RNA–Protein interactions for RNA: ENST00000286301.7

CSF1R-201, Transcript of colony stimulating factor 1 receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF1R, Length 3,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-201ENST00000286301 OTUD7AQ8TE49 926 aaPredicted RBP11.47□□□□□ -0.57
CSF1R-201ENST00000286301 CDK12Q9NYV4 1490 aaPredicted RBP11.47□□□□□ -0.57
CSF1R-201ENST00000286301 CABP4P57796 275 aa11.47□□□□□ -0.57
CSF1R-201ENST00000286301 PTPRCP08575 1304 aa11.47□□□□□ -0.57
CSF1R-201ENST00000286301 NUTM1Q86Y26 1132 aa11.47□□□□□ -0.57
CSF1R-201ENST00000286301 MAP3K5Q99683 1374 aa11.47□□□□□ -0.57
CSF1R-201ENST00000286301 DDX58O95786 925 aaKnown RBP11.46□□□□□ -0.57
CSF1R-201ENST00000286301 NCBP3Q53F19 620 aaKnown RBP11.46□□□□□ -0.57
CSF1R-201ENST00000286301 TAOK2Q9UL54 1235 aa11.46□□□□□ -0.57
CSF1R-201ENST00000286301 MSH6P52701 1360 aa11.46□□□□□ -0.57
CSF1R-201ENST00000286301 AMOTQ4VCS5 1084 aa11.46□□□□□ -0.57
CSF1R-201ENST00000286301 SPG7Q9UQ90 795 aa11.46□□□□□ -0.57
CSF1R-201ENST00000286301 DLC1Q96QB1 1528 aa11.46□□□□□ -0.58
CSF1R-201ENST00000286301 LRRCC1Q9C099 1032 aa11.46□□□□□ -0.58
CSF1R-201ENST00000286301 NFATC2IPQ8NCF5 419 aa11.45□□□□□ -0.58
CSF1R-201ENST00000286301 MAP2P11137 1827 aaKnown RBP11.45□□□□□ -0.58
CSF1R-201ENST00000286301 IQSEC2Q5JU85 1478 aa11.45□□□□□ -0.58
CSF1R-201ENST00000286301 KIAA1211Q6ZU35 1233 aa11.45□□□□□ -0.58
CSF1R-201ENST00000286301 IGSF1Q8N6C5 1336 aa11.45□□□□□ -0.58
CSF1R-201ENST00000286301 NPHP4O75161 1426 aaPredicted RBP11.45□□□□□ -0.58
CSF1R-201ENST00000286301 FOXD4L6Q3SYB3 417 aaPredicted RBP11.45□□□□□ -0.58
CSF1R-201ENST00000286301 INTS3Q68E01 1043 aaKnown RBP11.45□□□□□ -0.58
CSF1R-201ENST00000286301 CEP85Q6P2H3 762 aa11.45□□□□□ -0.58
CSF1R-201ENST00000286301 FOXD4L3Q6VB84 417 aaPredicted RBP11.45□□□□□ -0.58
CSF1R-201ENST00000286301 MED14O60244 1454 aa11.45□□□□□ -0.58
CSF1R-201ENST00000286301 TBC1D9Q6ZT07 1266 aa11.44□□□□□ -0.58
CSF1R-201ENST00000286301 TMEM94Q12767 1356 aa11.44□□□□□ -0.58
CSF1R-201ENST00000286301 MCCP23508 829 aa11.44□□□□□ -0.58
CSF1R-201ENST00000286301 ANKRD44Q8N8A2 993 aa11.44□□□□□ -0.58
CSF1R-201ENST00000286301 DNAAF4Q8WXU2 420 aa11.44□□□□□ -0.58
CSF1R-201ENST00000286301 PIK3R4Q99570 1358 aa11.44□□□□□ -0.58
CSF1R-201ENST00000286301 AKAP4Q5JQC9 854 aa11.44□□□□□ -0.58
CSF1R-201ENST00000286301 TBC1D2Q9BYX2 928 aa11.44□□□□□ -0.58
CSF1R-201ENST00000286301 ARHGEF10O15013 1369 aa11.44□□□□□ -0.58
CSF1R-201ENST00000286301 USP19O94966 1318 aa11.44□□□□□ -0.58
CSF1R-201ENST00000286301 NPHP3Q7Z494 1330 aa11.44□□□□□ -0.58
CSF1R-201ENST00000286301 PANK2Q9BZ23 570 aa11.43□□□□□ -0.58
CSF1R-201ENST00000286301 AXIN2Q9Y2T1 843 aa11.43□□□□□ -0.58
CSF1R-201ENST00000286301 MAP3K2Q9Y2U5 619 aa11.43□□□□□ -0.58
CSF1R-201ENST00000286301 IFIT2P09913 472 aaKnown RBP11.43□□□□□ -0.58
CSF1R-201ENST00000286301 RBM10P98175 930 aaKnown RBP11.43□□□□□ -0.58
CSF1R-201ENST00000286301 TBC1D32Q96NH3 1257 aa11.43□□□□□ -0.58
CSF1R-201ENST00000286301 NUTM2BA6NNL0 878 aaPredicted RBP11.43□□□□□ -0.58
CSF1R-201ENST00000286301 NUTM2EB1AL46 878 aaPredicted RBP11.43□□□□□ -0.58
CSF1R-201ENST00000286301 NUTM2AQ8IVF1 878 aaPredicted RBP11.43□□□□□ -0.58
CSF1R-201ENST00000286301 RBM42Q9BTD8 480 aaKnown RBP11.43□□□□□ -0.58
CSF1R-201ENST00000286301 KIF13AQ9H1H9 1805 aa11.43□□□□□ -0.58
CSF1R-201ENST00000286301 DBF4Q9UBU7 674 aaPredicted RBP11.43□□□□□ -0.58
CSF1R-201ENST00000286301 TECPR2O15040 1411 aa11.43□□□□□ -0.58
CSF1R-201ENST00000286301 CDC42BPGQ6DT37 1551 aa11.42□□□□□ -0.58
CSF1R-201ENST00000286301 G3BP1Q13283 466 aaKnown RBP eCLIP11.42□□□□□ -0.58
CSF1R-201ENST00000286301 CWF19L2Q2TBE0 894 aaKnown RBP11.42□□□□□ -0.58
CSF1R-201ENST00000286301 PPP1R42Q7Z4L9 355 aa11.42□□□□□ -0.58
CSF1R-201ENST00000286301 SIRT2Q8IXJ6 389 aa11.42□□□□□ -0.58
CSF1R-201ENST00000286301 ABCC4O15439 1325 aa11.42□□□□□ -0.58
CSF1R-201ENST00000286301 PRAMEF22A3QJZ6 481 aa11.42□□□□□ -0.58
CSF1R-201ENST00000286301 RNMTO43148 476 aaKnown RBP11.42□□□□□ -0.58
CSF1R-201ENST00000286301 REC8O95072 547 aa11.42□□□□□ -0.58
CSF1R-201ENST00000286301 BMP2KLQ5H9B9 411 aa11.42□□□□□ -0.58
CSF1R-201ENST00000286301 CCDC85AQ96PX6 553 aaPredicted RBP11.42□□□□□ -0.58
CSF1R-201ENST00000286301 ATP5J2-PTCD1G3V325 749 aa11.41□□□□□ -0.58
CSF1R-201ENST00000286301 GOLGA6L22H0YM25 854 aa11.41□□□□□ -0.58
CSF1R-201ENST00000286301 HTATSF1O43719 755 aaKnown RBP11.41□□□□□ -0.58
CSF1R-201ENST00000286301 PIP4K2BP78356 416 aa11.41□□□□□ -0.58
CSF1R-201ENST00000286301 ARHGEF25Q86VW2 580 aa11.41□□□□□ -0.58
CSF1R-201ENST00000286301 COL3A1P02461 1466 aaPredicted RBP11.41□□□□□ -0.58
CSF1R-201ENST00000286301 DCTPP1Q9H773 170 aa11.41□□□□□ -0.58
CSF1R-201ENST00000286301 ADAMTS2O95450 1211 aa11.41□□□□□ -0.58
CSF1R-201ENST00000286301 CLASRPQ8N2M8 674 aaKnown RBP11.41□□□□□ -0.58
CSF1R-201ENST00000286301 NAP1L2Q9ULW6 460 aaPredicted RBP11.41□□□□□ -0.58
CSF1R-201ENST00000286301 PNMA6EA0A0J9YXQ4 647 aa11.4□□□□□ -0.58
CSF1R-201ENST00000286301 IFNL2Q8IZJ0 200 aa11.4□□□□□ -0.58
CSF1R-201ENST00000286301 MYD88Q99836 296 aa11.4□□□□□ -0.58
CSF1R-201ENST00000286301 OVOS2A0A0J9YW53 1432 aa11.4□□□□□ -0.58
CSF1R-201ENST00000286301 OVOS2Q6IE36 1432 aa11.4□□□□□ -0.58
CSF1R-201ENST00000286301 FAM177BA6PVY3 158 aa11.4□□□□□ -0.58
CSF1R-201ENST00000286301 ST18O60284 1047 aa11.4□□□□□ -0.58
CSF1R-201ENST00000286301 TAF7LQ5H9L4 462 aa11.4□□□□□ -0.58
CSF1R-201ENST00000286301 GPATCH3Q96I76 525 aa11.4□□□□□ -0.58
CSF1R-201ENST00000286301 REREQ9P2R6 1566 aa11.4□□□□□ -0.58
CSF1R-201ENST00000286301 PLEKHM2Q8IWE5 1019 aa11.4□□□□□ -0.59
CSF1R-201ENST00000286301 DIAPH3Q9NSV4 1193 aa11.4□□□□□ -0.59
CSF1R-201ENST00000286301 HDAC5Q9UQL6 1122 aa11.4□□□□□ -0.59
CSF1R-201ENST00000286301 SDSP20132 328 aa11.39□□□□□ -0.59
CSF1R-201ENST00000286301 MX1P20591 662 aa11.39□□□□□ -0.59
CSF1R-201ENST00000286301 DNAJC5Q9H3Z4 198 aa11.39□□□□□ -0.59
CSF1R-201ENST00000286301 NBPF7P0C2Y1 421 aaPredicted RBP11.39□□□□□ -0.59
CSF1R-201ENST00000286301 FGD1P98174 961 aa11.39□□□□□ -0.59
CSF1R-201ENST00000286301 EIF4A1P60842 406 aaKnown RBP11.39□□□□□ -0.59
CSF1R-201ENST00000286301 PA2G4Q9UQ80 394 aaKnown RBP11.39□□□□□ -0.59
CSF1R-201ENST00000286301 NEK4P51957 841 aa11.38□□□□□ -0.59
CSF1R-201ENST00000286301 GORABQ5T7V8 394 aa11.38□□□□□ -0.59
CSF1R-201ENST00000286301 COPS6Q7L5N1 327 aa11.38□□□□□ -0.59
CSF1R-201ENST00000286301 NEUROD6Q96NK8 337 aa11.38□□□□□ -0.59
CSF1R-201ENST00000286301 RRP9O43818 475 aaKnown RBP11.38□□□□□ -0.59
CSF1R-201ENST00000286301 TTC22Q5TAA0 569 aa11.38□□□□□ -0.59
CSF1R-201ENST00000286301 CHMP5Q9NZZ3 219 aa11.38□□□□□ -0.59
CSF1R-201ENST00000286301 SHPRHQ149N8 1683 aa11.38□□□□□ -0.59
CSF1R-201ENST00000286301 XAGE3Q8WTP9 111 aa11.38□□□□□ -0.59
CSF1R-201ENST00000286301 USP31Q70CQ4 1352 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms