RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 PRPF40AO75400 957 aaKnown RBP16.42■□□□□ 0.22
CTDP1-202ENST00000299543 CCT4P50991 539 aaKnown RBP16.42■□□□□ 0.22
CTDP1-202ENST00000299543 ABTB2Q8N961 1025 aa16.42■□□□□ 0.22
CTDP1-202ENST00000299543 PNMA6EA0A0J9YXQ4 647 aa16.42■□□□□ 0.22
CTDP1-202ENST00000299543 MAPK8IP2Q13387 824 aaPredicted RBP16.41■□□□□ 0.22
CTDP1-202ENST00000299543 LRRFIP2Q9Y608 721 aaKnown RBP16.41■□□□□ 0.22
CTDP1-202ENST00000299543 NCOA3Q9Y6Q9 1424 aa16.41■□□□□ 0.22
CTDP1-202ENST00000299543 UQCRHLA0A096LP55 91 aa16.41■□□□□ 0.22
CTDP1-202ENST00000299543 UQCRHP07919 91 aa16.41■□□□□ 0.22
CTDP1-202ENST00000299543 SIRT1Q96EB6 747 aa16.41■□□□□ 0.22
CTDP1-202ENST00000299543 ATP10DQ9P241 1426 aa16.4■□□□□ 0.22
CTDP1-202ENST00000299543 NUCB2P80303 420 aa16.4■□□□□ 0.22
CTDP1-202ENST00000299543 CCDC30Q5VVM6 783 aa16.4■□□□□ 0.22
CTDP1-202ENST00000299543 LRRCC1Q9C099 1032 aa16.4■□□□□ 0.22
CTDP1-202ENST00000299543 AK9Q5TCS8 1911 aa16.4■□□□□ 0.22
CTDP1-202ENST00000299543 DLG5Q8TDM6 1919 aa16.4■□□□□ 0.22
CTDP1-202ENST00000299543 VGLL3A8MV65 326 aa16.4■□□□□ 0.22
CTDP1-202ENST00000299543 GTF2E1P29083 439 aaPredicted RBP16.4■□□□□ 0.22
CTDP1-202ENST00000299543 GNAT3A8MTJ3 354 aa16.39■□□□□ 0.21
CTDP1-202ENST00000299543 NUTM1Q86Y26 1132 aa16.39■□□□□ 0.21
CTDP1-202ENST00000299543 UPF3BQ9BZI7 483 aaKnown RBP16.39■□□□□ 0.21
CTDP1-202ENST00000299543 USP6P35125 1406 aa16.39■□□□□ 0.21
CTDP1-202ENST00000299543 LMOD2Q6P5Q4 547 aa16.38■□□□□ 0.21
CTDP1-202ENST00000299543 KIAA0232Q92628 1395 aa16.38■□□□□ 0.21
CTDP1-202ENST00000299543 ANXA1P04083 346 aa16.38■□□□□ 0.21
CTDP1-202ENST00000299543 NASPP49321 788 aaPredicted RBP16.38■□□□□ 0.21
CTDP1-202ENST00000299543 RBM27Q9P2N5 1060 aaKnown RBP16.38■□□□□ 0.21
CTDP1-202ENST00000299543 RGS12O14924 1447 aa16.38■□□□□ 0.21
CTDP1-202ENST00000299543 SPATA31D1Q6ZQQ2 1576 aa16.38■□□□□ 0.21
CTDP1-202ENST00000299543 OFD1O75665 1012 aa16.38■□□□□ 0.21
CTDP1-202ENST00000299543 PHAXQ9H814 394 aaKnown RBP16.38■□□□□ 0.21
CTDP1-202ENST00000299543 FAM177BA6PVY3 158 aa16.37■□□□□ 0.21
CTDP1-202ENST00000299543 IGSF3O75054 1194 aa16.37■□□□□ 0.21
CTDP1-202ENST00000299543 MX1P20591 662 aa16.37■□□□□ 0.21
CTDP1-202ENST00000299543 HDGFL1Q5TGJ6 251 aa16.37■□□□□ 0.21
CTDP1-202ENST00000299543 KIF24Q5T7B8 1368 aa16.37■□□□□ 0.21
CTDP1-202ENST00000299543 GNAI3P08754 354 aa16.37■□□□□ 0.21
CTDP1-202ENST00000299543 SURF6O75683 361 aaKnown RBP16.37■□□□□ 0.21
CTDP1-202ENST00000299543 UBTFL1P0CB47 393 aaPredicted RBP16.37■□□□□ 0.21
CTDP1-202ENST00000299543 PTMSP20962 102 aa16.37■□□□□ 0.21
CTDP1-202ENST00000299543 IL17REQ8NFR9 667 aa16.36■□□□□ 0.21
CTDP1-202ENST00000299543 CRB1P82279 1406 aa16.36■□□□□ 0.21
CTDP1-202ENST00000299543 FLT4P35916 1363 aa16.36■□□□□ 0.21
CTDP1-202ENST00000299543 RIMBP3CA6NJZ7 1639 aa16.36■□□□□ 0.21
CTDP1-202ENST00000299543 RIMBP3BA6NNM3 1639 aa16.36■□□□□ 0.21
CTDP1-202ENST00000299543 RIMBP3Q9UFD9 1639 aa16.36■□□□□ 0.21
CTDP1-202ENST00000299543 DNTTIP2Q5QJE6 756 aaKnown RBP16.35■□□□□ 0.21
CTDP1-202ENST00000299543 LARP6Q9BRS8 491 aaKnown RBP16.35■□□□□ 0.21
CTDP1-202ENST00000299543 PALD1Q9ULE6 856 aa16.35■□□□□ 0.21
CTDP1-202ENST00000299543 ZBTB22O15209 634 aa16.35■□□□□ 0.21
CTDP1-202ENST00000299543 KLHL40Q2TBA0 621 aa16.35■□□□□ 0.21
CTDP1-202ENST00000299543 ZSCAN30Q86W11 494 aa16.35■□□□□ 0.21
CTDP1-202ENST00000299543 UNC5CLQ8IV45 518 aa16.35■□□□□ 0.21
CTDP1-202ENST00000299543 DTNBO60941 627 aa16.34■□□□□ 0.21
CTDP1-202ENST00000299543 MCCP23508 829 aa16.34■□□□□ 0.21
CTDP1-202ENST00000299543 OS9Q13438 667 aaPredicted RBP16.34■□□□□ 0.21
CTDP1-202ENST00000299543 MPNDQ8N594 471 aa16.34■□□□□ 0.21
CTDP1-202ENST00000299543 ADAMTS13Q76LX8 1427 aa16.34■□□□□ 0.21
CTDP1-202ENST00000299543 TMX3Q96JJ7 454 aa16.34■□□□□ 0.21
CTDP1-202ENST00000299543 OVOS2A0A0J9YW53 1432 aa16.34■□□□□ 0.21
CTDP1-202ENST00000299543 OVOS2Q6IE36 1432 aa16.34■□□□□ 0.21
CTDP1-202ENST00000299543 AGLP35573 1532 aa16.34■□□□□ 0.21
CTDP1-202ENST00000299543 HOXC9P31274 260 aa16.34■□□□□ 0.21
CTDP1-202ENST00000299543 TAF7Q15545 349 aaPredicted RBP16.34■□□□□ 0.21
CTDP1-202ENST00000299543 PLCD3Q8N3E9 789 aa16.34■□□□□ 0.21
CTDP1-202ENST00000299543 KNDC1Q76NI1 1749 aa16.33■□□□□ 0.21
CTDP1-202ENST00000299543 ESYT1Q9BSJ8 1104 aa16.33■□□□□ 0.2
CTDP1-202ENST00000299543 DIP2BQ9P265 1576 aa16.33■□□□□ 0.2
CTDP1-202ENST00000299543 KCNA6P17658 529 aa16.33■□□□□ 0.2
CTDP1-202ENST00000299543 ATP8B2P98198 1209 aa16.33■□□□□ 0.2
CTDP1-202ENST00000299543 SBNO1A3KN83 1393 aa16.32■□□□□ 0.2
CTDP1-202ENST00000299543 CWC22Q9HCG8 908 aaKnown RBP16.32■□□□□ 0.2
CTDP1-202ENST00000299543 NRXN3Q9Y4C0 1643 aa16.32■□□□□ 0.2
CTDP1-202ENST00000299543 TTC21AQ8NDW8 1320 aa16.32■□□□□ 0.2
CTDP1-202ENST00000299543 CBX1P83916 185 aa16.32■□□□□ 0.2
CTDP1-202ENST00000299543 LMBRD1Q9NUN5 540 aa16.32■□□□□ 0.2
CTDP1-202ENST00000299543 SRGAP3O43295 1099 aa16.31■□□□□ 0.2
CTDP1-202ENST00000299543 ZSCAN23Q3MJ62 389 aa16.31■□□□□ 0.2
CTDP1-202ENST00000299543 PPP1R42Q7Z4L9 355 aa16.31■□□□□ 0.2
CTDP1-202ENST00000299543 RNF214Q8ND24 703 aa16.31■□□□□ 0.2
CTDP1-202ENST00000299543 USP44Q9H0E7 712 aa16.31■□□□□ 0.2
CTDP1-202ENST00000299543 ISY1Q9ULR0 285 aaKnown RBP16.31■□□□□ 0.2
CTDP1-202ENST00000299543 NAP1L2Q9ULW6 460 aaPredicted RBP16.31■□□□□ 0.2
CTDP1-202ENST00000299543 SMAP1Q8IYB5 467 aaPredicted RBP16.31■□□□□ 0.2
CTDP1-202ENST00000299543 LGR6Q9HBX8 967 aa16.31■□□□□ 0.2
CTDP1-202ENST00000299543 GDPD2Q9HCC8 539 aa16.31■□□□□ 0.2
CTDP1-202ENST00000299543 TECPR2O15040 1411 aa16.31■□□□□ 0.2
CTDP1-202ENST00000299543 PTPRUQ92729 1446 aa16.31■□□□□ 0.2
CTDP1-202ENST00000299543 CHMLP26374 656 aa16.3■□□□□ 0.2
CTDP1-202ENST00000299543 IGSF1Q8N6C5 1336 aa16.3■□□□□ 0.2
CTDP1-202ENST00000299543 ARHGEF10O15013 1369 aa16.3■□□□□ 0.2
CTDP1-202ENST00000299543 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.3■□□□□ 0.2
CTDP1-202ENST00000299543 ZDHHC9Q9Y397 364 aa16.3■□□□□ 0.2
CTDP1-202ENST00000299543 KCNQ3O43525 872 aa16.3■□□□□ 0.2
CTDP1-202ENST00000299543 SYCE3A1L190 88 aa16.29■□□□□ 0.2
CTDP1-202ENST00000299543 PDIA4P13667 645 aaKnown RBP16.29■□□□□ 0.2
CTDP1-202ENST00000299543 PRIM1P49642 420 aaKnown RBP16.29■□□□□ 0.2
CTDP1-202ENST00000299543 SRCIN1Q9C0H9 1055 aa16.29■□□□□ 0.2
CTDP1-202ENST00000299543 PI4KAP2A4QPH2 592 aa16.29■□□□□ 0.2
CTDP1-202ENST00000299543 PI4KAP1Q8N8J0 262 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms