RNA–Protein interactions for RNA: ENST00000299238.6

HPS6-201, Transcript of HPS6, biogenesis of lysosomal organelles complex 2 subunit 3, humanhuman

APPRIS P1 BASIC

Gene HPS6, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6-201ENST00000299238 CD2BP2O95400 341 aaKnown RBP24.81■■□□□ 1.56
HPS6-201ENST00000299238 ANKRD44Q8N8A2 993 aa24.81■■□□□ 1.56
HPS6-201ENST00000299238 RBM42Q9BTD8 480 aaKnown RBP24.81■■□□□ 1.56
HPS6-201ENST00000299238 DDX11L8A8MPP1 907 aa24.8■■□□□ 1.56
HPS6-201ENST00000299238 PLEKHM2Q8IWE5 1019 aa24.8■■□□□ 1.56
HPS6-201ENST00000299238 GSPT1P15170 499 aaKnown RBP24.8■■□□□ 1.56
HPS6-201ENST00000299238 PHF8Q9UPP1 1060 aa24.8■■□□□ 1.56
HPS6-201ENST00000299238 UQCRHLA0A096LP55 91 aa24.79■■□□□ 1.56
HPS6-201ENST00000299238 UQCRHP07919 91 aa24.79■■□□□ 1.56
HPS6-201ENST00000299238 APBB1O00213 710 aa24.79■■□□□ 1.56
HPS6-201ENST00000299238 MSNP26038 577 aaKnown RBP24.79■■□□□ 1.56
HPS6-201ENST00000299238 C16orf71Q8IYS4 520 aaPredicted RBP24.78■■□□□ 1.56
HPS6-201ENST00000299238 RTL1A6NKG5 1358 aa24.78■■□□□ 1.56
HPS6-201ENST00000299238 CDC45O75419 566 aa24.77■■□□□ 1.56
HPS6-201ENST00000299238 SLC4A2P04920 1241 aa24.77■■□□□ 1.56
HPS6-201ENST00000299238 CEP85Q6P2H3 762 aa24.77■■□□□ 1.56
HPS6-201ENST00000299238 C14orf37Q86TY3 774 aa24.77■■□□□ 1.56
HPS6-201ENST00000299238 FAM208AQ9UK61 1670 aaKnown RBP24.77■■□□□ 1.56
HPS6-201ENST00000299238 HSP90AB1P08238 724 aaKnown RBP24.77■■□□□ 1.56
HPS6-201ENST00000299238 RPAP2Q8IXW5 612 aaPredicted RBP24.77■■□□□ 1.56
HPS6-201ENST00000299238 RBM33Q96EV2 1170 aaKnown RBP24.77■■□□□ 1.56
HPS6-201ENST00000299238 ADAMTSL3P82987 1691 aa24.76■■□□□ 1.55
HPS6-201ENST00000299238 HTATSF1O43719 755 aaKnown RBP24.76■■□□□ 1.55
HPS6-201ENST00000299238 ADGRL3Q9HAR2 1447 aa24.75■■□□□ 1.55
HPS6-201ENST00000299238 TERF1P54274 439 aa24.75■■□□□ 1.55
HPS6-201ENST00000299238 CCDC173Q0VFZ6 552 aa24.75■■□□□ 1.55
HPS6-201ENST00000299238 LTV1Q96GA3 475 aaPredicted RBP24.75■■□□□ 1.55
HPS6-201ENST00000299238 OTUD7AQ8TE49 926 aaPredicted RBP24.75■■□□□ 1.55
HPS6-201ENST00000299238 NFAT5O94916 1531 aa24.74■■□□□ 1.55
HPS6-201ENST00000299238 GNAT3A8MTJ3 354 aa24.74■■□□□ 1.55
HPS6-201ENST00000299238 XPCQ01831 940 aaPredicted RBP24.74■■□□□ 1.55
HPS6-201ENST00000299238 PDIA4P13667 645 aaKnown RBP24.74■■□□□ 1.55
HPS6-201ENST00000299238 PPP1R9BQ96SB3 815 aa24.74■■□□□ 1.55
HPS6-201ENST00000299238 MEIS3Q99687 375 aa24.74■■□□□ 1.55
HPS6-201ENST00000299238 MAP3K5Q99683 1374 aa24.74■■□□□ 1.55
HPS6-201ENST00000299238 DMTNQ08495 405 aa24.73■■□□□ 1.55
HPS6-201ENST00000299238 TTC22Q5TAA0 569 aa24.73■■□□□ 1.55
HPS6-201ENST00000299238 NASPP49321 788 aaPredicted RBP24.73■■□□□ 1.55
HPS6-201ENST00000299238 G2E3Q7L622 706 aa24.72■■□□□ 1.55
HPS6-201ENST00000299238 ZSCAN20P17040 1043 aaPredicted RBP24.72■■□□□ 1.55
HPS6-201ENST00000299238 SMARCA5O60264 1052 aaPredicted RBP24.71■■□□□ 1.55
HPS6-201ENST00000299238 SETD1BQ9UPS6 1966 aaKnown RBP24.71■■□□□ 1.55
HPS6-201ENST00000299238 TNPO1Q92973 898 aaKnown RBP24.7■■□□□ 1.54
HPS6-201ENST00000299238 USHBP1Q8N6Y0 703 aa24.69■■□□□ 1.54
HPS6-201ENST00000299238 CIZ1Q9ULV3 898 aaPredicted RBP24.69■■□□□ 1.54
HPS6-201ENST00000299238 NAP1L2Q9ULW6 460 aaPredicted RBP24.68■■□□□ 1.54
HPS6-201ENST00000299238 F6X3S4 739 aa24.67■■□□□ 1.54
HPS6-201ENST00000299238 ESCO1Q5FWF5 840 aa24.67■■□□□ 1.54
HPS6-201ENST00000299238 IL17REQ8NFR9 667 aa24.67■■□□□ 1.54
HPS6-201ENST00000299238 CACNA1FO60840 1977 aa24.67■■□□□ 1.54
HPS6-201ENST00000299238 UTP14CQ5TAP6 766 aaKnown RBP24.67■■□□□ 1.54
HPS6-201ENST00000299238 STK31Q9BXU1 1019 aa24.67■■□□□ 1.54
HPS6-201ENST00000299238 NPHP4O75161 1426 aaPredicted RBP24.67■■□□□ 1.54
HPS6-201ENST00000299238 PHRF1Q9P1Y6 1649 aaKnown RBP24.66■■□□□ 1.54
HPS6-201ENST00000299238 SLC4A10Q6U841 1118 aa24.66■■□□□ 1.54
HPS6-201ENST00000299238 IP6K1Q92551 441 aa24.66■■□□□ 1.54
HPS6-201ENST00000299238 K7ELQ4 463 aaPredicted RBP24.66■■□□□ 1.54
HPS6-201ENST00000299238 CCT4P50991 539 aaKnown RBP24.65■■□□□ 1.54
HPS6-201ENST00000299238 RGPD2P0DJD1 1756 aa24.65■■□□□ 1.54
HPS6-201ENST00000299238 PSME1Q06323 249 aa24.65■■□□□ 1.54
HPS6-201ENST00000299238 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.65■■□□□ 1.54
HPS6-201ENST00000299238 N4BP2Q86UW6 1770 aaPredicted RBP24.64■■□□□ 1.54
HPS6-201ENST00000299238 RAB3GAP1Q15042 981 aa24.64■■□□□ 1.53
HPS6-201ENST00000299238 PPP4R3BQ5MIZ7 849 aa24.64■■□□□ 1.53
HPS6-201ENST00000299238 CCDC30Q5VVM6 783 aa24.63■■□□□ 1.53
HPS6-201ENST00000299238 SDSP20132 328 aa24.63■■□□□ 1.53
HPS6-201ENST00000299238 TAF7Q15545 349 aaPredicted RBP24.62■■□□□ 1.53
HPS6-201ENST00000299238 JARID2Q92833 1246 aaPredicted RBP24.62■■□□□ 1.53
HPS6-201ENST00000299238 FLIIQ13045 1269 aa24.62■■□□□ 1.53
HPS6-201ENST00000299238 USP26Q9BXU7 913 aa24.62■■□□□ 1.53
HPS6-201ENST00000299238 BABAM1Q9NWV8 329 aa24.62■■□□□ 1.53
HPS6-201ENST00000299238 DYNC1I1O14576 645 aa24.61■■□□□ 1.53
HPS6-201ENST00000299238 SOS1Q07889 1333 aaPredicted RBP24.61■■□□□ 1.53
HPS6-201ENST00000299238 MED1Q15648 1581 aaPredicted RBP24.61■■□□□ 1.53
HPS6-201ENST00000299238 ANP32BQ92688 251 aaKnown RBP24.61■■□□□ 1.53
HPS6-201ENST00000299238 NECTIN2Q92692 538 aa24.61■■□□□ 1.53
HPS6-201ENST00000299238 CCDC94Q9BW85 323 aaPredicted RBP24.61■■□□□ 1.53
HPS6-201ENST00000299238 HMMRO75330 724 aa24.6■■□□□ 1.53
HPS6-201ENST00000299238 NBPF6Q5VWK0 638 aa24.6■■□□□ 1.53
HPS6-201ENST00000299238 MTERF4Q7Z6M4 381 aaKnown RBP24.6■■□□□ 1.53
HPS6-201ENST00000299238 KCNH5Q8NCM2 988 aa24.6■■□□□ 1.53
HPS6-201ENST00000299238 NBPF4Q96M43 638 aa24.6■■□□□ 1.53
HPS6-201ENST00000299238 ZBTB7CA1YPR0 619 aa24.6■■□□□ 1.53
HPS6-201ENST00000299238 FKBP5Q13451 457 aaPredicted RBP24.59■■□□□ 1.53
HPS6-201ENST00000299238 CEMIPQ8WUJ3 1361 aa24.59■■□□□ 1.53
HPS6-201ENST00000299238 RABEP1Q15276 862 aa24.58■■□□□ 1.53
HPS6-201ENST00000299238 LMO7Q8WWI1 1683 aa24.58■■□□□ 1.53
HPS6-201ENST00000299238 SSFA2P28290 1259 aa24.58■■□□□ 1.52
HPS6-201ENST00000299238 KDM3BQ7LBC6 1761 aa24.58■■□□□ 1.52
HPS6-201ENST00000299238 SLIT3O75094 1523 aa24.57■■□□□ 1.52
HPS6-201ENST00000299238 ZNF500O60304 480 aaPredicted RBP24.57■■□□□ 1.52
HPS6-201ENST00000299238 NOL7Q9UMY1 257 aaKnown RBP24.57■■□□□ 1.52
HPS6-201ENST00000299238 ORAI2Q96SN7 254 aa24.57■■□□□ 1.52
HPS6-201ENST00000299238 OSBPL3Q9H4L5 887 aa24.56■■□□□ 1.52
HPS6-201ENST00000299238 GNAI2P04899 355 aa24.56■■□□□ 1.52
HPS6-201ENST00000299238 TSHZ3Q63HK5 1081 aa24.56■■□□□ 1.52
HPS6-201ENST00000299238 AEBP2Q6ZN18 517 aaPredicted RBP24.56■■□□□ 1.52
HPS6-201ENST00000299238 PXDNLA1KZ92 1463 aa24.56■■□□□ 1.52
HPS6-201ENST00000299238 CBX1P83916 185 aa24.55■■□□□ 1.52
HPS6-201ENST00000299238 GBP4Q96PP9 640 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms