RNA–Protein interactions for RNA: ENST00000298852.7

PSMC3-201, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-201ENST00000298852 IFT57Q9NWB7 429 aa21.47■■□□□ 1.03
PSMC3-201ENST00000298852 KDM3BQ7LBC6 1761 aa21.47■■□□□ 1.03
PSMC3-201ENST00000298852 ZNF853P0CG23 659 aa21.46■■□□□ 1.03
PSMC3-201ENST00000298852 GNAI1P63096 354 aa21.46■■□□□ 1.03
PSMC3-201ENST00000298852 PAPPAQ13219 1627 aa21.46■■□□□ 1.03
PSMC3-201ENST00000298852 TMOD3Q9NYL9 352 aa21.45■■□□□ 1.02
PSMC3-201ENST00000298852 CHL1O00533 1208 aa21.45■■□□□ 1.02
PSMC3-201ENST00000298852 NFATC2IPQ8NCF5 419 aa21.45■■□□□ 1.02
PSMC3-201ENST00000298852 YTHDC1Q96MU7 727 aaKnown RBP21.44■■□□□ 1.02
PSMC3-201ENST00000298852 E9PSI1 815 aa21.43■■□□□ 1.02
PSMC3-201ENST00000298852 PRIM1P49642 420 aaKnown RBP21.43■■□□□ 1.02
PSMC3-201ENST00000298852 UBR2Q8IWV8 1755 aa21.43■■□□□ 1.02
PSMC3-201ENST00000298852 BTAF1O14981 1849 aa21.42■■□□□ 1.02
PSMC3-201ENST00000298852 FAM182BQ5T319 152 aa21.42■■□□□ 1.02
PSMC3-201ENST00000298852 MYH16Q9H6N6 1097 aa21.42■■□□□ 1.02
PSMC3-201ENST00000298852 PIGBQ92521 554 aa21.41■■□□□ 1.02
PSMC3-201ENST00000298852 BTBD11A6QL63 1104 aa21.4■■□□□ 1.02
PSMC3-201ENST00000298852 SLFN5Q08AF3 891 aa21.4■■□□□ 1.02
PSMC3-201ENST00000298852 TRMT2AQ8IZ69 625 aaKnown RBP21.4■■□□□ 1.02
PSMC3-201ENST00000298852 BCL11BQ9C0K0 894 aaPredicted RBP21.4■■□□□ 1.02
PSMC3-201ENST00000298852 ACSBG1Q96GR2 724 aa21.39■■□□□ 1.02
PSMC3-201ENST00000298852 SYTL4Q96C24 671 aaPredicted RBP21.39■■□□□ 1.01
PSMC3-201ENST00000298852 TSPYL4Q9UJ04 414 aa21.39■■□□□ 1.01
PSMC3-201ENST00000298852 KCNQ2O43526 872 aa21.38■■□□□ 1.01
PSMC3-201ENST00000298852 ZNF790Q6PG37 636 aa21.38■■□□□ 1.01
PSMC3-201ENST00000298852 SPINK5Q9NQ38 1064 aaPredicted RBP21.38■■□□□ 1.01
PSMC3-201ENST00000298852 MBIPQ9NS73 344 aa21.38■■□□□ 1.01
PSMC3-201ENST00000298852 ZNF831Q5JPB2 1677 aa21.38■■□□□ 1.01
PSMC3-201ENST00000298852 FANCIQ9NVI1 1328 aa21.37■■□□□ 1.01
PSMC3-201ENST00000298852 TNS1Q9HBL0 1735 aaKnown RBP21.36■■□□□ 1.01
PSMC3-201ENST00000298852 SMARCC1Q92922 1105 aaPredicted RBP21.36■■□□□ 1.01
PSMC3-201ENST00000298852 CDCA7LQ96GN5 454 aa21.36■■□□□ 1.01
PSMC3-201ENST00000298852 DUSP27Q5VZP5 1158 aa21.35■■□□□ 1.01
PSMC3-201ENST00000298852 LAS1LQ9Y4W2 734 aaKnown RBP21.35■■□□□ 1.01
PSMC3-201ENST00000298852 CICQ96RK0 1608 aaPredicted RBP21.35■■□□□ 1.01
PSMC3-201ENST00000298852 RGPD3A6NKT7 1758 aaPredicted RBP21.35■■□□□ 1.01
PSMC3-201ENST00000298852 RGPD4Q7Z3J3 1758 aa21.35■■□□□ 1.01
PSMC3-201ENST00000298852 KCPQ6ZWJ8 1503 aa21.35■■□□□ 1.01
PSMC3-201ENST00000298852 TTC5Q8N0Z6 440 aa21.34■■□□□ 1.01
PSMC3-201ENST00000298852 ATG3Q9NT62 314 aa21.34■■□□□ 1.01
PSMC3-201ENST00000298852 LY75O60449 1722 aa21.34■■□□□ 1.01
PSMC3-201ENST00000298852 HEG1Q9ULI3 1381 aa21.34■■□□□ 1.01
PSMC3-201ENST00000298852 MIS18AQ9NYP9 233 aa21.34■■□□□ 1.01
PSMC3-201ENST00000298852 SOS1Q07889 1333 aaPredicted RBP21.34■■□□□ 1.01
PSMC3-201ENST00000298852 TRIM37O94972 964 aa21.33■■□□□ 1
PSMC3-201ENST00000298852 ASAP1Q9ULH1 1129 aa21.33■■□□□ 1
PSMC3-201ENST00000298852 EIF4A1P60842 406 aaKnown RBP21.32■■□□□ 1
PSMC3-201ENST00000298852 SLC39A6Q13433 755 aa21.32■■□□□ 1
PSMC3-201ENST00000298852 TSR2Q969E8 191 aaKnown RBP21.32■■□□□ 1
PSMC3-201ENST00000298852 PTF1AQ7RTS3 328 aa21.31■■□□□ 1
PSMC3-201ENST00000298852 VSIG10Q8N0Z9 540 aa21.31■■□□□ 1
PSMC3-201ENST00000298852 FMNL2Q96PY5 1086 aa21.31■■□□□ 1
PSMC3-201ENST00000298852 PALLDQ8WX93 1383 aa21.3■■□□□ 1
PSMC3-201ENST00000298852 HOXB7P09629 217 aa21.3■■□□□ 1
PSMC3-201ENST00000298852 KCNQ3O43525 872 aa21.29■■□□□ 1
PSMC3-201ENST00000298852 CT47B1P0C2W7 299 aaPredicted RBP21.29■■□□□ 1
PSMC3-201ENST00000298852 CCDC125Q86Z20 511 aa21.29■■□□□ 1
PSMC3-201ENST00000298852 ZNF496Q96IT1 587 aaPredicted RBP21.29■■□□□ 1
PSMC3-201ENST00000298852 LAMB4A4D0S4 1761 aa21.29■■□□□ 1
PSMC3-201ENST00000298852 PLSCR1O15162 318 aa21.29■■□□□ 1
PSMC3-201ENST00000298852 CHMP4AQ9BY43 222 aa21.28■■□□□ 1
PSMC3-201ENST00000298852 CACNA1FO60840 1977 aa21.27■■□□□ 1
PSMC3-201ENST00000298852 GIGYF1O75420 1035 aaPredicted RBP21.27■■□□□ 1
PSMC3-201ENST00000298852 HMGB2P26583 209 aaKnown RBP21.27■■□□□ 1
PSMC3-201ENST00000298852 C5P01031 1676 aa21.26■□□□□ 0.99
PSMC3-201ENST00000298852 SNRPA1P09661 255 aaKnown RBP21.26■□□□□ 0.99
PSMC3-201ENST00000298852 EXOSC9Q06265 439 aaKnown RBP21.26■□□□□ 0.99
PSMC3-201ENST00000298852 ZNF428Q96B54 188 aa21.26■□□□□ 0.99
PSMC3-201ENST00000298852 TEX13AQ9BXU3 409 aaPredicted RBP21.26■□□□□ 0.99
PSMC3-201ENST00000298852 TJP1Q07157 1748 aa21.26■□□□□ 0.99
PSMC3-201ENST00000298852 LOC102724428A0A0B4J2F2 783 aa21.25■□□□□ 0.99
PSMC3-201ENST00000298852 PTCD1O75127 700 aaKnown RBP21.25■□□□□ 0.99
PSMC3-201ENST00000298852 SIK1P57059 783 aa21.25■□□□□ 0.99
PSMC3-201ENST00000298852 C8orf58Q8NAV2 365 aa21.24■□□□□ 0.99
PSMC3-201ENST00000298852 TAF1LQ8IZX4 1826 aa21.24■□□□□ 0.99
PSMC3-201ENST00000298852 COL5A3P25940 1745 aaPredicted RBP21.24■□□□□ 0.99
PSMC3-201ENST00000298852 TWISTNBQ3B726 338 aaPredicted RBP21.24■□□□□ 0.99
PSMC3-201ENST00000298852 APBA3O96018 575 aa21.23■□□□□ 0.99
PSMC3-201ENST00000298852 SLC27A3Q5K4L6 730 aa21.23■□□□□ 0.99
PSMC3-201ENST00000298852 RBM42Q9BTD8 480 aaKnown RBP21.23■□□□□ 0.99
PSMC3-201ENST00000298852 SF3B2Q13435 895 aaKnown RBP21.22■□□□□ 0.99
PSMC3-201ENST00000298852 TSPYL6Q8N831 410 aa21.22■□□□□ 0.99
PSMC3-201ENST00000298852 SLC4A9Q96Q91 983 aa21.22■□□□□ 0.99
PSMC3-201ENST00000298852 VAMP4O75379 141 aa21.21■□□□□ 0.99
PSMC3-201ENST00000298852 KRT24Q2M2I5 525 aa21.21■□□□□ 0.99
PSMC3-201ENST00000298852 ATP6V1AP38606 617 aa21.19■□□□□ 0.98
PSMC3-201ENST00000298852 BAG6P46379 1132 aa21.19■□□□□ 0.98
PSMC3-201ENST00000298852 RREB1Q92766 1687 aa21.19■□□□□ 0.98
PSMC3-201ENST00000298852 ERBB4Q15303 1308 aa21.19■□□□□ 0.98
PSMC3-201ENST00000298852 CCNL1Q9UK58 526 aaPredicted RBP21.19■□□□□ 0.98
PSMC3-201ENST00000298852 STARD3NLO95772 234 aa21.18■□□□□ 0.98
PSMC3-201ENST00000298852 ELL2O00472 640 aaPredicted RBP21.17■□□□□ 0.98
PSMC3-201ENST00000298852 TXNRD1Q16881 649 aa21.17■□□□□ 0.98
PSMC3-201ENST00000298852 HDGFL1Q5TGJ6 251 aa21.17■□□□□ 0.98
PSMC3-201ENST00000298852 DNAJC10Q8IXB1 793 aa21.17■□□□□ 0.98
PSMC3-201ENST00000298852 MYH14Q7Z406 1995 aaKnown RBP21.16■□□□□ 0.98
PSMC3-201ENST00000298852 ITPK1Q13572 414 aa21.16■□□□□ 0.98
PSMC3-201ENST00000298852 ALDH1L2Q3SY69 923 aa21.16■□□□□ 0.98
PSMC3-201ENST00000298852 CCDC30Q5VVM6 783 aa21.16■□□□□ 0.98
PSMC3-201ENST00000298852 ILDR2Q71H61 639 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms