RNA–Protein interactions for RNA: ENST00000297439.3

DEFB1-201, Transcript of defensin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEFB1, Length 478 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB1-201ENST00000297439 ANTXR1Q9H6X2 564 aa8.29□□□□□ -1.08
DEFB1-201ENST00000297439 LAS1LQ9Y4W2 734 aaKnown RBP8.29□□□□□ -1.08
DEFB1-201ENST00000297439 LMTK3Q96Q04 1460 aa8.29□□□□□ -1.08
DEFB1-201ENST00000297439 VASPP50552 380 aaPredicted RBP8.28□□□□□ -1.08
DEFB1-201ENST00000297439 RRS1Q15050 365 aaKnown RBP8.28□□□□□ -1.08
DEFB1-201ENST00000297439 ZNF467Q7Z7K2 595 aaPredicted RBP8.28□□□□□ -1.08
DEFB1-201ENST00000297439 TSPYL6Q8N831 410 aa8.28□□□□□ -1.08
DEFB1-201ENST00000297439 SNX21Q969T3 373 aa8.28□□□□□ -1.08
DEFB1-201ENST00000297439 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.28□□□□□ -1.08
DEFB1-201ENST00000297439 AMOTL2Q9Y2J4 779 aa8.28□□□□□ -1.08
DEFB1-201ENST00000297439 MARF1Q9Y4F3 1742 aaKnown RBP8.28□□□□□ -1.08
DEFB1-201ENST00000297439 ATP10DQ9P241 1426 aa8.28□□□□□ -1.08
DEFB1-201ENST00000297439 NCKAP5LQ9HCH0 1330 aa8.28□□□□□ -1.08
DEFB1-201ENST00000297439 N4BP2Q86UW6 1770 aaPredicted RBP8.27□□□□□ -1.08
DEFB1-201ENST00000297439 NWD1Q149M9 1564 aa8.27□□□□□ -1.09
DEFB1-201ENST00000297439 SNPHO15079 494 aa8.27□□□□□ -1.09
DEFB1-201ENST00000297439 FBLN1P23142 703 aa8.27□□□□□ -1.09
DEFB1-201ENST00000297439 SULT6B1Q6IMI4 303 aa8.27□□□□□ -1.09
DEFB1-201ENST00000297439 RPAP2Q8IXW5 612 aaPredicted RBP8.27□□□□□ -1.09
DEFB1-201ENST00000297439 C8orf58Q8NAV2 365 aa8.27□□□□□ -1.09
DEFB1-201ENST00000297439 GAS2L2Q8NHY3 880 aa8.27□□□□□ -1.09
DEFB1-201ENST00000297439 C22orf23Q9BZE7 217 aa8.27□□□□□ -1.09
DEFB1-201ENST00000297439 BCL11AQ9H165 835 aa8.27□□□□□ -1.09
DEFB1-201ENST00000297439 MAP3K19Q56UN5 1328 aa8.27□□□□□ -1.09
DEFB1-201ENST00000297439 PXDNLA1KZ92 1463 aa8.26□□□□□ -1.09
DEFB1-201ENST00000297439 THUMPD2Q9BTF0 503 aaKnown RBP8.26□□□□□ -1.09
DEFB1-201ENST00000297439 TMEM121BQ9BXQ6 578 aaPredicted RBP8.26□□□□□ -1.09
DEFB1-201ENST00000297439 TBC1D2Q9BYX2 928 aa8.26□□□□□ -1.09
DEFB1-201ENST00000297439 ADGRL3Q9HAR2 1447 aa8.26□□□□□ -1.09
DEFB1-201ENST00000297439 SIRT2Q8IXJ6 389 aa8.25□□□□□ -1.09
DEFB1-201ENST00000297439 ANKRD44Q8N8A2 993 aa8.25□□□□□ -1.09
DEFB1-201ENST00000297439 DCTPP1Q9H773 170 aa8.25□□□□□ -1.09
DEFB1-201ENST00000297439 NCAPD2Q15021 1401 aa8.25□□□□□ -1.09
DEFB1-201ENST00000297439 MED1Q15648 1581 aaPredicted RBP8.25□□□□□ -1.09
DEFB1-201ENST00000297439 CHD2O14647 1828 aaKnown RBP8.24□□□□□ -1.09
DEFB1-201ENST00000297439 MST1RQ04912 1400 aa8.24□□□□□ -1.09
DEFB1-201ENST00000297439 CHRM1P11229 460 aaPredicted RBP8.24□□□□□ -1.09
DEFB1-201ENST00000297439 SLC4A3P48751 1232 aa8.24□□□□□ -1.09
DEFB1-201ENST00000297439 HSP90AB2PQ58FF8 381 aa8.24□□□□□ -1.09
DEFB1-201ENST00000297439 AEBP1Q8IUX7 1158 aa8.24□□□□□ -1.09
DEFB1-201ENST00000297439 IL27Q8NEV9 243 aa8.24□□□□□ -1.09
DEFB1-201ENST00000297439 SLC26A8Q96RN1 970 aa8.24□□□□□ -1.09
DEFB1-201ENST00000297439 CHMP4AQ9BY43 222 aa8.24□□□□□ -1.09
DEFB1-201ENST00000297439 CIZ1Q9ULV3 898 aaPredicted RBP8.24□□□□□ -1.09
DEFB1-201ENST00000297439 FAM208AQ9UK61 1670 aaKnown RBP8.24□□□□□ -1.09
DEFB1-201ENST00000297439 NFAT5O94916 1531 aa8.24□□□□□ -1.09
DEFB1-201ENST00000297439 PLEKHG2Q9H7P9 1386 aa8.23□□□□□ -1.09
DEFB1-201ENST00000297439 OVOS2A0A0G2JMS6 1433 aa8.23□□□□□ -1.09
DEFB1-201ENST00000297439 FAM83GA6ND36 823 aa8.23□□□□□ -1.09
DEFB1-201ENST00000297439 DDIT3P35638 169 aa8.23□□□□□ -1.09
DEFB1-201ENST00000297439 CCT4P50991 539 aaKnown RBP8.23□□□□□ -1.09
DEFB1-201ENST00000297439 MKRN3Q13064 507 aaKnown RBP8.23□□□□□ -1.09
DEFB1-201ENST00000297439 PDCD7Q8N8D1 485 aaKnown RBP8.23□□□□□ -1.09
DEFB1-201ENST00000297439 CHMP5Q9NZZ3 219 aa8.23□□□□□ -1.09
DEFB1-201ENST00000297439 CACNA1FO60840 1977 aa8.22□□□□□ -1.09
DEFB1-201ENST00000297439 CAMTA1Q9Y6Y1 1673 aa8.22□□□□□ -1.09
DEFB1-201ENST00000297439 CDC45O75419 566 aa8.22□□□□□ -1.09
DEFB1-201ENST00000297439 NGDNQ8NEJ9 315 aaKnown RBP8.22□□□□□ -1.09
DEFB1-201ENST00000297439 LNPKQ9C0E8 428 aa8.22□□□□□ -1.09
DEFB1-201ENST00000297439 OSBPL3Q9H4L5 887 aa8.22□□□□□ -1.09
DEFB1-201ENST00000297439 MAP3K5Q99683 1374 aa8.22□□□□□ -1.09
DEFB1-201ENST00000297439 ADAMTSL3P82987 1691 aa8.21□□□□□ -1.09
DEFB1-201ENST00000297439 RGPD8O14715 1765 aaPredicted RBP8.21□□□□□ -1.1
DEFB1-201ENST00000297439 SLIT3O75094 1523 aa8.21□□□□□ -1.1
DEFB1-201ENST00000297439 HMMRO75330 724 aa8.21□□□□□ -1.1
DEFB1-201ENST00000297439 FRAT2O75474 233 aaPredicted RBP8.21□□□□□ -1.1
DEFB1-201ENST00000297439 HOXB7P09629 217 aa8.21□□□□□ -1.1
DEFB1-201ENST00000297439 HOXC9P31274 260 aa8.21□□□□□ -1.1
DEFB1-201ENST00000297439 CEBPAP49715 358 aaPredicted RBP8.21□□□□□ -1.1
DEFB1-201ENST00000297439 MTHFSDQ2M296 383 aaKnown RBP8.21□□□□□ -1.1
DEFB1-201ENST00000297439 ANKRD45Q5TZF3 282 aa8.21□□□□□ -1.1
DEFB1-201ENST00000297439 CEP85Q6P2H3 762 aa8.21□□□□□ -1.1
DEFB1-201ENST00000297439 HSCBQ8IWL3 235 aa8.21□□□□□ -1.1
DEFB1-201ENST00000297439 RTF1Q92541 710 aaKnown RBP8.21□□□□□ -1.1
DEFB1-201ENST00000297439 L3MBTL3Q96JM7 780 aaPredicted RBP8.21□□□□□ -1.1
DEFB1-201ENST00000297439 EYA1Q99502 592 aa8.21□□□□□ -1.1
DEFB1-201ENST00000297439 MSH6P52701 1360 aa8.21□□□□□ -1.1
DEFB1-201ENST00000297439 CEMIPQ8WUJ3 1361 aa8.21□□□□□ -1.1
DEFB1-201ENST00000297439 IBTKQ9P2D0 1353 aaPredicted RBP8.21□□□□□ -1.1
DEFB1-201ENST00000297439 ABCC6O95255 1503 aa8.2□□□□□ -1.1
DEFB1-201ENST00000297439 KCNA6P17658 529 aa8.2□□□□□ -1.1
DEFB1-201ENST00000297439 PTMSP20962 102 aa8.2□□□□□ -1.1
DEFB1-201ENST00000297439 PSEN1P49768 467 aa8.2□□□□□ -1.1
DEFB1-201ENST00000297439 MFAP1P55081 439 aaKnown RBP8.2□□□□□ -1.1
DEFB1-201ENST00000297439 DCTN1Q14203 1278 aa8.2□□□□□ -1.1
DEFB1-201ENST00000297439 C3orf67Q6ZVT6 689 aa8.2□□□□□ -1.1
DEFB1-201ENST00000297439 PLEKHM2Q8IWE5 1019 aa8.2□□□□□ -1.1
DEFB1-201ENST00000297439 ISY1Q9ULR0 285 aaKnown RBP8.2□□□□□ -1.1
DEFB1-201ENST00000297439 LMO7Q8WWI1 1683 aa8.19□□□□□ -1.1
DEFB1-201ENST00000297439 GNAT3A8MTJ3 354 aa8.19□□□□□ -1.1
DEFB1-201ENST00000297439 EPB41L2O43491 1005 aaKnown RBP8.19□□□□□ -1.1
DEFB1-201ENST00000297439 AMPHP49418 695 aa8.19□□□□□ -1.1
DEFB1-201ENST00000297439 NLRP6P59044 892 aa8.19□□□□□ -1.1
DEFB1-201ENST00000297439 TTC22Q5TAA0 569 aa8.19□□□□□ -1.1
DEFB1-201ENST00000297439 CCDC30Q5VVM6 783 aa8.19□□□□□ -1.1
DEFB1-201ENST00000297439 CLEC17AQ6ZS10 378 aa8.19□□□□□ -1.1
DEFB1-201ENST00000297439 TBC1D9Q6ZT07 1266 aa8.19□□□□□ -1.1
DEFB1-201ENST00000297439 MCM10Q7L590 875 aa8.19□□□□□ -1.1
DEFB1-201ENST00000297439 VSIG10Q8N0Z9 540 aa8.19□□□□□ -1.1
DEFB1-201ENST00000297439 KCNH5Q8NCM2 988 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms