RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 PCDH11YQ9BZA8 1340 aa14.03□□□□□ -0.16
VWA3A-201ENST00000299840 TRIM37O94972 964 aa14.03□□□□□ -0.16
VWA3A-201ENST00000299840 BTAF1O14981 1849 aa14.03□□□□□ -0.16
VWA3A-201ENST00000299840 RREB1Q92766 1687 aa14.03□□□□□ -0.16
VWA3A-201ENST00000299840 SPG7Q9UQ90 795 aa14.03□□□□□ -0.16
VWA3A-201ENST00000299840 ITGB4P16144 1822 aa14.03□□□□□ -0.16
VWA3A-201ENST00000299840 BAG6P46379 1132 aa14.02□□□□□ -0.16
VWA3A-201ENST00000299840 NKX1-1Q15270 411 aaPredicted RBP14.01□□□□□ -0.17
VWA3A-201ENST00000299840 DDX54Q8TDD1 881 aaKnown RBP14.01□□□□□ -0.17
VWA3A-201ENST00000299840 VIRMAQ69YN4 1812 aaKnown RBP14.01□□□□□ -0.17
VWA3A-201ENST00000299840 SULT6B1Q6IMI4 303 aa14.01□□□□□ -0.17
VWA3A-201ENST00000299840 TOGARAM1Q9Y4F4 1720 aa14.01□□□□□ -0.17
VWA3A-201ENST00000299840 CYP27B1O15528 508 aa14□□□□□ -0.17
VWA3A-201ENST00000299840 AMOTQ4VCS5 1084 aa14□□□□□ -0.17
VWA3A-201ENST00000299840 AEBP1Q8IUX7 1158 aa14□□□□□ -0.17
VWA3A-201ENST00000299840 PLEKHO1Q53GL0 409 aaPredicted RBP14□□□□□ -0.17
VWA3A-201ENST00000299840 PLSCR1O15162 318 aa13.99□□□□□ -0.17
VWA3A-201ENST00000299840 APBA3O96018 575 aa13.99□□□□□ -0.17
VWA3A-201ENST00000299840 DEFB132Q7Z7B7 95 aa13.99□□□□□ -0.17
VWA3A-201ENST00000299840 CAMKK2Q96RR4 588 aa13.99□□□□□ -0.17
VWA3A-201ENST00000299840 NUDCQ9Y266 331 aa13.99□□□□□ -0.17
VWA3A-201ENST00000299840 MYBBP1AQ9BQG0 1328 aaKnown RBP13.98□□□□□ -0.17
VWA3A-201ENST00000299840 NUP188Q5SRE5 1749 aa13.98□□□□□ -0.17
VWA3A-201ENST00000299840 SCN11AQ9UI33 1791 aa13.98□□□□□ -0.17
VWA3A-201ENST00000299840 IFNL2Q8IZJ0 200 aa13.98□□□□□ -0.17
VWA3A-201ENST00000299840 PRKRIP1Q9H875 184 aaPredicted RBP13.98□□□□□ -0.17
VWA3A-201ENST00000299840 LY75O60449 1722 aa13.97□□□□□ -0.17
VWA3A-201ENST00000299840 PHKG2P15735 406 aa13.97□□□□□ -0.17
VWA3A-201ENST00000299840 KCNQ2O43526 872 aa13.97□□□□□ -0.17
VWA3A-201ENST00000299840 EN1Q05925 392 aaPredicted RBP13.97□□□□□ -0.17
VWA3A-201ENST00000299840 PTF1AQ7RTS3 328 aa13.97□□□□□ -0.17
VWA3A-201ENST00000299840 ZBTB47Q9UFB7 747 aaPredicted RBP13.97□□□□□ -0.17
VWA3A-201ENST00000299840 ADAMTS7Q9UKP4 1686 aa13.96□□□□□ -0.17
VWA3A-201ENST00000299840 ACSBG1Q96GR2 724 aa13.96□□□□□ -0.18
VWA3A-201ENST00000299840 U2SURPO15042 1029 aaKnown RBP13.95□□□□□ -0.18
VWA3A-201ENST00000299840 HSP90AB1P08238 724 aaKnown RBP13.95□□□□□ -0.18
VWA3A-201ENST00000299840 HMOX1P09601 288 aa13.95□□□□□ -0.18
VWA3A-201ENST00000299840 IPO9Q96P70 1041 aaKnown RBP13.95□□□□□ -0.18
VWA3A-201ENST00000299840 TPRNQ4KMQ1 711 aa13.95□□□□□ -0.18
VWA3A-201ENST00000299840 PRIM1P49642 420 aaKnown RBP13.94□□□□□ -0.18
VWA3A-201ENST00000299840 GSE1Q14687 1217 aa13.94□□□□□ -0.18
VWA3A-201ENST00000299840 EZH2Q15910 746 aaKnown RBP13.94□□□□□ -0.18
VWA3A-201ENST00000299840 FCHSD2O94868 740 aa13.94□□□□□ -0.18
VWA3A-201ENST00000299840 NCLP19338 710 aaKnown RBP13.94□□□□□ -0.18
VWA3A-201ENST00000299840 ZNF530Q6P9A1 599 aaPredicted RBP13.94□□□□□ -0.18
VWA3A-201ENST00000299840 DCAF5Q96JK2 942 aa13.93□□□□□ -0.18
VWA3A-201ENST00000299840 AKAP4Q5JQC9 854 aa13.92□□□□□ -0.18
VWA3A-201ENST00000299840 CNPY4Q8N129 248 aa13.92□□□□□ -0.18
VWA3A-201ENST00000299840 RNF216Q9NWF9 866 aaPredicted RBP13.92□□□□□ -0.18
VWA3A-201ENST00000299840 ERVV-2B6SEH9 535 aa13.92□□□□□ -0.18
VWA3A-201ENST00000299840 U2AF1L5P0DN76 240 aaPredicted RBP13.92□□□□□ -0.18
VWA3A-201ENST00000299840 U2AF1Q01081 240 aaKnown RBP eCLIP13.92□□□□□ -0.18
VWA3A-201ENST00000299840 KDM6AO15550 1401 aaPredicted RBP13.92□□□□□ -0.18
VWA3A-201ENST00000299840 C1orf141Q5JVX7 400 aa13.91□□□□□ -0.18
VWA3A-201ENST00000299840 MTHFSDQ2M296 383 aaKnown RBP13.91□□□□□ -0.18
VWA3A-201ENST00000299840 PROM2Q8N271 834 aa13.91□□□□□ -0.18
VWA3A-201ENST00000299840 PLCD3Q8N3E9 789 aa13.91□□□□□ -0.18
VWA3A-201ENST00000299840 DLG5Q8TDM6 1919 aa13.91□□□□□ -0.18
VWA3A-201ENST00000299840 TAF1LQ8IZX4 1826 aa13.9□□□□□ -0.18
VWA3A-201ENST00000299840 ZNF831Q5JPB2 1677 aa13.9□□□□□ -0.18
VWA3A-201ENST00000299840 PAPPAQ13219 1627 aa13.9□□□□□ -0.18
VWA3A-201ENST00000299840 PRKAR2BP31323 418 aa13.9□□□□□ -0.18
VWA3A-201ENST00000299840 GAS2L2Q8NHY3 880 aa13.9□□□□□ -0.18
VWA3A-201ENST00000299840 MRC1P22897 1456 aa13.89□□□□□ -0.19
VWA3A-201ENST00000299840 SIPA1L3O60292 1781 aaPredicted RBP13.89□□□□□ -0.19
VWA3A-201ENST00000299840 ANP32AP39687 249 aaKnown RBP13.89□□□□□ -0.19
VWA3A-201ENST00000299840 TXNRD1Q16881 649 aa13.89□□□□□ -0.19
VWA3A-201ENST00000299840 PDCL3Q9H2J4 239 aa13.89□□□□□ -0.19
VWA3A-201ENST00000299840 SYTL4Q96C24 671 aaPredicted RBP13.89□□□□□ -0.19
VWA3A-201ENST00000299840 PNNQ9H307 717 aaKnown RBP13.89□□□□□ -0.19
VWA3A-201ENST00000299840 QSER1Q2KHR3 1735 aa13.88□□□□□ -0.19
VWA3A-201ENST00000299840 PIGBQ92521 554 aa13.88□□□□□ -0.19
VWA3A-201ENST00000299840 ZNF830Q96NB3 372 aaPredicted RBP13.88□□□□□ -0.19
VWA3A-201ENST00000299840 SLC27A3Q5K4L6 730 aa13.88□□□□□ -0.19
VWA3A-201ENST00000299840 SMARCC1Q92922 1105 aaPredicted RBP13.88□□□□□ -0.19
VWA3A-201ENST00000299840 PHACTR3Q96KR7 559 aa13.88□□□□□ -0.19
VWA3A-201ENST00000299840 MPRIPQ6WCQ1 1025 aa13.87□□□□□ -0.19
VWA3A-201ENST00000299840 PLEKHF1Q96S99 279 aa13.87□□□□□ -0.19
VWA3A-201ENST00000299840 TMOD3Q9NYL9 352 aa13.87□□□□□ -0.19
VWA3A-201ENST00000299840 MAP3K5Q99683 1374 aa13.86□□□□□ -0.19
VWA3A-201ENST00000299840 RNMTO43148 476 aaKnown RBP13.86□□□□□ -0.19
VWA3A-201ENST00000299840 ANP32CO43423 234 aa13.86□□□□□ -0.19
VWA3A-201ENST00000299840 C5P01031 1676 aa13.86□□□□□ -0.19
VWA3A-201ENST00000299840 HMGB2P26583 209 aaKnown RBP13.86□□□□□ -0.19
VWA3A-201ENST00000299840 NBPF14Q5TI25 921 aa13.86□□□□□ -0.19
VWA3A-201ENST00000299840 CICQ96RK0 1608 aaPredicted RBP13.85□□□□□ -0.19
VWA3A-201ENST00000299840 GNAT3A8MTJ3 354 aa13.85□□□□□ -0.19
VWA3A-201ENST00000299840 HTATSF1O43719 755 aaKnown RBP13.85□□□□□ -0.19
VWA3A-201ENST00000299840 CABP4P57796 275 aa13.85□□□□□ -0.19
VWA3A-201ENST00000299840 PALLDQ8WX93 1383 aa13.85□□□□□ -0.19
VWA3A-201ENST00000299840 UBR2Q8IWV8 1755 aa13.84□□□□□ -0.19
VWA3A-201ENST00000299840 SLC52A2Q9HAB3 445 aa13.84□□□□□ -0.19
VWA3A-201ENST00000299840 LGR6Q9HBX8 967 aa13.84□□□□□ -0.19
VWA3A-201ENST00000299840 KCNG1Q9UIX4 513 aa13.84□□□□□ -0.19
VWA3A-201ENST00000299840 TUBGCP6Q96RT7 1819 aa13.83□□□□□ -0.2
VWA3A-201ENST00000299840 CEMIPQ8WUJ3 1361 aa13.83□□□□□ -0.2
VWA3A-201ENST00000299840 ATG3Q9NT62 314 aa13.83□□□□□ -0.2
VWA3A-201ENST00000299840 LRRC4BQ9NT99 713 aa13.83□□□□□ -0.2
VWA3A-201ENST00000299840 CASZ1Q86V15 1759 aa13.83□□□□□ -0.2
VWA3A-201ENST00000299840 IL17REQ8NFR9 667 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms