RNA–Protein interactions for RNA: ENST00000295400.10

TGFA-201, Transcript of transforming growth factor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFA, Length 4,310 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-201ENST00000295400 NECAB1Q8N987 351 aa13.84□□□□□ -0.19
TGFA-201ENST00000295400 UGGT1Q9NYU2 1555 aa13.84□□□□□ -0.19
TGFA-201ENST00000295400 CKAP2LQ8IYA6 745 aa13.84□□□□□ -0.19
TGFA-201ENST00000295400 RAB11FIP3O75154 756 aa13.83□□□□□ -0.19
TGFA-201ENST00000295400 CPA1P15085 419 aa13.83□□□□□ -0.19
TGFA-201ENST00000295400 GUCY1B3Q02153 619 aa13.83□□□□□ -0.19
TGFA-201ENST00000295400 NPC1L1Q9UHC9 1359 aa13.83□□□□□ -0.19
TGFA-201ENST00000295400 KRT85P78386 507 aa13.83□□□□□ -0.2
TGFA-201ENST00000295400 KLHL40Q2TBA0 621 aa13.83□□□□□ -0.2
TGFA-201ENST00000295400 SYNE3Q6ZMZ3 975 aa13.83□□□□□ -0.2
TGFA-201ENST00000295400 TNMDQ9H2S6 317 aa13.83□□□□□ -0.2
TGFA-201ENST00000295400 PA2G4Q9UQ80 394 aaKnown RBP13.83□□□□□ -0.2
TGFA-201ENST00000295400 WDR7Q9Y4E6 1490 aa13.83□□□□□ -0.2
TGFA-201ENST00000295400 PTPRCP08575 1304 aa13.83□□□□□ -0.2
TGFA-201ENST00000295400 PRIM1P49642 420 aaKnown RBP13.83□□□□□ -0.2
TGFA-201ENST00000295400 CHMP4CQ96CF2 233 aa13.83□□□□□ -0.2
TGFA-201ENST00000295400 PHAXQ9H814 394 aaKnown RBP13.83□□□□□ -0.2
TGFA-201ENST00000295400 CHPF2Q9P2E5 772 aa13.83□□□□□ -0.2
TGFA-201ENST00000295400 GLRX3O76003 335 aaKnown RBP13.82□□□□□ -0.2
TGFA-201ENST00000295400 ERC1Q8IUD2 1116 aa13.82□□□□□ -0.2
TGFA-201ENST00000295400 EIF2AK4Q9P2K8 1649 aaKnown RBP13.82□□□□□ -0.2
TGFA-201ENST00000295400 ATP5J2-PTCD1G3V325 749 aa13.82□□□□□ -0.2
TGFA-201ENST00000295400 TATP17735 454 aaPredicted RBP13.82□□□□□ -0.2
TGFA-201ENST00000295400 PDCP20941 246 aa13.82□□□□□ -0.2
TGFA-201ENST00000295400 RAB3GAP1Q15042 981 aa13.82□□□□□ -0.2
TGFA-201ENST00000295400 MYD88Q99836 296 aa13.82□□□□□ -0.2
TGFA-201ENST00000295400 MTMR7Q9Y216 660 aa13.82□□□□□ -0.2
TGFA-201ENST00000295400 CPLX2Q6PUV4 134 aaKnown RBP13.82□□□□□ -0.2
TGFA-201ENST00000295400 SPATA32Q96LK8 384 aa13.82□□□□□ -0.2
TGFA-201ENST00000295400 MAP3K2Q9Y2U5 619 aa13.82□□□□□ -0.2
TGFA-201ENST00000295400 IL13P35225 146 aa13.81□□□□□ -0.2
TGFA-201ENST00000295400 ME1P48163 572 aa13.81□□□□□ -0.2
TGFA-201ENST00000295400 RHPN1Q8TCX5 695 aa13.81□□□□□ -0.2
TGFA-201ENST00000295400 SNX21Q969T3 373 aa13.81□□□□□ -0.2
TGFA-201ENST00000295400 CABP4P57796 275 aa13.81□□□□□ -0.2
TGFA-201ENST00000295400 RRP12Q5JTH9 1297 aaKnown RBP13.81□□□□□ -0.2
TGFA-201ENST00000295400 FILIP1Q7Z7B0 1213 aa13.81□□□□□ -0.2
TGFA-201ENST00000295400 LRRC59Q96AG4 307 aaKnown RBP13.81□□□□□ -0.2
TGFA-201ENST00000295400 EYA1Q99502 592 aa13.81□□□□□ -0.2
TGFA-201ENST00000295400 CCDC192P0DO97 292 aa13.81□□□□□ -0.2
TGFA-201ENST00000295400 TPD52L1Q16890 204 aaPredicted RBP13.81□□□□□ -0.2
TGFA-201ENST00000295400 KINO60870 393 aaKnown RBP13.81□□□□□ -0.2
TGFA-201ENST00000295400 HCLS1P14317 486 aaPredicted RBP13.81□□□□□ -0.2
TGFA-201ENST00000295400 SLC39A6Q13433 755 aa13.81□□□□□ -0.2
TGFA-201ENST00000295400 ESYT1Q9BSJ8 1104 aa13.81□□□□□ -0.2
TGFA-201ENST00000295400 USP26Q9BXU7 913 aa13.81□□□□□ -0.2
TGFA-201ENST00000295400 PHF8Q9UPP1 1060 aa13.81□□□□□ -0.2
TGFA-201ENST00000295400 PRKCSHP14314 528 aaPredicted RBP13.8□□□□□ -0.2
TGFA-201ENST00000295400 TRIM29Q14134 588 aa13.8□□□□□ -0.2
TGFA-201ENST00000295400 TPM2P07951 284 aa13.8□□□□□ -0.2
TGFA-201ENST00000295400 GIMAP6Q6P9H5 292 aa13.8□□□□□ -0.2
TGFA-201ENST00000295400 LRRC2Q9BYS8 371 aa13.8□□□□□ -0.2
TGFA-201ENST00000295400 AKAP17AQ02040 695 aaKnown RBP13.79□□□□□ -0.2
TGFA-201ENST00000295400 LIMCH1Q9UPQ0 1083 aa13.79□□□□□ -0.2
TGFA-201ENST00000295400 RAB11FIP4Q86YS3 637 aa13.79□□□□□ -0.2
TGFA-201ENST00000295400 SMC2O95347 1197 aa13.79□□□□□ -0.2
TGFA-201ENST00000295400 CD2BP2O95400 341 aaKnown RBP13.79□□□□□ -0.2
TGFA-201ENST00000295400 PKP1Q13835 747 aa13.79□□□□□ -0.2
TGFA-201ENST00000295400 CNPY2Q9Y2B0 182 aa13.79□□□□□ -0.2
TGFA-201ENST00000295400 MAST1Q9Y2H9 1570 aa13.79□□□□□ -0.2
TGFA-201ENST00000295400 MAP3K19Q56UN5 1328 aa13.79□□□□□ -0.2
TGFA-201ENST00000295400 GJB2P29033 226 aa13.78□□□□□ -0.2
TGFA-201ENST00000295400 NUP62CLQ9H1M0 184 aa13.78□□□□□ -0.2
TGFA-201ENST00000295400 ATP10AO60312 1499 aa13.78□□□□□ -0.2
TGFA-201ENST00000295400 ZNF518AQ6AHZ1 1483 aa13.78□□□□□ -0.2
TGFA-201ENST00000295400 TOM1L2Q6ZVM7 507 aa13.78□□□□□ -0.2
TGFA-201ENST00000295400 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.78□□□□□ -0.2
TGFA-201ENST00000295400 MSH6P52701 1360 aa13.78□□□□□ -0.2
TGFA-201ENST00000295400 YTHDC2Q9H6S0 1430 aaKnown RBP13.78□□□□□ -0.2
TGFA-201ENST00000295400 RBM25P49756 843 aaKnown RBP13.78□□□□□ -0.2
TGFA-201ENST00000295400 CCT2P78371 535 aaKnown RBP13.78□□□□□ -0.2
TGFA-201ENST00000295400 STK38Q15208 465 aa13.78□□□□□ -0.2
TGFA-201ENST00000295400 CWF19L2Q2TBE0 894 aaKnown RBP13.78□□□□□ -0.2
TGFA-201ENST00000295400 HIP1O00291 1037 aa13.77□□□□□ -0.2
TGFA-201ENST00000295400 STX6O43752 255 aa13.77□□□□□ -0.2
TGFA-201ENST00000295400 ABCC2Q92887 1545 aa13.77□□□□□ -0.2
TGFA-201ENST00000295400 ERVK-7P63135 1459 aa13.77□□□□□ -0.2
TGFA-201ENST00000295400 PNMA6EA0A0J9YXQ4 647 aa13.77□□□□□ -0.21
TGFA-201ENST00000295400 ANKLE2Q86XL3 938 aa13.77□□□□□ -0.21
TGFA-201ENST00000295400 SNRKQ9NRH2 765 aa13.77□□□□□ -0.21
TGFA-201ENST00000295400 ECHDC1Q9NTX5 307 aa13.77□□□□□ -0.21
TGFA-201ENST00000295400 GSPT1P15170 499 aaKnown RBP13.77□□□□□ -0.21
TGFA-201ENST00000295400 PDILTQ8N807 584 aa13.77□□□□□ -0.21
TGFA-201ENST00000295400 LRRFIP1Q32MZ4 808 aaKnown RBP13.76□□□□□ -0.21
TGFA-201ENST00000295400 ZNF771Q7L3S4 317 aaPredicted RBP13.76□□□□□ -0.21
TGFA-201ENST00000295400 USP48Q86UV5 1035 aa13.76□□□□□ -0.21
TGFA-201ENST00000295400 DBF4Q9UBU7 674 aaPredicted RBP13.76□□□□□ -0.21
TGFA-201ENST00000295400 SAMD9LQ8IVG5 1584 aa13.76□□□□□ -0.21
TGFA-201ENST00000295400 ATP8B2P98198 1209 aa13.76□□□□□ -0.21
TGFA-201ENST00000295400 CHRNA2Q15822 529 aa13.76□□□□□ -0.21
TGFA-201ENST00000295400 PLEKHF1Q96S99 279 aa13.76□□□□□ -0.21
TGFA-201ENST00000295400 LETM1O95202 739 aaPredicted RBP13.76□□□□□ -0.21
TGFA-201ENST00000295400 UBE3BQ7Z3V4 1068 aa13.76□□□□□ -0.21
TGFA-201ENST00000295400 PRDM10Q9NQV6 1147 aa13.76□□□□□ -0.21
TGFA-201ENST00000295400 INSRP06213 1382 aa13.76□□□□□ -0.21
TGFA-201ENST00000295400 CLCN1P35523 988 aa13.75□□□□□ -0.21
TGFA-201ENST00000295400 FAM177A1Q8N128 213 aaPredicted RBP13.75□□□□□ -0.21
TGFA-201ENST00000295400 NPATQ14207 1427 aa13.75□□□□□ -0.21
TGFA-201ENST00000295400 RIMS2Q9UQ26 1411 aa13.75□□□□□ -0.21
TGFA-201ENST00000295400 TTC39AQ5SRH9 613 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms