RNA–Protein interactions for RNA: ENST00000296799.8

ARHGEF28-202, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ARHGEF28, Length 4,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-202ENST00000296799 ANKRD20A12PQ8NF67 263 aa18.03■□□□□ 0.48
ARHGEF28-202ENST00000296799 ATP5J2-PTCD1G3V325 749 aa18.03■□□□□ 0.48
ARHGEF28-202ENST00000296799 TPM2P07951 284 aa18.03■□□□□ 0.48
ARHGEF28-202ENST00000296799 CTNNA3Q9UI47 895 aa18.03■□□□□ 0.48
ARHGEF28-202ENST00000296799 GPTP24298 496 aa18.02■□□□□ 0.48
ARHGEF28-202ENST00000296799 RNF214Q8ND24 703 aa18.02■□□□□ 0.48
ARHGEF28-202ENST00000296799 ARID3AQ99856 593 aa18.02■□□□□ 0.48
ARHGEF28-202ENST00000296799 RAI14Q9P0K7 980 aa18.02■□□□□ 0.48
ARHGEF28-202ENST00000296799 SNRPA1P09661 255 aaKnown RBP18.02■□□□□ 0.48
ARHGEF28-202ENST00000296799 AKAP2Q9Y2D5 859 aa18.02■□□□□ 0.48
ARHGEF28-202ENST00000296799 ZPR1O75312 459 aa18.02■□□□□ 0.47
ARHGEF28-202ENST00000296799 HSP90AB3PQ58FF7 597 aa18.02■□□□□ 0.47
ARHGEF28-202ENST00000296799 UPF3BQ9BZI7 483 aaKnown RBP18.02■□□□□ 0.47
ARHGEF28-202ENST00000296799 ATP7AQ04656 1500 aa18.02■□□□□ 0.47
ARHGEF28-202ENST00000296799 GCP02774 474 aa18.01■□□□□ 0.47
ARHGEF28-202ENST00000296799 C8orf58Q8NAV2 365 aa18.01■□□□□ 0.47
ARHGEF28-202ENST00000296799 LRRC59Q96AG4 307 aaKnown RBP18.01■□□□□ 0.47
ARHGEF28-202ENST00000296799 UBE3BQ7Z3V4 1068 aa18.01■□□□□ 0.47
ARHGEF28-202ENST00000296799 TDO2P48775 406 aa18.01■□□□□ 0.47
ARHGEF28-202ENST00000296799 CEBPZQ03701 1054 aaKnown RBP18.01■□□□□ 0.47
ARHGEF28-202ENST00000296799 FLT4P35916 1363 aa18.01■□□□□ 0.47
ARHGEF28-202ENST00000296799 KRT32Q14532 448 aa18■□□□□ 0.47
ARHGEF28-202ENST00000296799 ARHGAP45Q92619 1136 aa18■□□□□ 0.47
ARHGEF28-202ENST00000296799 PHACTR3Q96KR7 559 aa18■□□□□ 0.47
ARHGEF28-202ENST00000296799 ATP10AO60312 1499 aa18■□□□□ 0.47
ARHGEF28-202ENST00000296799 LARP1BQ659C4 914 aaKnown RBP18■□□□□ 0.47
ARHGEF28-202ENST00000296799 TEX13AQ9BXU3 409 aaPredicted RBP18■□□□□ 0.47
ARHGEF28-202ENST00000296799 PIK3R4Q99570 1358 aa18■□□□□ 0.47
ARHGEF28-202ENST00000296799 IFIT1P09914 478 aaKnown RBP18■□□□□ 0.47
ARHGEF28-202ENST00000296799 SLC39A6Q13433 755 aa18■□□□□ 0.47
ARHGEF28-202ENST00000296799 MTHFSDQ2M296 383 aaKnown RBP18■□□□□ 0.47
ARHGEF28-202ENST00000296799 TARBP1Q13395 1621 aaKnown RBP18■□□□□ 0.47
ARHGEF28-202ENST00000296799 PDRG1Q9NUG6 133 aa17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 IGHDP01880 384 aa17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 ZCRB1Q8TBF4 217 aaKnown RBP17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 ANKRD13DQ6ZTN6 518 aa17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 PPP1R42Q7Z4L9 355 aa17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 PCMTD1Q96MG8 357 aaPredicted RBP17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 EIF2AK4Q9P2K8 1649 aaKnown RBP17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 MAP3K19Q56UN5 1328 aa17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 WDR33Q9C0J8 1336 aaKnown RBP17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 KINO60870 393 aaKnown RBP17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 ATP2B2Q01814 1243 aa17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 TRIM22Q8IYM9 498 aa17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 EYA1Q99502 592 aa17.99■□□□□ 0.47
ARHGEF28-202ENST00000296799 MAGI3Q5TCQ9 1506 aa17.98■□□□□ 0.47
ARHGEF28-202ENST00000296799 STK38Q15208 465 aa17.98■□□□□ 0.47
ARHGEF28-202ENST00000296799 MEIS3Q99687 375 aa17.98■□□□□ 0.47
ARHGEF28-202ENST00000296799 AIDAQ96BJ3 306 aa17.98■□□□□ 0.47
ARHGEF28-202ENST00000296799 CCDC43Q96MW1 224 aaKnown RBP17.97■□□□□ 0.47
ARHGEF28-202ENST00000296799 CEP89Q96ST8 783 aa17.97■□□□□ 0.47
ARHGEF28-202ENST00000296799 AKAP4Q5JQC9 854 aa17.97■□□□□ 0.47
ARHGEF28-202ENST00000296799 NOC3LQ8WTT2 800 aaKnown RBP17.97■□□□□ 0.47
ARHGEF28-202ENST00000296799 NUP133Q8WUM0 1156 aa17.97■□□□□ 0.47
ARHGEF28-202ENST00000296799 CHPF2Q9P2E5 772 aa17.97■□□□□ 0.47
ARHGEF28-202ENST00000296799 UHRF1BP1Q6BDS2 1440 aa17.97■□□□□ 0.47
ARHGEF28-202ENST00000296799 ABCC1P33527 1531 aa17.97■□□□□ 0.47
ARHGEF28-202ENST00000296799 IPO7O95373 1038 aaKnown RBP17.97■□□□□ 0.47
ARHGEF28-202ENST00000296799 PCDHB15Q9Y5E8 787 aa17.97■□□□□ 0.47
ARHGEF28-202ENST00000296799 CASTP20810 708 aaKnown RBP17.96■□□□□ 0.47
ARHGEF28-202ENST00000296799 MRE11P49959 708 aa17.96■□□□□ 0.47
ARHGEF28-202ENST00000296799 TOM1O60784 492 aa17.96■□□□□ 0.47
ARHGEF28-202ENST00000296799 HMGB2P26583 209 aaKnown RBP17.96■□□□□ 0.47
ARHGEF28-202ENST00000296799 CCDC69A6NI79 296 aa17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 ZSCAN31Q96LW9 406 aaPredicted RBP17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 ECHDC1Q9NTX5 307 aa17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 PIK3C2GO75747 1445 aa17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 NASPP49321 788 aaPredicted RBP17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 PDE4CQ08493 712 aa17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 PRPF40BQ6NWY9 871 aaKnown RBP17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 JARID2Q92833 1246 aaPredicted RBP17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 ZNF396Q96N95 335 aaPredicted RBP17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 UBAC1Q9BSL1 405 aa17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 CWC25Q9NXE8 425 aaPredicted RBP17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 UBAP1LF5GYI3 381 aa17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 LDHAL6AQ6ZMR3 332 aa17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 COPS6Q7L5N1 327 aa17.95■□□□□ 0.46
ARHGEF28-202ENST00000296799 RBM5P52756 815 aaKnown RBP eCLIP17.94■□□□□ 0.46
ARHGEF28-202ENST00000296799 KRT85P78386 507 aa17.94■□□□□ 0.46
ARHGEF28-202ENST00000296799 IMMTQ16891 758 aaKnown RBP17.94■□□□□ 0.46
ARHGEF28-202ENST00000296799 TSPYL6Q8N831 410 aa17.94■□□□□ 0.46
ARHGEF28-202ENST00000296799 ANKRD18BA2A2Z9 1011 aa17.94■□□□□ 0.46
ARHGEF28-202ENST00000296799 KRT24Q2M2I5 525 aa17.94■□□□□ 0.46
ARHGEF28-202ENST00000296799 CAVIN4Q5BKX8 364 aa17.94■□□□□ 0.46
ARHGEF28-202ENST00000296799 XAGE3Q8WTP9 111 aa17.94■□□□□ 0.46
ARHGEF28-202ENST00000296799 U3KPZ7 1027 aaPredicted RBP17.94■□□□□ 0.46
ARHGEF28-202ENST00000296799 PLEKHH1Q9ULM0 1364 aa17.94■□□□□ 0.46
ARHGEF28-202ENST00000296799 CIZ1Q9ULV3 898 aaPredicted RBP17.93■□□□□ 0.46
ARHGEF28-202ENST00000296799 COL17A1Q9UMD9 1497 aaPredicted RBP17.93■□□□□ 0.46
ARHGEF28-202ENST00000296799 BMP2KLQ5H9B9 411 aa17.93■□□□□ 0.46
ARHGEF28-202ENST00000296799 NAT10Q9H0A0 1025 aaKnown RBP17.93■□□□□ 0.46
ARHGEF28-202ENST00000296799 VAMP4O75379 141 aa17.93■□□□□ 0.46
ARHGEF28-202ENST00000296799 CCAR2Q8N163 923 aaKnown RBP17.92■□□□□ 0.46
ARHGEF28-202ENST00000296799 JMYQ8N9B5 988 aa17.92■□□□□ 0.46
ARHGEF28-202ENST00000296799 ZNF592Q92610 1267 aa17.92■□□□□ 0.46
ARHGEF28-202ENST00000296799 OLFM4Q6UX06 510 aa17.92■□□□□ 0.46
ARHGEF28-202ENST00000296799 NFATC2IPQ8NCF5 419 aa17.92■□□□□ 0.46
ARHGEF28-202ENST00000296799 ORAI2Q96SN7 254 aa17.92■□□□□ 0.46
ARHGEF28-202ENST00000296799 CFAP65Q6ZU64 1925 aaKnown RBP17.92■□□□□ 0.46
ARHGEF28-202ENST00000296799 ME1P48163 572 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms