQ9NRH2 765 aa15.81■□□□□ 0.12
CASC4-201ENST00000299957 PDILTQ8N807 584 aa15.81■□□□□ 0.12
CASC4-201ENST00000299957 ATP10AO60312 1499 aa15.81■□□□□ 0.12
CASC4-201ENST00000299957 CHMLP26374 656 aa15.81■□□□□ 0.12
CASC4-201ENST00000299957 TPM4P67936 248 aa15.81■□□□□ 0.12
CASC4-201ENST00000299957 SYNE3Q6ZMZ3 975 aa15.81■□□□□ 0.12
CASC4-201ENST00000299957 AK2P54819 239 aa15.8■□□□□ 0.12
CASC4-201ENST00000299957 RRP12Q5JTH9 1297 aaKnown RBP15.8■□□□□ 0.12
CASC4-201ENST00000299957 CCDC82Q8N4S0 544 aa15.8■□□□□ 0.12
CASC4-201ENST00000299957 LMBRD1Q9NUN5 540 aa15.8■□□□□ 0.12
CASC4-201ENST00000299957 PTPRCP08575 1304 aa15.8■□□□□ 0.12
CASC4-201ENST00000299957 MYD88Q99836 296 aa15.8■□□□□ 0.12
CASC4-201ENST00000299957 ERBB4Q15303 1308 aa15.8■□□□□ 0.12
CASC4-201ENST00000299957 BIN1O00499 593 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms